Odup022499.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ochropacha duplaris
Gene Symbol
-
Assembly
GCA_951361185.1
Location
OX592717.1:2085641-2092718[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 40 0.16 11 7.2 0.8 1 20 68 87 68 89 0.95
2 40 0.075 5.5 8.2 0.2 2 23 117 138 117 138 0.95
3 40 0.0024 0.17 13.0 0.1 2 23 161 182 160 182 0.96
4 40 0.037 2.7 9.2 0.1 1 23 186 208 186 208 0.95
5 40 0.021 1.5 10.0 0.1 1 23 213 236 213 236 0.86
6 40 0.0024 0.18 12.9 0.3 1 23 242 265 242 265 0.96
7 40 0.0049 0.36 12.0 1.1 1 23 272 295 272 295 0.97
8 40 6.3e-06 0.00046 21.1 1.7 1 23 302 324 302 324 0.97
9 40 6.7e-06 0.00049 21.0 3.1 1 23 330 352 330 352 0.98
10 40 0.025 1.8 9.7 0.5 1 23 430 453 430 453 0.94
11 40 0.36 27 6.1 0.2 2 23 480 501 479 501 0.96
12 40 9.4 6.9e+02 1.6 4.0 1 23 523 545 523 545 0.97
13 40 4.7e-06 0.00035 21.5 0.7 1 23 549 571 549 571 0.98
14 40 9 6.6e+02 1.7 0.3 1 20 576 595 576 599 0.72
15 40 0.35 26 6.1 0.3 1 23 605 628 605 628 0.86
16 40 0.63 46 5.3 2.3 1 15 635 649 635 656 0.86
17 40 0.91 67 4.8 0.1 1 23 704 726 704 726 0.91
18 40 4.6 3.4e+02 2.6 0.0 3 23 752 773 750 773 0.89
19 40 0.00024 0.018 16.1 1.7 1 23 795 817 795 817 0.99
20 40 2.4e-05 0.0017 19.2 1.5 1 23 821 843 821 843 0.98
21 40 0.077 5.6 8.2 0.4 1 21 848 868 848 871 0.89
22 40 0.15 11 7.3 0.1 1 23 912 934 912 934 0.96
23 40 4.6 3.4e+02 2.6 0.1 2 23 958 980 957 980 0.95
24 40 0.0021 0.15 13.2 1.3 1 23 1002 1024 1002 1024 0.97
25 40 0.0077 0.56 11.4 0.4 1 23 1028 1050 1028 1050 0.95
26 40 0.065 4.8 8.4 1.2 1 23 1057 1080 1057 1080 0.97
27 40 0.46 34 5.7 2.7 1 23 1086 1109 1086 1109 0.94
28 40 0.059 4.3 8.6 1.9 1 23 1115 1138 1115 1138 0.96
29 40 0.00018 0.013 16.5 0.8 1 23 1144 1166 1144 1166 0.98
30 40 2.3e-06 0.00017 22.4 1.0 1 23 1172 1194 1172 1194 0.99
31 40 0.00024 0.018 16.1 5.1 1 23 1200 1222 1200 1223 0.96
32 40 0.022 1.6 9.9 0.1 2 23 1342 1364 1341 1364 0.95
33 40 0.31 23 6.3 6.7 1 23 1386 1408 1386 1408 0.95
34 40 0.00057 0.042 14.9 0.3 1 23 1412 1434 1412 1434 0.98
35 40 0.18 14 7.0 0.0 1 23 1439 1462 1439 1462 0.96
36 40 0.00019 0.014 16.4 2.2 1 23 1468 1491 1468 1491 0.98
37 40 0.32 24 6.3 1.3 1 23 1498 1521 1498 1521 0.93
38 40 0.0011 0.077 14.1 1.5 1 23 1527 1549 1527 1549 0.95
39 40 2.2e-06 0.00016 22.5 1.0 1 23 1555 1577 1555 1577 0.99
40 40 1.6e-06 0.00011 23.0 2.7 1 23 1583 1605 1583 1606 0.95

Sequence Information

Coding Sequence
ATGGAAAGACAGTGCAGCAATTCAAGCAATGACATAATACTAAAGGAAACAGAAATGAATAACGTAACGGAATCAGATAAAAGACCGAAAACAAAATATCAGAGGAGTGCTAGAGCCGAGTCACGCttcttaataaaaaagaatGCAGCTGCCATATTAAACTGCTGGACAGTTTGTCCCTTCAGATGGAAAAAGAATAGATTCAAATGCGCATACTGTGAAGCAGACTTCACCGAATGCAATTATCTTCGTAACCACGTCGAACTGTGCTCGAAGCAACACACAGTCAGTGATATCTATAGCAAATTCAAGGAAATGCCAATGATAAACGTTGATATAACAGGCGCCGTATGCTCTTTCTGCAACACACCTTTCAAAGACATTGGACAAATGCGTGAACACGTCATTCAACATGGTCTTGAATTTGATACGAAACATTCAGAAGGTGTACTTCCTTTCTCTTTAGACAAGGAATTTTGGATGTGCGTAATTTGTGGAGAAACGTTCAATAACTTCCTCAAACTATATGAGCATATGAATGTACATTATCAGTATTACATTTGTGTCACTTGCGGCAAAGGTTATATGACGGCCCCTCGTCTCAGGAAACACTCAGAAGTGCATATATCTGGTTCGTTCCCTTGCGATAAATGTGGAAAAGTATTCGTTTTACGTTCAGCTAGGGATTCTCATAAAGCTGTAGCACACGCCAAAGGTCCTCGGTACGAGTGCCCCCAATGCGATACGCGGTTCGAAAGCTATTATGAACGGATGGCGCATCTGAAAGAGGTTCATAAAGTCAAGGAGGTGTCATACCGATGTGCACATTGCGAATTGTCGTTTAAGACAAGTGGTAAACGCGCTATTCATGTCCGGTCGATACATTTTCCTCGTCAACGTGAATTCAGCTGCAAGGAATGCGAATGGCAATTTAAAACCAACTACGAGTTGAAGAGGCACATGGTCAGACATACCGGAGAAAGAAGTTTCCATTGCTCGTTGTGTGGAAAGTCGTTTCCAAGGAATTTTGCACTGAGAACACATCTGAAAACCCACCAGGAGCTCAACTgTACCGCTTATGATGCGGAACGAAATGTAGGTGTGGTTAAACGAGTTACAAAGTTAAAGGAAGTTGTAAGTGCTCGTCAGATGCGAAGGCGTCGACGGGCAAACAATGAACTGCCCGAGGAATCCGAAAAACGCATTTCTAAAACTATGATGCGACGAAACGCTATGGTCCTTCTAGAAAATTCGACTGCGTGGGCTTTCAGATGGTACCACAGCTCCTTTTTCTGTTCCTATTGCGACGCAAAATTTGTTGACGTTGATCCTTTTCGCAATCATGTAAGAGATAAGCACCTTAACGAAATGCCTacgaataaaatatttgcgaaactgACCGAAAATAATATGGTCAAAATCGATATAGCCGATCTCAGTTGTAGGCTATgtaatagtatttttaatggCTTAGAACCTTTGAAGGATCATTTAAGATCGCATGGAAAAGAGTTAAATAAAGATTTCAGTGACGGCGTGTTACCTTTTAGGCTCAATGAGGATGGATTTTACTGCCAAATATGCTTCTCACACTTTTTAAACTTCTCAAAGATAAATGAACACATGAACACACATTATCAAAACTACGTTTGTGATGAATGCGGAAAAGCGTTCATTTCTAAATCCCGTTTCAGAAAACATGTGCAGTCCCATGAAAAGGGTAACTTTCCATGTGGCGATTGTGGTGAAATCCTGGACACTAGGGCTGCGAGAATGTGCCATAGGATGAGAGTACATAGGAAAGGTGTGCGATACGCATGTCCGCGATGTCCGGAAGTGTTTACAGCTTACCATACAAGAGTGAAACATCTAGTTAATGTTCACGCTCAGCAAAAGAAGGAGTACGACTGCAATGCGTGTGGAAAATCTTTTGAAACTAGTTCTAAGCGTGCTTGTCATTTTCGAACAGACGTTGGAAAACAAGGATCTTCTACTGATGCAGTGACTGTTGTGTGGAAGAGGAAATCGAAGCTCTATGAGGATAAAGCCAATGCTGCTTTTTTACTCGAGAATTCAAATGCTGTTGTATTTAGATGGAATAGAGGGAAGTTTATGTGTGCGTATTGCCCCTTAATTTGCGCTAACGTTGCCGAATTACGACTGCATTCAGCAGCTCATGATAAATTAGACGTCCTTGAGAGGCCAGGGGTTAGTAACTCATTCCCTCTAAGGATAGATATCACTGACTTAGCTTGCGGTATATGCTACGATGCGTTGAATAATCTAAACGATTTAAAAAGGCACTTAATTGAGGTGCACTCTAAGAAAACGGATCCAAACTACACAGACGGTGTAATACCATTCGTGTTGACAGGAAAGGAGTATAAATGTGTTCATTGTGGAAAACTTTTTGAAAGTATCATGACGTTGTTCGTTCATATGAATACGCATTTTCAGAGTTATGTATGTCATACATGTGGAAAAGGTTATTCGGGACAGTACAAATTGCGTGCTCATCAATTAAGCCACGGAATTGGACAATTTAAGTGTTTAAAGTGTGATTTAGTGTTTCCTAGTTATAATGAGAGAAAAAAGCATGCCGATGGAGCTCATGgaTCCAtcgaaatcaaaattaaatggaGTCCGAAGCGCAAGTATAACGATAACAGAGATAATGCTGCTATAATTTTTGAATGTTCTAACGTCTGTCCATTTAGATGGAAGCGTGGTACTTTCACTTGCGCTTTCTGCCCTATTACCTTCGGTGATTTTAGTGGAGTAAGAGAACACGTGTTAAACCATTCAAATAGAATAGAAGCTTTGCGTATCGCACGTCCCACTACCAATATCAAAGTAGATGTAACAGATCTCAGATGTGAGCTCTGTCTCGAAACGATGAAGGACATCGAGAGCCTCGCTGATCATCTTATAACTACTCACAATAGACGTATTAATAAGAAATACGATTTCGGAGTAACGCCGTTTTTGCTCGGCGGCAATCAGTACAATTGCACACAATGTGACGAATCTTTCGAGCTATTTTCTAAATTGAATTCACATTTGAATCAACACTATCCAAATCATATTTGTTTCTTATGCGGTAAAGCATTTTCTATGATCGGCAGACTCACAGCGCATCTCACTATACACGATCGCGAAAATCAACAGCATAAATGCACGAGATGCAATAGTGTTTTCGCGACTATAGCTATGAGGAATAATCATATCAGATCTGCACACAAACAACGTGCAAGGCACAGGTGTCCATATTGCCAAGATACATTTAAGAGTTACGCCGACAGAGGCAAGCATTTGAAGCTATATCACGGCAAAAAGGTGGAATATCCCTGTCATTTGTGTCCAGCTGTATTTGCCATGTGCAACCAGAGAACTAAGCATATAAAGCAGGTCCATATTAGACAGAAAACGTTCTCCTGTGCTATTTGTAGTTGCATGTTTGTGACTGCCGCTCAGTTAAGGAGTCATATGATCAAACATGGAGGCGAGCGAAAGTATCAATGTCAGGTGTGTAAGAAAGCATACGCTAGATCCAAAACGTTGAGGGAACATATGAGGATACATAATAATGACAAGAGGTTCGTTTGTGAGTACTGTAATAATGCTTATGTGCAGAAATGTAGTCTAAAAAGCCATATGCGTACGCACCATTCCAACGCTGAACCGTTAAAGAAGATAGAGGTCTTAGgaAGAAAATCTGAAGCAATAAAGATAAATCCCGATGTGGTAACAGAGATAGAAAATAATACAACGGCACTTACCACAGCGCGGGACATGGGGAACGAGAGGCGGGCAACTTTCAGAAATAACATTGCAATTATCATTGAATCTTGCACAGCCTACCCATTCAAATACAGAAAGGGCACATACCTTTGTTTTTTCTGTAAAAGCACCTTCCTGGAACCAGAGAAACTGAGAGAGCACAATTTGCTTCACCATTCCGACGTGAAACATTTGCTGAAACCAAGAAAGTACGAGCCTCTGAAAATGGACTTCGCAACAACGACATGCAAACTTTGTGGCATCAGCATAACAGATTATGCTATGCTGAAGGTACATCTAACAATTGAGCATCAAAAAATTATTGATGTATCTCACGGAGAAAGCGTTCTACCGTACAAGCTATGCAAAGACGAACACTGCTGCCAGATCTGTGGCAAACGGTACGAGATGTTCTTGAGTCTTCACAAACACATGAACGATCATTACGAGCACTTCATCTGCGAAACATGCGGTAAAGGGTTCGCTACATCACAGAGAATGGTGAACCACGCTCGGACACACGAGCGAGGAGACTTCCCATGCAAATGGTGTGCAGACACCTTCCCATCTTACGCATCATTGTACGCTCACATAGCCAAAATACACAGGTCAAATAAGAGATACAAATGTCCGATTTGTGATGAGAAATTCGTCTCCTACAAACACAGACTTAAGCACTTAAACACGGTGCATGGGGAGAAAACTGCCGTGTTTCCCTGCCCGTCGTGTCCAAGAGTCTTCGATTTGTGCAGTCGACGTACAGCTCACATAAAATTCCAGCACTTACAAGAAAGAAATCACATCTGCTCTATCTGTGGCATGAAGTTCTTCACGAATTATGAGCTTCAAGAGCATTCTATCAAGCACGGAGGCGAGAGAATTTATCAATGTGATGTTTGCAAAAAATCTTATGCTAGATTAAAGACTTTACGAGAACATATGAGGATCCATAATAATGATAGAAGGTTTATTTGCCCTGTGTGTGGACAATCGTTTATTCAGAATTGCAGTTTGAAGCAGCATATGCGGGTACATCACCCGACGCATTTGAAAGATGTATTTtag
Protein Sequence
MERQCSNSSNDIILKETEMNNVTESDKRPKTKYQRSARAESRFLIKKNAAAILNCWTVCPFRWKKNRFKCAYCEADFTECNYLRNHVELCSKQHTVSDIYSKFKEMPMINVDITGAVCSFCNTPFKDIGQMREHVIQHGLEFDTKHSEGVLPFSLDKEFWMCVICGETFNNFLKLYEHMNVHYQYYICVTCGKGYMTAPRLRKHSEVHISGSFPCDKCGKVFVLRSARDSHKAVAHAKGPRYECPQCDTRFESYYERMAHLKEVHKVKEVSYRCAHCELSFKTSGKRAIHVRSIHFPRQREFSCKECEWQFKTNYELKRHMVRHTGERSFHCSLCGKSFPRNFALRTHLKTHQELNCTAYDAERNVGVVKRVTKLKEVVSARQMRRRRRANNELPEESEKRISKTMMRRNAMVLLENSTAWAFRWYHSSFFCSYCDAKFVDVDPFRNHVRDKHLNEMPTNKIFAKLTENNMVKIDIADLSCRLCNSIFNGLEPLKDHLRSHGKELNKDFSDGVLPFRLNEDGFYCQICFSHFLNFSKINEHMNTHYQNYVCDECGKAFISKSRFRKHVQSHEKGNFPCGDCGEILDTRAARMCHRMRVHRKGVRYACPRCPEVFTAYHTRVKHLVNVHAQQKKEYDCNACGKSFETSSKRACHFRTDVGKQGSSTDAVTVVWKRKSKLYEDKANAAFLLENSNAVVFRWNRGKFMCAYCPLICANVAELRLHSAAHDKLDVLERPGVSNSFPLRIDITDLACGICYDALNNLNDLKRHLIEVHSKKTDPNYTDGVIPFVLTGKEYKCVHCGKLFESIMTLFVHMNTHFQSYVCHTCGKGYSGQYKLRAHQLSHGIGQFKCLKCDLVFPSYNERKKHADGAHGSIEIKIKWSPKRKYNDNRDNAAIIFECSNVCPFRWKRGTFTCAFCPITFGDFSGVREHVLNHSNRIEALRIARPTTNIKVDVTDLRCELCLETMKDIESLADHLITTHNRRINKKYDFGVTPFLLGGNQYNCTQCDESFELFSKLNSHLNQHYPNHICFLCGKAFSMIGRLTAHLTIHDRENQQHKCTRCNSVFATIAMRNNHIRSAHKQRARHRCPYCQDTFKSYADRGKHLKLYHGKKVEYPCHLCPAVFAMCNQRTKHIKQVHIRQKTFSCAICSCMFVTAAQLRSHMIKHGGERKYQCQVCKKAYARSKTLREHMRIHNNDKRFVCEYCNNAYVQKCSLKSHMRTHHSNAEPLKKIEVLGRKSEAIKINPDVVTEIENNTTALTTARDMGNERRATFRNNIAIIIESCTAYPFKYRKGTYLCFFCKSTFLEPEKLREHNLLHHSDVKHLLKPRKYEPLKMDFATTTCKLCGISITDYAMLKVHLTIEHQKIIDVSHGESVLPYKLCKDEHCCQICGKRYEMFLSLHKHMNDHYEHFICETCGKGFATSQRMVNHARTHERGDFPCKWCADTFPSYASLYAHIAKIHRSNKRYKCPICDEKFVSYKHRLKHLNTVHGEKTAVFPCPSCPRVFDLCSRRTAHIKFQHLQERNHICSICGMKFFTNYELQEHSIKHGGERIYQCDVCKKSYARLKTLREHMRIHNNDRRFICPVCGQSFIQNCSLKQHMRVHHPTHLKDVF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-