Odup012649.1
Basic Information
- Insect
- Ochropacha duplaris
- Gene Symbol
- -
- Assembly
- GCA_951361185.1
- Location
- OX592702.1:12166380-12175039[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.5e-10 2e-07 31.2 0.0 4 39 1440 1476 1437 1480 0.89 2 4 4.1e-10 1.8e-07 31.4 0.3 2 39 1492 1529 1491 1532 0.92 3 4 2.8e-15 1.2e-12 47.9 0.1 2 45 1547 1591 1546 1591 0.96 4 4 1.2e-17 5.2e-15 55.5 0.1 1 44 1598 1642 1598 1643 0.96
Sequence Information
- Coding Sequence
- atggagtctcttttatttttacaagatGATGTTAATTCACGTATAAATAAAGCactaactaattttaaaaaatcaccaAAAGATCGCATAACTAGAGAATATGTAGAAAGTAAACTAGAGTCCCTTGAAAAACTATGGTCGCAATTCATGGAAACTCACAAGGAATTGTTAAAATCATGCGATCCTAAAATTTTTAAATCTTCTACTTATATGTTGAATGACGAATATGGTGAAACAGAAGAGGTGTATGAAGATTATAAATGTAAACTAAAATCTTTAATAACTCAATTTAATAATAGTCAACTAAAAGTACATAGTATTGATCCAAGTCCGTCAACATCTGGTTCGAATTTAAAATTACCAAAAATAGAAATTCCAAAATTCTCTGGAAATTACCTGGAATGGACAACATTCCGTGATTTATTTACATCTTTGGTTCACAATACAGCTATTGATAATTCACAAAAAATGCAGTATCTGAAAGGTTTGTTAACTGGTGAAGCAGAACAGCTGGTGAGACAAATTAACATATCTGCAGATAATTATGAGAGGTGTTGGGCTACACTAGAATCgcgatataataataaaaaatacctatcacaCTGTATACTAAAAAGAATGCTTAGTCAACGCAGTGCAATGACTGAATCGGCCAGTTGTCTGAGGGACTTGATGGATACGACAAGTGACTGTCTAGGGGCGTTAAAAAACCTTGGGATCGATGTGTCGTCATGGGATATTATTGTGATACATATCATTACACTTAAGTTAGACCCAGAATCTAGAAAACAATGGGAGTTGCAAGTGACTAGCAATACTACTTCAGATTCCTTACCAACTTTCGATCAATTCAAAGAATTTCTTACTGGTCGTTATAGAGCACTTGAATTTCTGGATTCTAgatctaatataaataaaattcataaatctCAAGCATTTCATGTCTCCAATATTGTATGTAAGTTCTGTAACGAAAGTCACAAGCTAGTTCACTGTAGAAAATTTATTAGAGCAGACGTGATTGAACGTCGCAGCTTTGTGGAACAAAATGGTCTATGCTTTAATTGTCTGGGTGTTAACCATTCGGTCAAGCAGTGTTTGAGTCAAACTTTATGTCGAATCTGTAAACGAAAGCATAATTCCTTGCTTCATACAACTGATACTAACGCTGTTCATTTGGCAAATAATGTACCCGGGTTGGGCAGCAGAGATTCATCTAGAGAAAGAAACTCAGAATCGTCTGACGCAAATAACATTGAAGCAGTAGCATCGCATTTTTcgtcaaataaaattacaaatcatAATCAAGTACTATTAGCCACAGCTATGGTACTAGCTGAAGCTAAAAATGGATCAAAACATACGATCAGGGCATTGCTAGATCAAGGATCCCAAGCATCATTTATCACAGAGGCAGCTGCCCAGTATTTGGGTTTAAAGAAGATTCCAGTAAAGGGGATTATATCAGGTAAGAAAATTACAACAGTGGATTGGATATTAGAATTACCGTTGGCAGATCCACAATATCATACACCAAATAGAATAGATATTTTACTTGGAGCTGAAGTTTATGGCCAAGTTATTCAAGAAGGACCTACTTTACAACCGGAACTAAGGCATATTTTAATGAGATGGAGATTGCATCCAATTTCTTTGTCTGCTGACATAGTTAAGATGTATCGCCAAATTAAGGTAGCTGAAGAAGATGCCGATTTTCAGAGAATTGTTTGGAAAGAGAATCACAATGAAGAAACTATTGATTATCGTTTGTTAAGAGTTACATTCGGTACAGCATCGGCTCCATATTTAGCGGTAAAAGTATTACAGcaagtggccgaagatgaaaaAGAGAAATACCCTAATGCTGCTGCAAAGgttaaagaagatttttatatggATGATCTCTTAACAGGTGTTCAATCCGTAGATGAAGGAATACAAGTATACAAGGAAATTAATGGACTACTAAAAGAAGGAGGATTTACGTTACAAAAGTGGTCAACTAGCAATGAGGAATTATTACAGAAAATTAAAGACAGTGAGGAAAACATAGATAAAGAAGAAGCACATAAGGAACAGATTAACAAGGAAGAAGgactaaaactaaaaattgATGAAACTATGAAACTACTGGGACTTACCTGGAACCGAATGATCGACGCTTTTCGCTACACGGTGATACTGCCGCCGACCAAAGAACCTGTAACTAAAAGAATGATCATATCTGATATATCACGTTTGTTTGATCCTATTGGCTGGGTTTCACCAATTGTCGTAGTAGCAAAAGTTATAATTCAAAAGCTTTGGATATCAGGCATTGAATGGGATGATGAAGTACCAACTAAAATACTAGAAGAATGGCTTACTTACCGTCAAGATTTAGCAAAATTATCGGAGCTAAATATACCTCGCTGGATTTGCACTAAACAAAATGATGAACTCATTGAACTCCATGGGTTTTCTGACGCTTCTAAGACATTCGTAGCCAACAGAGTCTCAGAAATACTAACAACACTAGATGCACAACAGTGGTCTCATGTAAATTCAAAAGCAAATCCTGCGGACTGTGCTTCACGGGGCATCAAGTCATCTGAGCTAGTACAAGAGTTATCTTGGTTCAATGGACCAGATTTTTTACACGATACTAAAATTCAGTACAGCAAACCAAAAGATATTGAAACAAGCTTAGAAGAGGTACAAGTTCATTTTAATAAGATAGAAGATAATTTTTGGGAAAGagCAGGAGGAAGATTAGAAAAGTCAGAATTGAGTGAATGCAGGAAATATCCCATAGTGCTTCCAAAAAAGTCGGCGCTGACACAATTAATTATAGCAGACGCACATTTTAAAACGCTTCATGGTGGTATACAACTAATGCTAAATTACTTGAGATCAAAATATTGGATTCTTGGTTCAAAGGAAGCAGTAAAATCTCACATTCGTAAGTGCGTTACATGCACGAGATATTCAGCAACTAATTCTAACCAGCTAATGGGACAGTTGCCAGCAGCAAGAGTCAATCAAAATAGACCTTTTAAATGTACTGGGGTGGATTATGCGGGACCTATTAATATACGTTCTTCTAAAGGACGTGGACATCATGCCTATAAAGGTTatataagtttgtttgtttgtatggcCACCAAGGCGGTACATATCGAAGTCGTAAGTGATTTGACTACACAGGGATTCTTGGCTGCTTATAGGAGATTTGTATCACGAAGAGGATATTGTTCAGATATATGGTCAGATAATGGGACAAATTTTGTAGGGGCTGctaaagaattaaataaattgattttggcTGAAAATTCAAACTTCTCGGAAGAGCTGGCTCAAAGTTTAGCATCTGCAGGAACCAAGTGGCACTTTATTCCCCCTCATTCTCCGAATTTCGGGGGACTTTGGGAAGCCGGCGTTAAGTCGGTGAAGTTTCATCTAAGACGAGTAATTGGGGAATGCACATTAACGTATGAGGAGTTGTCTACAGTGCTGACTCAGATTGAAGCCTGTCTTAATTCTAGACCTCTATCACGGATAGATAACAATTTTGATGGAGTTGAGGCCTTGACACCGGGTCATTTTCTTGTAGGTGAACCTTTGCTTGCCGTCCCGGAGTATAATTATGAGTCATCCAACATTAATAGTATGCGCAGGTGGCAGCATACACAGCGAATGATGCAAAATTTTTGGCGACGCTGGTCCCAAGAATATTTAACGATGTTTTTACATAGATATAAGTGGTCGCAACAAACACCAGAACCTCAAATTGGAGATTTAGTATTGGTGAAAGAGGATGACATGCCTCCTTCTAAATGGCTGCTTGGTCGTGTGGTCAAAACAAAACATCCAGGTGCCGATGGCATAACACGAGTTGTAACATTACGCACTAAGAACTCTGTTATAAAAAGACCTACATCAAAACTTTGTCTCCTACCAGTAATGGGATCAGGGTTGGAGGAGCTGGCACCGCTGGCGCCGGCGGGCCCGGCCGCTACCCCGGTCTGTGTGAAACAGGAACCAGCGGACACTCCTGCGTTGACTCTCGAGACCTTGCAGTCTGCTCCACATAGTGCTGCGGGTTCCATTTTGCTCGATAGACATATGTCGATGTCGGCGTTTGATCTGAAAAACGAAGTGCCTGACTCCTCGGAGTTTACTCCATTATTGGCCGTCAAGGATGAACCTGTATCGGAAGGAGAAGTATCAACATCAGAGCCACAACAACTAAGTGGCGACGATACGAGTGACTCTGGTGGCGCCCACCACGACGCACACAGCAGCGCCCGCGGCACCCCCAAGACCTGGACCCAACAGGATATGGACAACGCGCTTGAAGCACTGAGAAAACATAATATGAGTCTTACTAAGGCATCAGCTACATATGGTATTCCTTCAACAACGCTCTGGCAGCGCGCACACCGATTAGGAATCGATACACCAAAGAAAGAAGGTGCTTCGAAATCTTGGAGCGAAGCGGATTTGCGTGGAGCCTTGCACGCTCTGAGGGCCGGCGCTATATCTGCCAATAAGGCGAGCAAAGCTTATGGGATACCGAGCAGCACTTTATACAAGATAGCACGTCGCGAGGGCATTCGGTTAGCAGCGCCGTTCAACGCGGCTCCCACTGCCTGGCGCCGCGCCGACCTGCAGCGCGCACTCGCCTCCATCCGCTGCGGAGCCACCTCCGTGCAGCGAGCCGCCTCTCAGTACGGGATACCCACGGGCACACTATATGGGAGGTGTAAGCGAGAAGGCATAGAGCTATCTCGTTCCAACCCTACACCGTGGTCGGAAGATGCTATGGGGGAAGCCCTTGAAGCAGTTAGGGTCGGTCAAATGTCAATAAATCAAGCAGCGATACACTACAACTTGCCATACTCATCTCTTTACGGACGATTCAAGAGATGCAAGTACCAAGCACAGAGTCTCCCACCAATTCAACAAGAAATACAGAAGAGCAACGAAATGGAACATCAAAATCAAGACATGTACTACCAACAGCAGATGCCCACCCATCAAGTTCATCACCTGGAAGATCAATCACACGTTCAGTATGTACAACACGTTCATGAATATATGCAGGATTCGTCACATAACATGTTACAAGACCAGTATGGACAAGCAATGTATtacaatcataattttaatagtatTGCCACCAGCTGA
- Protein Sequence
- MESLLFLQDDVNSRINKALTNFKKSPKDRITREYVESKLESLEKLWSQFMETHKELLKSCDPKIFKSSTYMLNDEYGETEEVYEDYKCKLKSLITQFNNSQLKVHSIDPSPSTSGSNLKLPKIEIPKFSGNYLEWTTFRDLFTSLVHNTAIDNSQKMQYLKGLLTGEAEQLVRQINISADNYERCWATLESRYNNKKYLSHCILKRMLSQRSAMTESASCLRDLMDTTSDCLGALKNLGIDVSSWDIIVIHIITLKLDPESRKQWELQVTSNTTSDSLPTFDQFKEFLTGRYRALEFLDSRSNINKIHKSQAFHVSNIVCKFCNESHKLVHCRKFIRADVIERRSFVEQNGLCFNCLGVNHSVKQCLSQTLCRICKRKHNSLLHTTDTNAVHLANNVPGLGSRDSSRERNSESSDANNIEAVASHFSSNKITNHNQVLLATAMVLAEAKNGSKHTIRALLDQGSQASFITEAAAQYLGLKKIPVKGIISGKKITTVDWILELPLADPQYHTPNRIDILLGAEVYGQVIQEGPTLQPELRHILMRWRLHPISLSADIVKMYRQIKVAEEDADFQRIVWKENHNEETIDYRLLRVTFGTASAPYLAVKVLQQVAEDEKEKYPNAAAKVKEDFYMDDLLTGVQSVDEGIQVYKEINGLLKEGGFTLQKWSTSNEELLQKIKDSEENIDKEEAHKEQINKEEGLKLKIDETMKLLGLTWNRMIDAFRYTVILPPTKEPVTKRMIISDISRLFDPIGWVSPIVVVAKVIIQKLWISGIEWDDEVPTKILEEWLTYRQDLAKLSELNIPRWICTKQNDELIELHGFSDASKTFVANRVSEILTTLDAQQWSHVNSKANPADCASRGIKSSELVQELSWFNGPDFLHDTKIQYSKPKDIETSLEEVQVHFNKIEDNFWERAGGRLEKSELSECRKYPIVLPKKSALTQLIIADAHFKTLHGGIQLMLNYLRSKYWILGSKEAVKSHIRKCVTCTRYSATNSNQLMGQLPAARVNQNRPFKCTGVDYAGPINIRSSKGRGHHAYKGYISLFVCMATKAVHIEVVSDLTTQGFLAAYRRFVSRRGYCSDIWSDNGTNFVGAAKELNKLILAENSNFSEELAQSLASAGTKWHFIPPHSPNFGGLWEAGVKSVKFHLRRVIGECTLTYEELSTVLTQIEACLNSRPLSRIDNNFDGVEALTPGHFLVGEPLLAVPEYNYESSNINSMRRWQHTQRMMQNFWRRWSQEYLTMFLHRYKWSQQTPEPQIGDLVLVKEDDMPPSKWLLGRVVKTKHPGADGITRVVTLRTKNSVIKRPTSKLCLLPVMGSGLEELAPLAPAGPAATPVCVKQEPADTPALTLETLQSAPHSAAGSILLDRHMSMSAFDLKNEVPDSSEFTPLLAVKDEPVSEGEVSTSEPQQLSGDDTSDSGGAHHDAHSSARGTPKTWTQQDMDNALEALRKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLQRALASIRCGATSVQRAASQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQAQSLPPIQQEIQKSNEMEHQNQDMYYQQQMPTHQVHHLEDQSHVQYVQHVHEYMQDSSHNMLQDQYGQAMYYNHNFNSIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -