Odup010339.3
Basic Information
- Insect
- Ochropacha duplaris
- Gene Symbol
- kn
- Assembly
- GCA_951361185.1
- Location
- OX592700.1:2169512-2180854[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.6e-119 5.2e-115 385.6 0.0 209 387 13 209 6 213 0.98 2 2 2.6e-09 1.8e-05 23.9 6.3 421 563 220 371 210 389 0.67
Sequence Information
- Coding Sequence
- ATGTACTTGCCGCAGAGTATAAATGTAGTTGTTTCACAGGTGGTAATATCGACGCAAGTGATGGTGGACGGGCCTCTACTAGCGATATCGGACAACATGTTCGTGCACAACAACAGCAAACACGGTCGTAGAGCGAAGAGGCTCGACCCAACTGAAGGTATTGACGCCGCGCCAGACACTAATTCGGGTCTATATCCACCGTTGCCTGTAGCAACACCGTGCATTAAGGCGATATCTCCGAGCGAAGGCTGGACTTCGGGCGGATCAACGGTGATCATTGTAGGGGACAACTTTTTCGATGGATTGCAAGTTGTATTCGGGACTATGTTGGTCTGGAGCGAGCTAATAACGTCGCACGCGATAAGAGTCCAGACACCTCCAAGACACATACCAGGCGTCGTAGAAGTAACCTTATCGTATAAAAGCAAACAGTTCTGCAAAGGTGCACCGGGAAGATTCGTTTATGTTTCAGCGCTCAACGAGCCTACGATAGATTACGGCTTCCAGAGACTTCAGAAACTTATACCGAGACATCCTGGTGATCCGGAGAAATTGCCTAAGGAAATAATTCTAAAACGAGCAGCAGACCTCGCGGAAGCCTTATACTCAATGCCCAGGAATAACCAGCTGGGTCTTGGAGGGCCCAGGTCTCCCCCTGGTGCTAGCATGCCCTTCAACTCGTATTCTGGGCAATTAGCCGTCAGCGTTCAGGACACCGCGGCTTCGCAGTGGACTGAAGAGGAGTATGCGCGCAGTGGCGGATCGGTGTCGCCGCGGTACTGTTCCGCCGCGTCCACCCCGCACGCCGCGCCCGGCGCTTACCCTCACCCTCAACACTACCCCGCGCCGCCTACCTCGCTCTTCAACACTACCTCACTGTCGCTAGGACCGTATCATCCTGCAAACATGAATGGGCACATAACTGAACACTGTAACGCGTATAACATGAAAGATAgcggacattacagtgaaagaaATGGGAATTCAAAAAGCGCGGGTGACTGTCCAGCAAACACTCATACAAAATTCAACTACGATGTGAAAGAGTCGCTGAATAAAGAGACCAAGTTGAGAAGCGCTTTTGCTGTTGTAAAGCACAGTCCGCCCCGCTCTCATGCTCACCATCAAAATTGGCAGCACCTCGCCGTTCAATcTGTATTTTTCACGTCTTGTAATTTGTCTACAGGAATGGGTGGTCTAGTTTCATCACCTTTCAGCGTGAATCCGTTCTCATTGCCAACATGCAGTGCGCAACAATACGCACAGACAGCGCCGCTTGCGTCCAAGTAG
- Protein Sequence
- MYLPQSINVVVSQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAAPDTNSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGGPRSPPGASMPFNSYSGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPGAYPHPQHYPAPPTSLFNTTSLSLGPYHPANMNGHITEHCNAYNMKDSGHYSERNGNSKSAGDCPANTHTKFNYDVKESLNKETKLRSAFAVVKHSPPRSHAHHQNWQHLAVQSVFFTSCNLSTGMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00036409;
- 90% Identity
- iTF_00176893;
- 80% Identity
- -