Odup022992.1
Basic Information
- Insect
- Ochropacha duplaris
- Gene Symbol
- arid5b
- Assembly
- GCA_951361185.1
- Location
- OX592717.1:5705276-5718411[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.2e-12 9.5e-09 36.1 0.3 3 89 226 298 225 298 0.90
Sequence Information
- Coding Sequence
- atgGACGAGGTACTAGCAATCAACGACAAGGTGGTAGTTCGTGCGGAGGACCTCTTGAGCTGGGTGTGCGACGGTACCAACTGGCGTTGGGGGCTGCGCGCGGTGTGGCGCGGCGCTTGTGGCCCCCCCGTACCACCCGGCCACCCCAGCCAGCCAGGCCCCACCGCACCGCTGCACCACACCAAGCTGGACTTTAGTGACGTTGACAAGGAGAAGAGTACTATCGCAGACACGGACTGTCATGGTGTGGTGGTGTTCTCCTACCCTCGATACTGCCGGTACCGAGCGCTGTTAGCAAGACTTGAGGGCGTTCAGGGGGATTGGCTTAGGGACTCGCTAGTTGCAGCATTGGGAGGGTATGCCGCTCCAACTAAGAACACGAGGATTTTGTACTGTAAGGATACATTCGAGTACCCGGAGCTAGAAGGCCATGAGTTCGTGTGCAACCACCTCGCGCCGCGCCTCAAGGGGCGCCCCCGAGGACGGCGGCGCCGCGCCCCTCGCTCCCGGTCTAGATCTAGGTCTAGGTCGGACAGGTCCAGCGATAGTGAGGTGCCGGCTGCACCGCCGAGACCCAGGACTGACCCTATGACACCTCGCCGGCTATCCCTCCGCAACGGGGCCCCTCCTCGCGAGGCTCCGGACGTGACGTCATCGGCCCCCTCCGGCCTCGACAAGGCCTTCCTACTGCATCTCAAACACTTCTACACGCAGCGGAACTTGCATCTCAACATTCAACACACACTTAAACACATGTCCCTGCGTGGTCTGTACATGAGTGTGTGGTCTCGCGGCGGGTACGAGGCGGTGTGTCGACACAAGCTGTGGGCCGCGCTCAGCGACCAGCCAGCGCGCACCAGGAGACACTAcgaaagATACCTGTTACCTTATGAGAATCACGAGCGGCGCAACGGCACATTCAAAATCAACGGCAAACTAGAGGAACCCCACACCATAGCCACCATAGACGTTACAGACTCCCCGTTACGAGACATAGAGCTGAAACCAGAGATAAAAGAGAAAATACTAAGGACACCGTCACCGAAACAAGAAAAATTCATAGACAGTGAAACGGGAGAAGTTAAAGAAGAATTGAACGTTATATCTAAACCGGCAGAGGAATTAAATAGGGAGTTTCTTGAATCGTTGCCAAAGGAAGAAGAGAAGTTAAAAATTTCAGTGAAACCCGTTGAGCAATTGTGCGAACCGAAAATAGTGAAATTGTTTGAAGAGAACAGTGCGTTGATTAGTGAGTTAGTGGTTAAACACAATTTGAGTGATTCTAGTAAAGTGATAGCCGAGTTAGGGAGCAAGCAGCTGAGTCGAGATAGTTCAGTGTTTTTGAGTGAGTTGGCGCAGAAGTTAGATCTAAGCAACCCAGGCTCGACATTGGTTAAAGACTCAGCACCTCTGGACACTGCGCCTGCGACTGCCACCGTCCCAGAGAAGTCACTCAATGGCCATGAACATGTTACGTTACCTATGGGACAACAGAAGTCTCGTCCGGCTGGCAGGAGTTCCCTCCGAGCTGTGAGAGTGAAGCCGACCCGggggacacacacacatacaaacacacatacgcacacgcacacacactcacactccGCACCGCCCAGCACACCGCCAGTAACCCCGCTGCGACCGGACTCGGCCTCGTCATCACCACCGGCTACCATCAGCTCGGCCCCACCACTCAATAACTTCGGGATTCATCACCCGCCCCTAGTGAGGAGCACCAGCGCTCACAGCGATGATGAAATTGTTGAGGTACCATATCGACCAAAAACACCAGAAATAATCGATCTAGACGAGTACCCAGAAAGTCCCCAATCAGTCAAGAAGAAAAAGCTGGACATCCTCAAAGAACGAGGCCTGGAAGTCACTGCGTTGCCCACCCCCACCTGGTCCCAAACTCAACTCAACCCCATAACCCCACTAATAAACCCCCCCATGATCTTAAACCCAGCTATGCAGCACCAGATTATGACCCAAGCTCAGTTATTCcaaatgtataatataattcCTCCAAATTATTCCAACGGTATTCAACCTCCTAAAGTCATCCAAGCGACGAGTATTTTTGGGTCTGCTGGACCCGAGAAAACTGTTTACGGGAACCCCAAAGACCCATTTATGCCGCCACCCCACGTCTTGCTCGGCACCCCAGTGAAGTCCCAAAGAAATTTACCACTTTCAACGAATACCCCCCCTCATGATATCCTGGATTTAACGTGTAGGGACTCGTCGCCCCAAAAGCCGGCTGTAGAAATAGTTAGGATTCCAACTTCCACGTCGCCATCGAAGCCTGCAGCTCAGAATTTGTCCAAAAACTATACGCTCATCGACGGCAAAGCCGTGGTCGGGTCCAATTTAGAAATAACTTTAGTGAACAAGGTCCAACAAACGCCGACAAAGAATCGACCGCCACAGAAGCGTTCTTCCAACGGTAAATTTATGTCGACGAAAACGCCTACGCCGCCGAAAGATTACCCAAAGCCATACGCCTGTCCGTCCCCATCTGGGATCCCCAAAAAGCCCCAAATAGTCGTACCCAACTACCAAATAAGTAGGGACGATATATCCCCAACGAGTTCAACTGGGTCGACTAATAGCCAAGGAAACTTGTTGCCAAGTAACATGGCCGCAAATCCTTATAAGAATAACCTGGCACAGATTATGGAGATGCAGAAAACGGCGGTGCCAATGACGTCGTTCATGGACCCCTATATGGCATTGTATAGTAGTCTGGCAGGCCAGATGGACCAAAGACAATTGGCGGTGTATAGAGATTTAATGGCGAACCAATTTAGGGGGTATTCCGGGCTTTTAAATTTGGGCGCTGTAGCAAACACACCGACAACGAAAAATTAA
- Protein Sequence
- MDEVLAINDKVVVRAEDLLSWVCDGTNWRWGLRAVWRGACGPPVPPGHPSQPGPTAPLHHTKLDFSDVDKEKSTIADTDCHGVVVFSYPRYCRYRALLARLEGVQGDWLRDSLVAALGGYAAPTKNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAPRSRSRSRSRSDRSSDSEVPAAPPRPRTDPMTPRRLSLRNGAPPREAPDVTSSAPSGLDKAFLLHLKHFYTQRNLHLNIQHTLKHMSLRGLYMSVWSRGGYEAVCRHKLWAALSDQPARTRRHYERYLLPYENHERRNGTFKINGKLEEPHTIATIDVTDSPLRDIELKPEIKEKILRTPSPKQEKFIDSETGEVKEELNVISKPAEELNREFLESLPKEEEKLKISVKPVEQLCEPKIVKLFEENSALISELVVKHNLSDSSKVIAELGSKQLSRDSSVFLSELAQKLDLSNPGSTLVKDSAPLDTAPATATVPEKSLNGHEHVTLPMGQQKSRPAGRSSLRAVRVKPTRGTHTHTNTHTHTHTHSHSAPPSTPPVTPLRPDSASSSPPATISSAPPLNNFGIHHPPLVRSTSAHSDDEIVEVPYRPKTPEIIDLDEYPESPQSVKKKKLDILKERGLEVTALPTPTWSQTQLNPITPLINPPMILNPAMQHQIMTQAQLFQMYNIIPPNYSNGIQPPKVIQATSIFGSAGPEKTVYGNPKDPFMPPPHVLLGTPVKSQRNLPLSTNTPPHDILDLTCRDSSPQKPAVEIVRIPTSTSPSKPAAQNLSKNYTLIDGKAVVGSNLEITLVNKVQQTPTKNRPPQKRSSNGKFMSTKTPTPPKDYPKPYACPSPSGIPKKPQIVVPNYQISRDDISPTSSTGSTNSQGNLLPSNMAANPYKNNLAQIMEMQKTAVPMTSFMDPYMALYSSLAGQMDQRQLAVYRDLMANQFRGYSGLLNLGAVANTPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00006869;
- 90% Identity
- -
- 80% Identity
- -