Basic Information

Gene Symbol
-
Assembly
GCA_905404295.1
Location
FR990146.1:6935958-6941240[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 1.7 2.1e+03 -0.5 0.0 23 44 362 382 357 384 0.87
2 6 3.2 4e+03 -1.5 0.1 32 42 470 480 462 482 0.82
3 6 0.018 23 5.7 0.1 20 45 600 627 583 628 0.82
4 6 0.00023 0.28 11.9 0.0 14 44 698 729 694 731 0.88
5 6 0.018 22 5.8 0.2 13 44 867 905 852 907 0.79
6 6 0.14 1.8e+02 2.9 0.4 3 14 1054 1065 1052 1075 0.86

Sequence Information

Coding Sequence
ATGGAGCAAATAGTAGTTAAAACTGAGGTACAACCAAATGGAGAAATACTATTGTTTAATTTCTATGTTGATGAAAGCAGAAATGAAGAGGATGGAAATGAGGGAGACACAGTTACATTTACTGAAGAACAAGCTACACAATTACACTATTTACACAGGGAATCTGTTGATTTACATGAAGACAAATTTATTATTGAGGAGATAGATGATTCGGAAAATGTTGATGTAAGTACTTTGGCTGTACCTAGGAATGACTTAGATCAATGGCTTGATGATGAAGTAAGGAAGCTGCTCATATTTTACATAGACAATAAAGAAGCTTTTCTCAGTGGAACCACAAAAAGAAAATATCTTTGGGATGTAGCTTGTAAGACAATGTTACATGGCAAAAATCATATTTCATGTGAACAAAAACTTAATAGCATTATGAAAAAATATGCTGAAGTCTTTGTAGAAAAAAGAAAAGGTGCTCATTTGACGTGGCCTCACTTCTCAGCATGCAATCAGGCATTTTATGATAATAATGAAGCTAAAACGATCATTGATCAAATGATGAATGAAAAAACTGCAGTTGAAATAAATGCTCCAGAAACTCGCGTCAAAGATGATGGCATATTAGTTACCCAGAAACCAAGCAACCCTCCTGTTGTTAATGAAAAAGTAGAATTAATGCTCAATTTATACTTAAAACACAGAAAGAAATTTCAAAAGAATGAATCCCAAAGGGGTCTTTGGGAGTTAATTGTACTAGAAATGGGAGAACAGGATATAGATTATTGGCACAGACGCTTTTTAAATCACAAACAGCATTATATTAGATTGTTACATAAACAAAGAGAGAGTGGAGTAGATAGTGTGACTTGGCCATACATGAAAGCTTATGATCAAATTTTCAAAAATGATGAGGACTTTCATCGAAAATTGTCACCAAAAATCACAAATAAGCATCAGAATGATGTAGAGGCACTAGTTGAAGAAGCACAAGAATTATCCTGGGGTGACATGGAAAAAACATTCTTAGTGAAATATTACTTTGATTGCTTTCATGAATTTCAAGATGTTTCTATACCTAATATGTTCCTCTGGACTGAAGTAGGTCGCTTGCTTGATAAAAAAGCAGTTGACTGTAAGGAAAAGTTTGCTGAACTTAAAGATGAACATATCAATGTATTAATGAAAGGGGAATATGATTTGTCAAAACGTGTACCTATGGATATTGTTTTAGATAATATAATAGCCAAAGAAGTTGAAATTCAGCTCCAAAATAGTGTCAATATTCCAGATCGTTTCATCCCATGGACAACTGAGCATGTTGATGAGTTGGTGCAATTTTTATATGACAATACAGAAATGCTTAAGGATCCTGTGTGTTTTTATATTTGTTGGTATATTTTAGGAAAAAAATGTAACCTAAGTCCATTGGCGTGTAAAAATCAGTGGGAGGGGCTTGTGAAGTTATACAAGTCTATATTAAATGACAAAAAAGAGAATTCAGATATGTTAATTGATTGGAGATACATGGATCTGTTTGATAGAATATTTGATTATGGTATGGCTACAGATTTGCTAGATAGTCCAGAAAAATGTCAGAATCAAATGCAGTCCAGTAAAGTAGCCGTAAAGAAGTTAACAATAAATGAGGCAGATGACATTAATATGGAGAACGGTATAGAAGAAGAAGAAATATATGATGAGAGAGGATTTATGAAACATTCTAAAAAGCAAGCGGGTGATACTAAAGCTTTCAAAATCTTAGAGTTTTATTTAAAACATAAGCATAGATTCTCCTCATCTGTAGGCAAGAGAGTGGCGCTTTGGGAGACGTTATCCAAACAAATTGGAATTTCTGCTACCGAATGCGCTCATAGATTTCGAAACTTCAAACAAGTTTATAAAGCGTACGTCAAGAGGGAGATAAGTAAGCCAGAAAAACCGATTCTTTGGCCTTATTACACTATATGTAAGAAAATATTTGGCTACCGATCAATTAAGAACAAGATTAAAAATGAGTTAAAAACTGAAACCGACGATGAAGATTGGTCTGCAAAAAATATCAAAACATTGATCGGTTTCTTTGCTCGTAACTTCAATGAATTGCATGATAAAATAGGGGAGAGTAGTAAGTGGGCATCCGTAGCAAGAGAACTCGGTCGATCAAATTCAGCTTGCAGCGAAAAATTTATGGAATTGAGAAAGTCTTACCGTAAACTGAAGACAATGAAGTCACGTAATCCTCACGTGAAGGTATCCTGGAAGTATTTCAACTTGATGGATGAGATATACAATAATGAAGGTACCAATAATCAGATGGAGATTGTGGAAGCGATGGACGTTTACAATGAGCCGGGTGAATTGAGTAGTGAAAGTAATATCAAACAAGAGTTACAAGATGAAGACTACACAATTATTGTTATACCAGAAGATGAGGATTTCAGTAATGTCCCATACATTCTACCAGATGGCGAAAATATCCTACAAGAATATACCGAGGGATTGGAATCATATGCAGAAGAAATAACGAATGTTAAAGAAGAAGTAATTGAAAAGTCTTTACCAAAATGGACTAAACGTACTAAGAAGAGACTGCTAATACTTTACTTGAACTATCTGAGAACACACAAAGGCCAAGAAATAAAACCGAAGGAAATGTGGACAGAAATAGCGTCCAAGTTTGGTGACAGAAAGCCTATTACATGCAAACGAATGTTTATAAAATTAAAAGAGAGACATAAAAAGGCAGTTGCAGAGGAGACACCTAAAGCAGAAATACCATATTTCGCGTTATTTGAAAAGATACTTTCGCTGAAGCCAAAGTATGCGAGAAATCAAAATAACGCCGGAGAGAGTCGGACATACAAAGATTATGAAATGGAAGATTCCAAAGTAGATTTGGCTCTGAAATATTACTTGCAAAATATCGACGAGTTTATAAGCCCCAGGTTCGAGAAGAAATATCTATGGACAGAATTGGCGAACTACATTTCTGAGCCAGTATCCAAAGTTTTTAATAAAGTCAACTATTTAATACAGTTTTACAAGAGCAATACTCTTGAAGCCGAGAACACACAGTTTGGAGAAGTGTTAAAAGAGATATTTATTAAGGAGAATCTGCTTAATGATGTCCCGAGTGAGAATAAAACAATCGAAGAAGTAAATGATTCTTGGACCAATGAGGAAATAGAGACTTTGTTAACGTGGTACTTGGCCCATTTGGAGAAATTCAAGAACCCAAAATTCGTTCGCAGTTACTTGTGGATGGAGGCGTCAGATATTTTGAAGAAAAGTCCTTGGGCTTGTTCGAACAAGATGTTGGATATAAGGACCCAGTACAGGACAATGGTTAAAGAGAATCCAGACGGTTTGAATGATTGGGCATTCACAACTTTGTGTCAAAGGATTTATGGCACTGGAAAAAGGCATAACCCAGGAAATGTAAATTAA
Protein Sequence
MEQIVVKTEVQPNGEILLFNFYVDESRNEEDGNEGDTVTFTEEQATQLHYLHRESVDLHEDKFIIEEIDDSENVDVSTLAVPRNDLDQWLDDEVRKLLIFYIDNKEAFLSGTTKRKYLWDVACKTMLHGKNHISCEQKLNSIMKKYAEVFVEKRKGAHLTWPHFSACNQAFYDNNEAKTIIDQMMNEKTAVEINAPETRVKDDGILVTQKPSNPPVVNEKVELMLNLYLKHRKKFQKNESQRGLWELIVLEMGEQDIDYWHRRFLNHKQHYIRLLHKQRESGVDSVTWPYMKAYDQIFKNDEDFHRKLSPKITNKHQNDVEALVEEAQELSWGDMEKTFLVKYYFDCFHEFQDVSIPNMFLWTEVGRLLDKKAVDCKEKFAELKDEHINVLMKGEYDLSKRVPMDIVLDNIIAKEVEIQLQNSVNIPDRFIPWTTEHVDELVQFLYDNTEMLKDPVCFYICWYILGKKCNLSPLACKNQWEGLVKLYKSILNDKKENSDMLIDWRYMDLFDRIFDYGMATDLLDSPEKCQNQMQSSKVAVKKLTINEADDINMENGIEEEEIYDERGFMKHSKKQAGDTKAFKILEFYLKHKHRFSSSVGKRVALWETLSKQIGISATECAHRFRNFKQVYKAYVKREISKPEKPILWPYYTICKKIFGYRSIKNKIKNELKTETDDEDWSAKNIKTLIGFFARNFNELHDKIGESSKWASVARELGRSNSACSEKFMELRKSYRKLKTMKSRNPHVKVSWKYFNLMDEIYNNEGTNNQMEIVEAMDVYNEPGELSSESNIKQELQDEDYTIIVIPEDEDFSNVPYILPDGENILQEYTEGLESYAEEITNVKEEVIEKSLPKWTKRTKKRLLILYLNYLRTHKGQEIKPKEMWTEIASKFGDRKPITCKRMFIKLKERHKKAVAEETPKAEIPYFALFEKILSLKPKYARNQNNAGESRTYKDYEMEDSKVDLALKYYLQNIDEFISPRFEKKYLWTELANYISEPVSKVFNKVNYLIQFYKSNTLEAENTQFGEVLKEIFIKENLLNDVPSENKTIEEVNDSWTNEEIETLLTWYLAHLEKFKNPKFVRSYLWMEASDILKKSPWACSNKMLDIRTQYRTMVKENPDGLNDWAFTTLCQRIYGTGKRHNPGNVN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01437938;
90% Identity
-
80% Identity
-