Osyl022891.1
Basic Information
- Insect
- Ochlodes sylvanus
- Gene Symbol
- -
- Assembly
- GCA_905404295.1
- Location
- FR990129.1:11356540-11362145[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-07 0.00048 20.3 0.1 3 39 238 274 236 280 0.89 2 2 2.9e-06 0.0027 17.9 0.0 4 34 315 345 313 354 0.88
Sequence Information
- Coding Sequence
- ATGGAATGTGATGATAAAATTTATGTTCACAATTTGAACAAAATACGTAATGAAAATGTTGACGATGATTATAGTGAACAAGTTGGTGATTATGATCTGTCAGAGGATGCACAGGACCAGAATAAAAAAGTGGTCAACGATGGAGATGGGGATAGAGCCAGGTGTTCATTTTGCTTGTGTACAGATCAGTTGAGGAGCTTATGGCGAGAGTTGTCTAACAATGGCGTGTCTGAGAACTATGGATCCATGTTGATTGAATGCTTTGCGTTATCTTGGGACAGACCAGAGAAACCAGAGGAAAGCCCAGAACAGATCTGTGAACAATGTATAGCCAGGTTGAAAGATGCCGTCGGATTTAAGTCGGCGGTGCTGGCAGCCAGAAGTGTTTTGAGTGAACGAGGTGGGCTTGCAAATAAAATAAAACAGGAGTTAATGATAGATGTGGAAATCGGAATGGAATTACAACCCGAGTACCTGAACTTGGAGAATGATCACCTCGATGATGATGATGACAGCCAATCGGGTACAGGGGAGGCTGGGTTAGAGGAAGGGGATTTGAAAAATGATGATCCCATAAAAGTAATCAAGCTTGAACAGTTACCAATAGAGTCAGGGACCTGGAGCGAAGCGACTCCAGCCAAGCGGACCCCAACTAGACGGAGGACGCGGTTGACCGAGTCCATACCAAAGAAGTACAAGCAGTACACGTCTGATGACGTCCAAAGGGCTGTCGAGGCGGTTGCCGGGAAGACCATGTCGCAGAACACCGCTTCCAAAACCTTCAAGGTGCCTGTCAGAGTCCTGGCGAGAGCGCTGAAGAGTTATATTGAAATCAAACAGGAGTACTGCAGTGACACAATAGGTCCCAAAGTCGCAAGTCCAACGCGTCGCAAGCGGCATCGTCCTCCTAAAGAGAAGAAGAAACAGCTGTATCCAGAACAGAATCTTCTGCAGGCCTTCGAGGAGGTGTGGAACAAGCGGATGACCAACACACAGGCTTCTAAGTTCTACAAAGTCCCCAGATCCACTTTATTTGATCTGGTTAATAAAAACCTAGGCAAGCCAAGGTCCCTGAAGAAGAAACTGAACGACGGTCCACAGGAAATGATGAAGCACACGACGAACATCCTCACTATCATGGAGCACTCCAACGCGACCCCCATCCGTTGCCATGGCGACGGAGGCTACATGTGTTGCTTCTGCAATCATCAGTACCACAAACCGGACGATCTGAAGAATCACACTTTATTCGGTCATGACTTTAAGACACGGAGAACGTTAACTAAGGGGAAAAGGCCATCTTCCTACTTTGTCAAGCTGGATATATCCTACTTGAAATGCACCATTTGCAACACTGATATGGTTACATTGGAAAAATTAATAGAACACCTCGTTAAGGACCATCAAAAGCTAATATACACTGATATTAAGAATCACATTCTGCCATTCAGATTTGAGAGCGAAGAACTGAAATGCACTGTGTGTTCCAATGTTTACAACAAGTTTAAGTTATTGCAAGAACATTTGAATGTGCATTACCAGAACTATGTATGTGAGGTGTGTAACACTGGGTTTGTGTCGAGAATAATCCTTCACAATCATTCAAGGGGGCACAAAACGGGTGTGTTTACATGTGAAGTTTGTCTAAAAGTGTATACAACGCTACGTAAACTTACATATCATAAGAACTTAGTGCATAAACATGCTTATTTAATGAGCAAGTGCGGCTATTGCAATCAGAAGTTCAAATCTTATTATAGTAAGTTGCTACATTTGACCGAAGTGCACAACGTTAAACCGATGACTTATACCTGTAAAGCTTGTAATAAAAACTTTAATAGTGTACCTGCGTTGAGGGTGCATAGAAAACGCGATCATTTGATGGAGAGGAAATATAAGTGTACAGAATGTGATATGGACTTTTTTGCTCGAGCTGAACTGACCGCTCACATGTTGAAACATTCAGGGGTGAGAGAATTTCAATGTGATGTGTGCCAGAAGTTGTTTAAGAGAAAGTTCACCCTGACTGAACATATGCGGATACATGAGAATAATTGCAGGTTTAAATGTGATCAGTGCGGTGCAGCGTTTGTGCAGAAGTGCAGTTGGAGGAGTCACATGAGGAACAAACATGGGATTATTAGCTAA
- Protein Sequence
- MECDDKIYVHNLNKIRNENVDDDYSEQVGDYDLSEDAQDQNKKVVNDGDGDRARCSFCLCTDQLRSLWRELSNNGVSENYGSMLIECFALSWDRPEKPEESPEQICEQCIARLKDAVGFKSAVLAARSVLSERGGLANKIKQELMIDVEIGMELQPEYLNLENDHLDDDDDSQSGTGEAGLEEGDLKNDDPIKVIKLEQLPIESGTWSEATPAKRTPTRRRTRLTESIPKKYKQYTSDDVQRAVEAVAGKTMSQNTASKTFKVPVRVLARALKSYIEIKQEYCSDTIGPKVASPTRRKRHRPPKEKKKQLYPEQNLLQAFEEVWNKRMTNTQASKFYKVPRSTLFDLVNKNLGKPRSLKKKLNDGPQEMMKHTTNILTIMEHSNATPIRCHGDGGYMCCFCNHQYHKPDDLKNHTLFGHDFKTRRTLTKGKRPSSYFVKLDISYLKCTICNTDMVTLEKLIEHLVKDHQKLIYTDIKNHILPFRFESEELKCTVCSNVYNKFKLLQEHLNVHYQNYVCEVCNTGFVSRIILHNHSRGHKTGVFTCEVCLKVYTTLRKLTYHKNLVHKHAYLMSKCGYCNQKFKSYYSKLLHLTEVHNVKPMTYTCKACNKNFNSVPALRVHRKRDHLMERKYKCTECDMDFFARAELTAHMLKHSGVREFQCDVCQKLFKRKFTLTEHMRIHENNCRFKCDQCGAAFVQKCSWRSHMRNKHGIIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01082789;
- 90% Identity
- iTF_01082789;
- 80% Identity
- iTF_01082789;