Basic Information

Gene Symbol
ct
Assembly
GCA_905404295.1
Location
FR990129.1:1223453-1228216[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.8e-32 3.3e-28 98.0 0.0 4 77 322 396 320 398 0.96
2 2 5.4e-31 4.7e-27 94.3 0.0 3 75 525 598 523 602 0.95

Sequence Information

Coding Sequence
ATGTCTGTTGGAACGAAAGATGGCACGTTGGGTCCAGGTTTTGGACGGCCGGAGGCGGAGGGCGACGACCGGCTGGCGCACATCCTCAACGAAGCGTCGCACATGATGAAGACTCCGACTGGCCAGAGCCACAACGATGACTCCAGGAGCAACGATGACTCATGTTCCCCCCGCACCCAGTGCCCCTCGCCCTTCTCTAATAAGGACTCGAGTCAAAACAGAAGACTGAAGAAATATGAAAACGATGACATTCCTCAGGAAAAAGTGGTTCGCATCTACCAGGAGGAGCTGGCCAAGATCATGACCAGGCGAGTGGAGGACATACGGCATAACCGCGAAGGTTTCCCGGGCATGTTTCCACCATTTTTCAGCGCCGGCATGCCACCACACATGGAAAGGCCTCCAGAAGACATTCGCATGGCTCTGGAGGCCTATCACAGGGAGCTCGCCAAGATCCAGCCAGGAGGAAACATTCCCAATCTGCACAACCTACCAGGAATGCCGCCCTTTCCGAACCTCCTGGCGCTCCAGCAGCAAGCCATGCAAGCTCAGAACCAACATATTAATGGCTCGGGAGCCGTCCAAGACCTCTCGTTGCCTAAAGACAAAAATGCCAAAATTAATGGAATGACTGATAGTGATAAGGATAGACCGATGGACGCTGAGGAGGCTATACGGCACGCGGGCAGTGCCTTTTCGTTGGTTAGGCCAAAGCTGGAACCTGGGCAGCAATCGACTGGCTCGTCCGCCTCCAGTCCTCTCGGCAATGCAATATTACCACCGGCGATTACTCCGAATGACGACTTCAGCAGCTCAGCTGCGGCGAGTCCCCTGCAACGAATGGCATCGATAACGAATAGTCTCATATCTCAACCTTCAAACCCTCCCCATCATCCGCCCCAGCAACGCTCCATGAAGGCGGTCCTCCCGCCGATCACGCAACAACAGTTTGATCTCTTTAACAATTTAAACACAGAAGACATAGTGAGGAGAGTGAAAGAAGCGCTAAGTCAGTATTCGATAAGCCAAAGATTGTTCGGAGAGTCCGTGCTGGGTCTGTCCCAAGGATCGGTAAGTGACTTGCTAGCGAGACCGAAGCCGTGGCACATGCTGACGCAAAAGGGAAGGGAACCTTTCATTCGCATGAAAATGTTCTTAGAAGACGATAACGCCGTTCACAAACTGGTCGCCTCACAATACAAAATCGCGCCGGAGAAGCTAATGCGAACTGGAAATTACAGCGGAGCACCTCCATGTCCGCCAAACATGAACAAGCCAATGCCACCAACGCAGAAGATGATCTCAGACGCAACCTCATTACTGAGTAAAATGCAACAGGAGCAACTACTGGGTCCAGGACACCTCGGCCACCTGGGTCAACCGACGCCATTACTGCTCACGCCCCCCGGCTTCCCCCCACACCACGCGGTAACCCTGCCGCCGCAGCACCATGACAATAACAACAAAGAACGAAAACCACCCCCGCCCCCTCAACCTCACCACCAGCCTCCCGTAATGCGAGGCTTGCATCAACACATCTCTCCCAGTGTTTACGAAATGGCTGCCCTCACGCAAGACTTGGACACACAAACGATAACAACAAAGATCAAGGAGGCACTTCTGGCCAATAACATTGGACAGAAAATATTCGGTGAAGCCGTCCTGGGACTCTCCCAGGGGTCGGTCAGCGAACTGCTGTCGAAGCCGAAGCCCTGGCACATGCTAAGCATAAAGGGCCGCGAGCCTTTCATCCGCATGCAACTGTGGCTCAGCGACGCCCACAACATCGACCGACTTCAAGCCCTCAAGAACGAGAGACGAGAAGCGAATAAGCGGCGGCGGTCGAGCGGGCCCGGGCAGGACAACTCCTCGGACACCTCGTCGAACGACACCTCGGAGTTCTACCACTCCAGTTCACCGGGACCCACGTCGGGTGCCCCGTCGGCGAAGAAACAGAGGGTGTTGTTCTCAGAGGAGCAAAAGGAGGCGCTCAGGCTAGCGTTCGCGCTCGACCCCTATCCCAACATGCCGACCATAGAGTTTCTCGCTGCCGAACTGGGACTCTCCACCAGGACAATAACGAATTGGTTTCACAATCACCGCATGAGGCTAAAGCAGCAAGCGCCACATGGGATGCCCGCGGAGCCGCCCGCGCGGGACCAGTCCTCGGCACCGTTCGACCCCGTGCAATTCAGGTTGCTGCTCAACCAGCGGCTGCTCGAGCTACAGAAGGAGCGGATGGGCTTAGCGGGCGTCCCGCTCCCATACCCGCCATATTTCGCGGCCAACTCCAACCTAGCGGCGCTGATCGGCCGCGGGCTGCTTCCGCCAGAGGCGGACGCGAAAGCGGCGGCGGCTGGACTGGACCTGTCCATGCCGCTAAAGCGGGAGCCTGACGCAGACGACTTCGAGGATGACGACGTTGAGAGCAACCTCGGCTCCGACGACTCCCTCGACGACGAGTCGAAAACCGAGCCGAAGGCGTCATCGACCCCGCAGGCGCGCTCCAGCCGGCGCAAGCCCGCCGCGCCGCAGTGGGTCAACCCCGACTGGCAAGACGAGAAGCCGCGCAACCCTGACGAGGTGATCATCAACGGCGTGTGCGTCATGAGGAGCGACGACTTCAGGAGGGAGTCCGAGGAGACGGTGCGGGTGGAGCCGTCGCCGGCGCCGCGGGAGCCCTCCCCCGCCGCCTCGCCCCCCTCGCCCGCCTCCCCCGCGCGCGCCCCCCACTCGCCCGACGTGCTTCCCGAGGACAAAATAAAGACGGAGGCGGACGACGACCGGTGGGAGTACTAG
Protein Sequence
MSVGTKDGTLGPGFGRPEAEGDDRLAHILNEASHMMKTPTGQSHNDDSRSNDDSCSPRTQCPSPFSNKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMTRRVEDIRHNREGFPGMFPPFFSAGMPPHMERPPEDIRMALEAYHRELAKIQPGGNIPNLHNLPGMPPFPNLLALQQQAMQAQNQHINGSGAVQDLSLPKDKNAKINGMTDSDKDRPMDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNDDFSSSAAASPLQRMASITNSLISQPSNPPHHPPQQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMNKPMPPTQKMISDATSLLSKMQQEQLLGPGHLGHLGQPTPLLLTPPGFPPHHAVTLPPQHHDNNNKERKPPPPPQPHHQPPVMRGLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTSGAPSAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSTRTITNWFHNHRMRLKQQAPHGMPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLLPPEADAKAAAAGLDLSMPLKREPDADDFEDDDVESNLGSDDSLDDESKTEPKASSTPQARSSRRKPAAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRRESEETVRVEPSPAPREPSPAASPPSPASPARAPHSPDVLPEDKIKTEADDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00025147;
90% Identity
iTF_00236438;
80% Identity
iTF_01082324;