Osyl001047.1
Basic Information
- Insect
- Ochlodes sylvanus
- Gene Symbol
- kn
- Assembly
- GCA_905404295.1
- Location
- FR990135.1:4775286-4790981[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.2e-55 8.1e-51 173.5 0.0 11 140 130 249 121 256 0.92
Sequence Information
- Coding Sequence
- ATGCTGACTAGTGGCGCCATCGGCATCAGTCGCGTCGTCCTGCTCTTGAGGCGAGGGCGTGTCCCCTGGGCGCCTCCCACAGTCCGCGGGGACGGACGGGGGTTCGGAGCCCGAGCACTCCGCGGCGCGCTCCCGCGACGCTTGTTAGTGTTCCGCAAATCCGCAGCGGGATCGCCCGCACAACCGGGACTCTATCCCAAAACGCCATTAAACGCGGCGGCGGGCGGGTATACGGGCTCGCCGTGGCCGCCGCTCGAGCTAGACCCCGTGGGATGGGGACGGAAACTGTACCCGTCTGGCGCGCCGAGGTCTTCAGGCGGGTTGATGTTCGGCCTGCACCATCAGGAGGCGGCCGGGGTGCACGCACAGCCTCGCGGGCCCGTCACATCCCTCAAGGAAGAACCCCTGACCAGAGCATGGATGACCCCCACTTCCCTAGTTGATAATACCAATAGCGTGGGTGTAGGCCGGGCGCACTTCGAAAAGCAGCCGCCCAGTAACCTGCGCAAGAGCAATTTTTTCCACTTCGTGGTGGCACTGTACGACCGAGCTGGCCAACCCGTGGAGATCGAGCGGACCGCCTTCATTGGCTTCATTGAAAAGGACCAGGAAGCGGAGGGGCAGAAGACGAATAACGGCATCCAGTACCGACTACAACTGCTTTATGCAAATGGCATCAGACAGGAGCAAGATATCTTCGTTCGGCTAATCGACTCAGTTACGAAACAGATTGTCATCGCCGTCGGCCGATTAGTGCCTAATCCCCACGCCCACCCGCCCTCTGGTTAA
- Protein Sequence
- MLTSGAIGISRVVLLLRRGRVPWAPPTVRGDGRGFGARALRGALPRRLLVFRKSAAGSPAQPGLYPKTPLNAAAGGYTGSPWPPLELDPVGWGRKLYPSGAPRSSGGLMFGLHHQEAAGVHAQPRGPVTSLKEEPLTRAWMTPTSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQIVIAVGRLVPNPHAHPPSG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00796312;
- 90% Identity
- iTF_00971020; iTF_00970195;
- 80% Identity
- -