Nnit020022.1
Basic Information
- Insect
- Nymphula nitidulata
- Gene Symbol
- gata4
- Assembly
- GCA_947347705.1
- Location
- OX374620.1:217785-221094[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-16 4.4e-13 49.5 3.3 1 35 415 448 415 449 0.97 2 2 7.5e-18 3.2e-14 53.1 7.5 1 35 476 509 476 510 0.97
Sequence Information
- Coding Sequence
- ATGGAGACGGGGACTCCCATGGAGGACGAAAAGCGGGAGAGGGAGCCCACGGAGGCTCTGCAGCTGGTGAAGAGCGAGGAGCGCGCGGAGCGGGCGCCGGCCGCCGAGGCCGCGTCCGTCATCACGCGCCGCGGCCGCACCATCACCGCCGCCGGACACATCACCGAGGCCGACGACGTCAAGGACGAGCCGCCGGAGCCCGAGCCCGGCTACCAGCAAGCCTCGCCCGCCGCCGCCCACGACGCCGCCCACGACGCCGCGTACGACGACGAGCGCCTGCGCCACGACGCCGACGCCGCGCGCTACCTCGCTTACAAGCACGAGTACCGGCCGCCGCCGCCGCCGTCGCCGTCGCCATCGCCGTCGCCCGGCGACAAGCGCGCGTCGCCGTACGCGCGGCGCCCGCCGGGCCGCGGGCTCGCGCTGCGCTACGCCGCGCCGCACCACGTGGTGGTGGCGCAGCACGACGCCGACGACGCCGCCGCCGCCGCCGCCGCCGCCGTCGTCTACCTGCCCAAGGAGCGCGGGGAGCCGCCCGCCTACGCCGAGGCGGCGGCCGACGCGCGCCAGTACGCCGCGCTGGAGCAGGCGGCCGCGGCCTCGGCGCTGGAGATGATCCAGAGCACGGCGCTGGGCAGCCAGCAGGCCGTGGGCGTGGCCTACCAGCCGGTCAAGTACGAGGCGCGCGAGCCCGAGCCGCGGCCCGGCACGTACGCCAGCCTGCAGCCCGTCACCGCGGTGCACGGCGGCTACGCCTACGCCGCGCCCGGCCAGAGCCCTCAGTACGCGGGCTACGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCTACGGCGGCAAGGAGTTGCTCACGCTGTACGGCGCGCGCGGCGACGAGTCCCCGCCCGGCCAGCTGCTGTACCGCAGCGACCCCACGCTGTCCTCGTCGTCGATGGCGCCGCGCGGCCACGTCGTCTACGGCTCCGTGCTGCCGCAGGCGCAGCCCGTCTACGAGGCCCCGCCCAGCCCCAACTCGCAGCAGGTGACGCTCTACGCTCCCGGAAACACGATACAGTACAAAGTGGGCGGTGAACACTACCTAGGCCAAGGAAGCGGAGTGGAGTACGTCCCGGTATCGGGCTACGAGGGAGGCCTGCTAGTCGAGGGATATACGTCGGCACCTACACAGTCTTGGCCCACTCACAATCTGCTGCCGATCGATGAAGGATTCGATCCGGCGATGGCGGGCATGGGCGAGGTGAAGGAGTGCGTGAACTGCGCGGCGGCCACGACCCCGCTGTGGCGGCGGGACGGCACGGGCCACTACCTGTGCAACGCGTGCGGCCTGTACACCCGCATCAACGGCGTCAACCGGCCGCCGCTCAAGGGCCAGAAGGCTAAACCTCCACAAACACTGTCGACGAACGGCAACCGGCGCGTGGGTGTCACGTGCGCCAACTGCCGCACCTCCAACACGACGCTGTGGCGCCGCAACAACAACGGCGAGCCCGTCTGCAACGCCTGCGGCCTCTACTACAAGCTGCACAACGTGAACCGGCCGCTGAGCATGAAGAAGGACGGCATCCAGACGCGCAAGCGGAAGCCCAAGAGCATGGGCGGCGGGCACGGCGCGGCCGGCCGGCCCCCGGGCCAGCTGTCGGGTTCTAGTTGGCGGGCTGGATGCGGGCAGCGTCGCATGTCAGTAGCCGCGTCACGTCTGTTTGCTTGCGCCTTACGTTATCTCAAGGGTACCAACGATAGAGTGCGCGGCGGCTGCGCAGCACAATTGCTCCTCGCAACTCCGCTGTACAGTGAACATCATAAATATATGTACACTTCTGACACCACAAAGTCTTCATTGCCACAACAAGAGACACAACCTTCTGTGTGTACACACATACATCTGATGCTAACTGGATATAGTTTCTGTGAAACTACTTGTCCTGTACATATTTTTATCAGTATGATGCCTAATATTAAGGGTTAA
- Protein Sequence
- METGTPMEDEKREREPTEALQLVKSEERAERAPAAEAASVITRRGRTITAAGHITEADDVKDEPPEPEPGYQQASPAAAHDAAHDAAYDDERLRHDADAARYLAYKHEYRPPPPPSPSPSPSPGDKRASPYARRPPGRGLALRYAAPHHVVVAQHDADDAAAAAAAAVVYLPKERGEPPAYAEAAADARQYAALEQAAAASALEMIQSTALGSQQAVGVAYQPVKYEAREPEPRPGTYASLQPVTAVHGGYAYAAPGQSPQYAGYGGGGGGGGGGYGGKELLTLYGARGDESPPGQLLYRSDPTLSSSSMAPRGHVVYGSVLPQAQPVYEAPPSPNSQQVTLYAPGNTIQYKVGGEHYLGQGSGVEYVPVSGYEGGLLVEGYTSAPTQSWPTHNLLPIDEGFDPAMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPPQTLSTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHGAAGRPPGQLSGSSWRAGCGQRRMSVAASRLFACALRYLKGTNDRVRGGCAAQLLLATPLYSEHHKYMYTSDTTKSSLPQQETQPSVCTHIHLMLTGYSFCETTCPVHIFISMMPNIKG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -