Basic Information

Insect: Nymphula nitidulata
Gene Symbol: -
Assembly: GCA_947347705.1
Location: OX374621.1:18263368-18273784[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0047 0.52 11.8 1.0 3 23 701 722 700 722 0.96

2 23 0.33 37 5.9 0.3 1 22 1134 1155 1134 1155 0.95

3 23 6.6 7.2e+02 1.9 0.3 1 22 1196 1217 1196 1219 0.82

4 23 0.0072 0.79 11.2 1.5 2 21 1229 1248 1228 1249 0.94

5 23 0.78 86 4.8 0.1 2 23 1257 1279 1256 1279 0.87

6 23 0.22 24 6.5 0.2 3 23 1300 1321 1298 1321 0.95

7 23 0.0065 0.71 11.3 2.3 1 23 1327 1350 1327 1350 0.95

8 23 0.12 14 7.3 0.0 1 23 1376 1399 1376 1399 0.90

9 23 0.0054 0.59 11.6 3.5 1 23 1404 1426 1404 1426 0.97

10 23 0.019 2 9.9 0.3 1 23 1432 1455 1432 1455 0.95

11 23 0.001 0.11 13.9 1.3 1 23 1468 1490 1468 1490 0.98

12 23 0.00017 0.019 16.3 1.8 1 23 1539 1562 1539 1562 0.97

13 23 0.0067 0.73 11.3 1.8 1 23 1622 1645 1622 1645 0.96

14 23 0.00091 0.1 14.0 2.0 2 23 1671 1693 1670 1693 0.95

15 23 0.085 9.4 7.8 0.1 2 23 1699 1721 1698 1721 0.93

16 23 0.65 72 5.0 0.1 1 21 1765 1785 1765 1786 0.94

17 23 0.001 0.11 13.9 0.2 1 23 1796 1818 1796 1818 0.93

18 23 0.00011 0.012 16.9 0.3 2 23 1908 1930 1908 1930 0.93

19 23 3.3e-07 3.6e-05 24.9 1.4 3 23 1937 1957 1936 1957 0.98

20 23 0.016 1.8 10.0 0.2 1 23 1976 1998 1976 1999 0.95

21 23 0.092 10 7.7 0.0 1 23 2021 2043 2021 2043 0.98

22 23 0.027 3 9.4 0.6 1 23 2049 2072 2049 2072 0.95

23 23 0.00025 0.027 15.8 0.4 1 23 2080 2103 2080 2103 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0047	0.52	11.8	1.0	3	23	701	722	700	722	0.96
2	23	0.33	37	5.9	0.3	1	22	1134	1155	1134	1155	0.95
3	23	6.6	7.2e+02	1.9	0.3	1	22	1196	1217	1196	1219	0.82
4	23	0.0072	0.79	11.2	1.5	2	21	1229	1248	1228	1249	0.94
5	23	0.78	86	4.8	0.1	2	23	1257	1279	1256	1279	0.87
6	23	0.22	24	6.5	0.2	3	23	1300	1321	1298	1321	0.95
7	23	0.0065	0.71	11.3	2.3	1	23	1327	1350	1327	1350	0.95
8	23	0.12	14	7.3	0.0	1	23	1376	1399	1376	1399	0.90
9	23	0.0054	0.59	11.6	3.5	1	23	1404	1426	1404	1426	0.97
10	23	0.019	2	9.9	0.3	1	23	1432	1455	1432	1455	0.95
11	23	0.001	0.11	13.9	1.3	1	23	1468	1490	1468	1490	0.98
12	23	0.00017	0.019	16.3	1.8	1	23	1539	1562	1539	1562	0.97
13	23	0.0067	0.73	11.3	1.8	1	23	1622	1645	1622	1645	0.96
14	23	0.00091	0.1	14.0	2.0	2	23	1671	1693	1670	1693	0.95
15	23	0.085	9.4	7.8	0.1	2	23	1699	1721	1698	1721	0.93
16	23	0.65	72	5.0	0.1	1	21	1765	1785	1765	1786	0.94
17	23	0.001	0.11	13.9	0.2	1	23	1796	1818	1796	1818	0.93
18	23	0.00011	0.012	16.9	0.3	2	23	1908	1930	1908	1930	0.93
19	23	3.3e-07	3.6e-05	24.9	1.4	3	23	1937	1957	1936	1957	0.98
20	23	0.016	1.8	10.0	0.2	1	23	1976	1998	1976	1999	0.95
21	23	0.092	10	7.7	0.0	1	23	2021	2043	2021	2043	0.98
22	23	0.027	3	9.4	0.6	1	23	2049	2072	2049	2072	0.95
23	23	0.00025	0.027	15.8	0.4	1	23	2080	2103	2080	2103	0.96

Sequence Information

Coding Sequence: ATGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAAGCGAATTACAGCCGATTTTTCCTACCACCAGTTCGGATGAGTCGGAAGCTCCCGTTCTTGCATCAAAAATAAAGGATTGTGTCTCTGTTCAGATAAGCGAGAATGATGACCTGCCAACTAATATCTGCAGGAAATGTGTGGATAATGTCAACAACTGGCATATATTCAAATCAGTATGTGAGAGGACCCAAAACAAACTAGAGTTACTGATTAAAAAGGATGGAAGCCAACTAGAAGAGATTCAAATAAAGAGTGAGCCTTTGTCTGATGAAGCTTATGATGAAGGTGTGGTTATTGATGGCTCATACCCAGAAAATGAGAATGCCACAGGCTCAAACAAGGTGCAACCAGAAGGCCCGCCCATACTGGCATCATTGGGGCTCACACCAAGGAGTGATAAGAAATTTATAGATCCTCGATTGGACTGGCAACGGGTCCATGCAATTCTGGACATTGTTCAAGATGATGATGTCATAGACTCACTGCAGTCCATAGAGGAATGTGATGTTGTCCAGCAATCTGATCACAACTCTGACTCTGAGGGGGAGCTTCAAAGTGAAATAGATGACAGATATGTTGACTACAAAAATGGATATATTTGTAAAAATCAGAGAATACTGTCAAGGATACCAAAACTTTCTATATCACATAATAATGCAAAAATCAGGATGGCCGCTAATCTCAGAAAGCGTAAAATGGAAGAACCAAAAAATTGTTCACACCCAAAACATGCTTGGAAATTGTTATTTACTGATGACTTAATTGAACTAATAGTAGCATCAACAAACAACAATATACTAAAAATGGGACACAGCATTGCTTCTTCCACCAATATGGGTGAAATAAAAACAATTATGGGAATTCTGTATCTTCATGGTGTGATGAGACCTACTCACCAACATACCAATGACCTCTGGAATAGAGATTTTGGTGTTTCTTGTGTCAAAAATGCAATGAAATACGACCGCTTTAAGTTTCTCTTACAGAATATATGCTTTGATAATGATGATGATGAAAATATAATTAGGTTTGATGTCATGAACAGAATGAGGAAGGTGTTTGAAATATTTGCCATGAACTCAAGAGGATCATTTGAAATAAGCAACACTGCAGTGGTTGATGAGATCATTGTTCCTGTGTATGGTCCTTGTCCATTTAGATATGGTATAAAAAGGAAGCCTTTAGAATATGGCTTGAAAATGGTGCTGTTAGTTGACTCAAGCAATTTTTATGTCAACAATTTGGATGTAATTACGGACCCTTACTTTGGTGCCGAAGAGATTGTAAAAAAGCTTGTTCAGCATTTGTCTGGCACGGGCAGGACCATTGTGGTTGACAGTTGGTATACATCAATTGATTTGATCAAAATACTCAAAAAAGAATATTCTTTATTCACAATTGCAGCTGTCCATCCGAATGATGATATAATTCCACCACTCTTTCTCTCAGAGTATAGAAAAGTGCGAACAGTTCTGACTGGTTTCTTAGATGATGATATTTTACTTACCTCATATGTGAATAATTACTCAAAGTCTGTGAACGTGTTGACAAATGAACCACGTTTTTATAAAAAAGGGTATGCCAACCACACTACAGCAGCTGCATCTTATAAAAAAAATCATTCTGCTGTAGAAGTAATAGATGTTTTGATGCATTACTATACTACTATGCAACATACAAATGATTGGACAATGTCACTGTTTTTCACATTGCTCAACATTGCTGCAGTGAATGCTCAAGTGATATGGTCCTCGCAGAATAGTGGTGAAATAAAACGGAGGATGTTTATATTAGAACTGGCAACAAGTTTACTAGAATATGAGCAGCCAATGTCTCCTATAGACGATGTCCCACTTAGAAAACAAAAGTTTTCTAGTGGCTTGCAAGGTGCGGAGAGCGAGAAAGACGAAGAGGAAGATGAAGAGGTGACTGAAAAAGTTCAACCAGCTGCAAAGGCAACTCATATGCCGGAAGTATCTATTACGGTAATGCGTCCTACTGGTGAAACTTTGCATGCACGCCAAGGCATCCAACAACTCGCTTCTAAAGATTGTCTCGTATGCGGTAGATCCTACCGATATTCTCACAATGCCAGGCGACACGAGCTGACAGCTCATAGTTTTGATAGATACACAAACAAAATAACACACAAAAAACAACCCTCACATATGCAACCAAAACTAAGACCAAATCCATTCAATCCTAAAGCGCGGTTAATGCCAAATCCAATAAGCCATAAAATGCAACTGATATCTAAACCCATGCCAAATAAAATGGTTCCACACAAGGTCATTACACCACCGAAACCAATTCTTATTAAATCATCGAAGGCATCACAAAACAGTTTACCTTATCCATTACGCATCAAAGCCTTAAAAGAATTACAAATAAAGAAAAGGGAGCCACAAATTTTAAAGACTCTTTTGACATCTAAACCAGAAGTGTTAGTATCAGAGCCAGAAATTATTAATTCCGGTCCCGAAAGTCCAGAAACGTTGATTTCTGAACCAGAAATTGCATCGTTTCAAGTGGAGACAATTCTCTCTGAACCAGATGGTTACGATCGACAGGTAGATAACTTTGATCAACAGCAAGATTCTTATGAGCAGCCACAGGATGGTTATGACCAGCAAGCAGACTCGTACGAACAGCAGGCAGGCGATGAAGGGGAAGGCGATATGACTAATCGTCAAGATCAACACTACGATACTGTTGATATGGAATCCGACAATGAAATAGAAATTGCTCGTGAACAAGAAAACGAAGCAGAGGAAGATGATCAGCAAATGGATGAACGCGATGATAATGTTCAACACGATGAAGAAAATAATATAGACGGAAATCAAAGCGAGGTTGGAAAAGATGTGGAAAACGGGGAACATGAGGATAATATTGGCATTGTCGATAATGGTGAAAGTAAACACGACGAAGAAGCTCATGAAGCTGACGATGGTAATGTCAATGAGGAAAGAGAAAACGAAGAACAAGATAATCATGACGATAATCTAGAAGAGGACGATGATCTGCCACCTATGGAAATAGCCCCTGTTGTCGAGATAAACGAGGACATGCAAACAAACTCGTATAACAGCGAGCATAATGAGGAAGAAGAGGAGGAAGAGCTTGCAGAAACTTCTGAATTAAATGACACAACCGACGGTGCTGATGGAATCAAAGAAATAGATCCTGATAAACAGTATGTAACAAAAACACAGCGTGATTTCATTGCCAAATACCGCGATGTTATTGAACAAATCAACACAAAACGATGCCTTTGTTGCGATAGAGAGCATCCACGTCGAAAAGCTGTTATACAACATTTACAGAAAAATGGGCATAAAGTCCCTAAGCACACTTGTTATAATTGTGTTGTTACATTTGGACACATCGGCGCACTGCTTAGCCACATGCGATCTAATTCGTGTACTGATCTTTGGAAAATAATCTACAACGAAAAAGGAATTACTGATGACTTGGTTTTACAAGATCCGTTGAACAATAAAGCTCAGTATAAAGACATTTTTAATGCAAGATCATATGCTTGTAAGCTATGTCCAGCTAAATTCCAACTGAAACAATTTATAATGAAACACGTTTTGGATGTTCATGAAGATGGCCAATCTCGTTTGCCGCTCCATTGTGTCCATTGTGGGGCGCGATTTAAAGACAAGACCCTTATTAAAAAACACATTCGCAACGGAGAATGTACTGTTTACATTTCTTGTGATATGTGTAGTGAGAAATTTAGAAATATACTGGAATTCAATGATCACGCATTGGCTGTTCATGCCGGTAGCTATGATCAATCTGACAATCAAAATAAATGTGTCGACGAAAGACCCACGGATTGTCCAATATGTGCTAAGAAGAACAGTAGCTACCCGAATTTGATTAAACATTTGAAACTTATTCATAACGAAGAAAAACCGCACTATTGCCAACATTGCGATCTTAAATTCGAGTTAGCTACTGATCTAAACAAACACATTTACGTGGAACATTCCGATAGAAGCTTAGGTGTGCAAAGTAGTGAACCAGACATGTCGCTCGTAAAAGAAGAAGCTGAAGAGTATCATTATTCTTGCACAGAATGTAATGCCATTTTTGAAACAGTCGATGCATGGACGGATCATCAGGTCGCAGAACATAATCAGGTCGCGCATCATTGTGACCAATGTGACAAAAAGTTCTTGCGACCCTCTGAGCTGGCCGAGCATAAGAACACCCACTTGCGCGTGAAATTTTATCCTTGTAGTGTTTGCAGTAATTCATACAGTACTCCTCAGAAGTTGTCTGAACACGTCCAGCAGTCCCATCCTGGAGCCGGAGCATATACAGACACAATATCTGATTTTTATTGCGACATTTGCATAAGATCATTCAAAAGTCGCCAAGCTTACTCTAATCATATGCGTATACATGCAAAAGTACCAACGACTAACAGGAGACCTGGAGAATCAAAAGGTTTTGCACCACAAATCATCGGGAAGCCTATTAAACAATTCCCGGTCCAACATCTTAATTTAGTCCCATACAAACCGAATTGTAATGTTCCTAATGCTCCTTATTCATGTGATATTTGTGGTAAAGGATTCATGCATAAGAAAAATATATGGAAACATAAAAAAGTACTACATGCCGATCTTGTTAACGACAGAAATGACAGCGAAGAAAATACTATGCACGCTTCTACTGAAGAGGACGAGTACAATCCCGACGAAAATGGAGCTTTGCTTTCTACGCCACAGTTCAATAGCTTCAACTTTTCTAGTTTTAACAACATACAGCAACAGGTGCAGCAAGATCCAACACCGTTTTCATGTGAACTATGTTTCAAACGATTCCCGCTTAGAACAAGTTTGTGGAAACATAAACGCGCTAAACATGGAATCGTTAACATCAACACTAGTGGTTCTGAGATGCAAACTCAAGGAACTCCCAATGAAGCGGGCAATAGATCAAGTTGTACAATTTGTAAGATCTCGTTTTCAGATAAAAAATCATACTATCGACATAGAAAGAATGTCCACAAATCGACTATACAGATGTGCAAAATTTGTGGTAAGCCACTCAACTCTACATTGGAGCTGTATGAGCATTTAAAGGCTGCGCACGCTCGTGAGTTATTAGGCTACAACGCCAATCAGGGTTCTAGTAAGATGCAGGATGTAAAACAAGAAATGGAAATTGAATATGAAAATGACCAAGATTTAGCGGATCCTAGTGTAGAGTATCAAGCGCGGTATCCCTGTGATACATGTGGCAACCAATTTGTGGGTATGCTCGCATTACAAAATCATCAATGCATCAACCAAGTAGCATCGCAACCACAAACTTTCGATTGTGAAATTTGCAACAAGAGTTACACTTCGATAGCGGCGTTAAAGAGCCACAGAGGCTGGCATTTACGATCACCAGATGGAAAAGCCGCTGCTAATAACAGTGGACTTTGGATGCCTCATAATAAAGTAACCAGTAAAGTTAGTAAACACGAAGTGGTAGATGCGTCGCAACTAGCTCGCGTGCAACACGTAGCGCCTGCGACAGTAGTAGCCAAAAGAAGGCTACCTCCGGAAGTAGAAGTCACTGTCGTGAATCCTAATAAAAAGATGCGCTCTGATGATTCCATCGAATTAGACCAGCAGAATTCAGCCATGGGGTCTGATGATAGATACTGTACAATTTGCGACAAAGAATTTACGAAGCGTGCTGCTTACCAGCGCCACATGGACGAGGTTCATCAGCCCAATTCTGTTTTCTGTCCTGTATGCGACAAGAGTTTCACTCGGAAATCTACGTTGCTTGTTCATATGAAGAAACATTACGAGGGGGGAGAAGGTAGTTCTTCGGGGACTGCTCACGTAGACGAGGAGAATTACGCTTGCGATTTATGCGGTGCGCAATATGATACTGAACAGGCTTTGAAGATTCATCGGGCGAGGCACCACGGTGATGATTCTGGTGAGTCCGATGACGATGATGGCAGCGTGGCGATCGCGCAGCCAGGTGAGTTCACGTGCGGTCAGTGCGGCGACGGAGTAGCCACCCCGCGAGACCTGATCGCCCACCGCTCTATGCACGCAACACCCACCAAATTTTTCTGCAACATTTGCAAAGTATATTTCGCCAGAGCATTGGACCTGTCTTCGCATACGCGGGCCAGACACGCTGACAACGAAAAGGTCTTTTTCCCTTGTGCCATGTGCGACCGTTTCTATATGAACAAGAAGAGTTTGCAACGACACATTGAGATGGCACACTGA
Protein Sequence: MSVNYDRVCRLCLSSRSELQPIFPTTSSDESEAPVLASKIKDCVSVQISENDDLPTNICRKCVDNVNNWHIFKSVCERTQNKLELLIKKDGSQLEEIQIKSEPLSDEAYDEGVVIDGSYPENENATGSNKVQPEGPPILASLGLTPRSDKKFIDPRLDWQRVHAILDIVQDDDVIDSLQSIEECDVVQQSDHNSDSEGELQSEIDDRYVDYKNGYICKNQRILSRIPKLSISHNNAKIRMAANLRKRKMEEPKNCSHPKHAWKLLFTDDLIELIVASTNNNILKMGHSIASSTNMGEIKTIMGILYLHGVMRPTHQHTNDLWNRDFGVSCVKNAMKYDRFKFLLQNICFDNDDDENIIRFDVMNRMRKVFEIFAMNSRGSFEISNTAVVDEIIVPVYGPCPFRYGIKRKPLEYGLKMVLLVDSSNFYVNNLDVITDPYFGAEEIVKKLVQHLSGTGRTIVVDSWYTSIDLIKILKKEYSLFTIAAVHPNDDIIPPLFLSEYRKVRTVLTGFLDDDILLTSYVNNYSKSVNVLTNEPRFYKKGYANHTTAAASYKKNHSAVEVIDVLMHYYTTMQHTNDWTMSLFFTLLNIAAVNAQVIWSSQNSGEIKRRMFILELATSLLEYEQPMSPIDDVPLRKQKFSSGLQGAESEKDEEEDEEVTEKVQPAAKATHMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTAHSFDRYTNKITHKKQPSHMQPKLRPNPFNPKARLMPNPISHKMQLISKPMPNKMVPHKVITPPKPILIKSSKASQNSLPYPLRIKALKELQIKKREPQILKTLLTSKPEVLVSEPEIINSGPESPETLISEPEIASFQVETILSEPDGYDRQVDNFDQQQDSYEQPQDGYDQQADSYEQQAGDEGEGDMTNRQDQHYDTVDMESDNEIEIAREQENEAEEDDQQMDERDDNVQHDEENNIDGNQSEVGKDVENGEHEDNIGIVDNGESKHDEEAHEADDGNVNEERENEEQDNHDDNLEEDDDLPPMEIAPVVEINEDMQTNSYNSEHNEEEEEEELAETSELNDTTDGADGIKEIDPDKQYVTKTQRDFIAKYRDVIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTDLWKIIYNEKGITDDLVLQDPLNNKAQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRLPLHCVHCGARFKDKTLIKKHIRNGECTVYISCDMCSEKFRNILEFNDHALAVHAGSYDQSDNQNKCVDERPTDCPICAKKNSSYPNLIKHLKLIHNEEKPHYCQHCDLKFELATDLNKHIYVEHSDRSLGVQSSEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLSEHVQQSHPGAGAYTDTISDFYCDICIRSFKSRQAYSNHMRIHAKVPTTNRRPGESKGFAPQIIGKPIKQFPVQHLNLVPYKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLVNDRNDSEENTMHASTEEDEYNPDENGALLSTPQFNSFNFSSFNNIQQQVQQDPTPFSCELCFKRFPLRTSLWKHKRAKHGIVNINTSGSEMQTQGTPNEAGNRSSCTICKISFSDKKSYYRHRKNVHKSTIQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKMQDVKQEMEIEYENDQDLADPSVEYQARYPCDTCGNQFVGMLALQNHQCINQVASQPQTFDCEICNKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPHNKVTSKVSKHEVVDASQLARVQHVAPATVVAKRRLPPEVEVTVVNPNKKMRSDDSIELDQQNSAMGSDDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGEGSSSGTAHVDEENYACDLCGAQYDTEQALKIHRARHHGDDSGESDDDDGSVAIAQPGEFTCGQCGDGVATPRDLIAHRSMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00006453;
90% Identity: iTF_00006453;
80% Identity: -