Nnit005221.1
Basic Information
- Insect
- Nymphula nitidulata
- Gene Symbol
- SNAPC4
- Assembly
- GCA_947347705.1
- Location
- OX374640.1:7723032-7725269[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 9.1 1.6e+04 -3.0 0.1 32 39 100 107 96 111 0.82 2 5 2.3e-07 0.00041 21.3 0.1 1 45 256 302 256 303 0.94 3 5 4.2e-08 7.5e-05 23.6 0.1 2 44 310 356 309 358 0.93 4 5 1.7e-11 3e-08 34.5 0.0 1 43 362 404 362 407 0.95 5 5 5.1e-09 9.2e-06 26.6 0.0 3 45 414 458 412 459 0.95
Sequence Information
- Coding Sequence
- ATGGAATTCGACACAGATAGTGATGAAGATACTGAAACGCAAATCAAAGACCTAAAACAACTCACCGCTGTTTTAGAAGCCGCTGAACCTTCTTCAAGCACTGCCTCTAGATTATCCTGGTCGACTGTTAGTGCGCTGAGCTCATCAAATAAATTTGAAGAATATTCTAAAATAGAAACTGCATTAGCTCTCAATAAGTTGACTGACGATAAACTTATTCGACTGGAGAAAATACTCATCGAAAGATTAATTCAATGTAGAAAGAAACTTGCAGAATTTACTGTTACAGAAAATTACGATCGAACTGATAAAGTCTGTAGATTCAGCTATAGGCACTGTGGTAAACCATACTTCAAAGACAGAGATGGCTTCCCACCTCCTGATAATGAAGACACTGTGCTTATGAGAAAATCTGGTATGTATGACTTCTCAACCATCTCATCTGTTCCAGGCTGGACTGTTAAGGACAAAAGTGACTTTCTTGCTCTATTGCTCAAGATGTCTAAAGAAATCAGGGTTAAAGAATTAAATTCAAAACTTGCGCAGCTTTACCGTGAATCAAAAAATAAGGATATAAAAAATGACAGACAAATTATTACTGTCAAACGCGAAATTACTAGGGTGAACAAAAAAACTTTAAAGGAATTGGCATTACCTATCAATGAAGACTATGATTGGGACACTATTTTTTGTAAGTTGAATCGTCGGCATAATGTACATGAGTATTGTGCTTTGTGGAGATTATTCTTGCACCCCAGTATAAATAAAGATGTTTGGAGCAAAGCAGAGCATTCAAATTTACAGAAAATTGCTCTGAATTATAATATGCAGGATTGGGACTGCATAGCACATGAACTTAATTCCAACCGTACTGCATATCAATGTTTTGTGTATTTTAGGACAAATATGAGTAATACATTTACAAATCAAAAATGGTCCAATGAAGAAGTGGAATATCTAAAAAGGCTTATTGAATATTATAGAGAGGATGATTATATACCATGGGGAAGAGTTGCTGCATCTATGGAAAATAGAACTAAAATTCAAATCTACAACAAGTATATGAGAGTCATGGAGTTGAGGAAGGGCAGATTTTTGCGTGAAGAAGATGCTGTAATATTAAATTGTATAGAAAAATATGGACCTGACTTCAAGAAAATTAAAAATTTCCTTCCTGGTAGATCTGCTACACAGCTAAGAATTAGATACCAAGCACTAAAAAAAACAAGAGTCTCAACTGTTTGGACAGTAGCTGAAGATAAGAAATTAATTCAGTTGATGTCCAACCAAGATTCTGCTACCAATTACTCTAGTATTAGTAAACACTTACCTGGGAAAGACCGCATACATATTAGGGCTAGATATATAACTTTAATGAAATGGATGCAAAGGAATCCAAATGTTGATATTATTCATGCACCTCGTCGTGGTGCTAGACGATTAGGTCATGGTCAAGCGGCTGATAATTTGAACAATGCAATTGAAAATTTAAAAGACAGAATGCAGACAGAAGTTGATTATAAAAAATCAAAAAGAATAACAAGGGATTCAACAGAGGAAGACATAGATGATGCTATTCTGGCTTTTATGGTTAATGAAAATATCAAAGATTCAGACAATCCTTCATCAAGTAATGAAGACATACTTGTAGCTTATGACAATTTATTAATTTCTGCCGGAAGTTGGAACGCAACCAATTTGCAAAAAATACTTCTCATGTTGAAAGCCAATATAGATGTAAATTTATTTAGAAAAAGTTTATTTCATGAGACTTATCCTGAATTGATTAACCCTGAACAAGAAGTGTGTTTAGTAAAAGTCAAATCATACTCAAAGAAGAATGTAGTGAATACTATAAAAATGAATAAAGCCCCTGACATATGGGGTAACAAAACATTAGGTCCTATAGAATATGTTTTACCTCCACACTTGGCTACAATTACGGGGTGTAAGGCATTAATAACTCATGTCAGTTCAACAAAAACATCAAAATTTGACCTGAATCTTTCAAAAAGAAAGAATTTGTTTTTCAGAGATCAACTGTCTATCTTAATGGAGCGCTTTAATGTTCTTTTTGTATGGCCCATGTTGCTTTCTAATGAAATTCCAAAAACAAAGAAACCAACAAAAACAGAAATGAGCAGTACAAGAAAATTACAAAAATGCTTAGTTTTTGAAGATGATACTGATGATAATTTAGAGAATACTGAAGCTAAAAATGATGAAGCTATTAACTGA
- Protein Sequence
- MEFDTDSDEDTETQIKDLKQLTAVLEAAEPSSSTASRLSWSTVSALSSSNKFEEYSKIETALALNKLTDDKLIRLEKILIERLIQCRKKLAEFTVTENYDRTDKVCRFSYRHCGKPYFKDRDGFPPPDNEDTVLMRKSGMYDFSTISSVPGWTVKDKSDFLALLLKMSKEIRVKELNSKLAQLYRESKNKDIKNDRQIITVKREITRVNKKTLKELALPINEDYDWDTIFCKLNRRHNVHEYCALWRLFLHPSINKDVWSKAEHSNLQKIALNYNMQDWDCIAHELNSNRTAYQCFVYFRTNMSNTFTNQKWSNEEVEYLKRLIEYYREDDYIPWGRVAASMENRTKIQIYNKYMRVMELRKGRFLREEDAVILNCIEKYGPDFKKIKNFLPGRSATQLRIRYQALKKTRVSTVWTVAEDKKLIQLMSNQDSATNYSSISKHLPGKDRIHIRARYITLMKWMQRNPNVDIIHAPRRGARRLGHGQAADNLNNAIENLKDRMQTEVDYKKSKRITRDSTEEDIDDAILAFMVNENIKDSDNPSSSNEDILVAYDNLLISAGSWNATNLQKILLMLKANIDVNLFRKSLFHETYPELINPEQEVCLVKVKSYSKKNVVNTIKMNKAPDIWGNKTLGPIEYVLPPHLATITGCKALITHVSSTKTSKFDLNLSKRKNLFFRDQLSILMERFNVLFVWPMLLSNEIPKTKKPTKTEMSSTRKLQKCLVFEDDTDDNLENTEAKNDEAIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00006229;
- 90% Identity
- -
- 80% Identity
- -