Nnit005346.1
Basic Information
- Insect
- Nymphula nitidulata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_947347705.1
- Location
- OX374640.1:10926849-10970867[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-14 2.3e-11 44.1 0.0 1 39 270 309 270 315 0.92 2 2 1.4e-18 1.7e-15 57.3 0.0 1 43 475 518 475 520 0.95
Sequence Information
- Coding Sequence
- ATGATACATGCATTTCAGAGTCTAGAACGGGTGGCGGAGGAGTTGATGGGTCGAAGAAAATGGAAACTATGCCAGGACGCATTAATACCAAAGAGGAACGAGCCAGAACCTTCGAGCGACGACTCTATGCCCGGCACCGACCCCCCTCCAGCCCTCAAGATCAAGACCATAGAGCAAATCAACGCGCCAGGGAAAGAGGATACAGAGAAGAGGCGACCAGAGACAATCCTGGAGAGCCTCATCAAAAGGCCGGCTACCCAGCCGAAGTTGGAGCTGCCAGAGGAACCCACCGACTGGAAACCAGCGGACAAGTGCTACTTCTGTGTGGACGGGGAGGGGGGTGAGACGGCGGCTGAGGGGGGGCAAGGCGGCGCGACCAGTCCAGCGTCGGAGTCGGACAGCAGCTCGGTGTCGGGAGCCAAAAGCCCGGCGGGAGCGCCGCCGCTGCTACAGCACCTGCTTCAGTTACAGCTGCAGGCACAGAGTCCACAAGCCATCGCGCAGTTCCAGCAGATGGTGGCAGCGCTAGCGACGCTGGGCTCAGGGCTGGTCCCGCCGGCGGTGCTGTCGCAAGTGTGGCTCATGCAGCGGCTGGCGCAGAACCGACACGTGACGGACCGGCTTCCGGAGGTGACCGACAAGCCCCCGACCTCGTCGTCTCCAACCCTTGCTGAACAGCCACTGGACCTCAGCGCCAAATCCACCTCCAGCACCAGTGGGACACCGCCACCAGACGCCAAGATCTTGGACAACAGGTTGAAGAGAAGTGTTGTCGATGCTAGCAACAACGTAGCACGACGGGCGTACACCGATGACGAGCTCCAGTCAGCGCTCCGCGACATCCAGTCGGGGCGGCTGGGCACGCGGCGAGCCGCCGTCGTCTACGGCATCCCGCGCTCCACACTACGCAACAAGGTCAACAAGTTTGGCCTTGCGTCCGAGCAGCATGACTCCGAACTTGACAGTGATTCCGAGCGACCGGAGTCACCCCCATCCGTCATATTAAAGATACCAACATTCCCCCCACCTGACGAAAAGAGCCCTTCTCCAGCTACCCCCGTAACGACCCCCGTCACACCTATAACTCCACACATCCCGCAGCCACAACCGCCACTCAATCCTCCTCCGCTGCCTGCGTTCTTCGCTGACCCGCCGTCTAATCAGCACCTGTTCACATCTATAAACGACGTGATAGTACGAAGCATTAGTCAGAAGTTCCAGCAGCTTCCGGATCGACCGCCCCAACCTGCCGACCTCCAATATATGCGAGCGCCGGACCGCCACGTTTCCGTCATTAAAACTCCTCCGGAGAACCAGAGGAATTATCCGGCACCCTGCAACTCGAAAGCGCCGACGAACAACGGGCAGCCAGCCACCGGCGGCAAAGGCACGCGGCCCAAGCGAGGGAAGTACCGGAACTACGACAGGGACAGTCTCGTCGAAGCGGTCAAGGCCGTCCAGAGGGGCGAGATGTCGGTGCACAGGGCCGGCTCCTACTACGGCGTGCCGCACTCCACCCTCGAGTACAAGGTGAAGGAGCGACATCTAATGCGGCCGCGGAAGCGGGAGCCGAAGCCCCAGCAGGACCCGAAGCCGCCGCCGAAGCCGCAGCCGAAGGCGCCGCCGCCGACGAAACCGTTTTCCAACGGGCTCAACGGGCCGGAGACGCCCGGGTACCCGGCAGGCTACCCGTTCTGGGCCGGCGCCGGGTTCCCGCCGCCGTCGCCGGACCTGTACGCATCGCACATGATGCGCCGGTTGCGCGAGGAGGCGCCGCCGGCCAACGGCTCCTTCCTCGAGGGCATCATCCGCTCCAGCCTCGAGCGGCCCGGCGCCGCGCTCATGCAGCGGCTGGCGGAGCGGCCGCCGCCGCCGGACGCGCCCAGCCTGCTGCGGCGGCTCACGGCCGAGCCCGGCGACGAGCCGCCGGCGCGGCGCGCGCGCGTCGGCAGCTCCGACCGCCAGCTCGCGGCCGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGCCCGCGCAACGGCACGCCCACGCCGCCCGCCGCCGAGCCGCCGCCCGCGCCCGCGCCCGCGCCACGATCTCCTCACTCTTGTGATAATATTATGTAA
- Protein Sequence
- MIHAFQSLERVAEELMGRRKWKLCQDALIPKRNEPEPSSDDSMPGTDPPPALKIKTIEQINAPGKEDTEKRRPETILESLIKRPATQPKLELPEEPTDWKPADKCYFCVDGEGGETAAEGGQGGATSPASESDSSSVSGAKSPAGAPPLLQHLLQLQLQAQSPQAIAQFQQMVAALATLGSGLVPPAVLSQVWLMQRLAQNRHVTDRLPEVTDKPPTSSSPTLAEQPLDLSAKSTSSTSGTPPPDAKILDNRLKRSVVDASNNVARRAYTDDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLASEQHDSELDSDSERPESPPSVILKIPTFPPPDEKSPSPATPVTTPVTPITPHIPQPQPPLNPPPLPAFFADPPSNQHLFTSINDVIVRSISQKFQQLPDRPPQPADLQYMRAPDRHVSVIKTPPENQRNYPAPCNSKAPTNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQDPKPPPKPQPKAPPPTKPFSNGLNGPETPGYPAGYPFWAGAGFPPPSPDLYASHMMRRLREEAPPANGSFLEGIIRSSLERPGAALMQRLAERPPPPDAPSLLRRLTAEPGDEPPARRARVGSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPAAEPPPAPAPAPRSPHSCDNIM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01124528;
- 90% Identity
- -
- 80% Identity
- -