Nurt011619.1
Basic Information
- Insect
- Nymphalis urticae
- Gene Symbol
- GATA-B
- Assembly
- GCA_905147175.1
- Location
- LR989985.1:92629-100993[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-18 2.5e-14 53.2 3.9 1 34 150 182 150 184 0.97 2 2 4.1e-19 1.4e-15 57.2 7.1 1 34 218 250 218 252 0.97
Sequence Information
- Coding Sequence
- ATGCATATTTGTCGCAGCGGAGGCGGTGGAGGCGCGGCCTACACGCGCTGCGCGTACCCGACCGCCGGCTCGCCTTACTTCGGCAACGGTGCAGACCTCACGCAGCCGCAGATATGGACCTCGGCCGCAGGAGGATCACCGAACTACGGTACTGCTAGTGGTGCTGGCTCAGTGCTTGGTGAAGAATACGGTGAGACAGGCGAGGCGGGCGAGGGCGGAGGCGCGGGAAGCGGAGGCGCTCTGCCCGCCTTCAGCGCTCGCTTCGGTGGCGCCTTCGCCAGCGCCACCTCCAGGCCGTCCACTGTATACGGCACCACCGCGCTGGCTACGAACGCTTATGCACAACCCGAGGTATGGAGTCTAGACGGCAGCCGACGGCCGCAGCTCTCCGCCGCCGCCAGCCTCTCAGCCATCGATATGGCGGAGTTTTTCACGGAGGGTCGCGAGTGCGTGAACTGCGGGGCCATCCACACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTCAAGCAGCCGCGGCGGCTGGTACGTCAGCGGCACGCGGCGCACGCGCTGGCGCCCGCTCCCGACATGGGCACGAAGCGGCCCGGCATGTCTTGCAGCAACTGTCACACGACCACCACCTCGCTGTGGCGACGCAATGCGCACGGCGAGACGGTCTGCAACGCCTGCGGCCTGTACTACAAGCTTCACAACATCAACCGTCCGCTCGCTATGAAGAAAGACTCCATACAGACGAGAAAGCGAAAACCTAAGAACAGTATGAAGGCGGAGAGAAGTTTGAGTAAAAGTTTAGTGAACGCGGCGCACGCGGCGCACTCGGCGCACAACACGCACAACCCGCACTCAGTCGGACCCGCTGTTAAAATCGAGAATCTACTAGAGGGCGGCGCGAACGGCGGCGCAGGCTCGGGCGGCACGCGCTCCCCGCTGACGCTCGGCTTCTACGTGCAGCAACACGCAGCCGCCGTGAAGCTGGAGGAGCCGCCGCCCGCGCACGCGCACCAGCACGCGCACCAAGCGCACCACCCGCACCAGGCGCACCACGCGCACCACGCGCAGTCCTTCTACGACGAGACGGAGTACCGGCGCGCGGAGCCGCAGGAGCGCCTCGAACGCCCGACCGTCGTGTCGCTGGGCAGCTGA
- Protein Sequence
- MHICRSGGGGGAAYTRCAYPTAGSPYFGNGADLTQPQIWTSAAGGSPNYGTASGAGSVLGEEYGETGEAGEGGGAGSGGALPAFSARFGGAFASATSRPSTVYGTTALATNAYAQPEVWSLDGSRRPQLSAAASLSAIDMAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRHAAHALAPAPDMGTKRPGMSCSNCHTTTTSLWRRNAHGETVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKNSMKAERSLSKSLVNAAHAAHSAHNTHNPHSVGPAVKIENLLEGGANGGAGSGGTRSPLTLGFYVQQHAAAVKLEEPPPAHAHQHAHQAHHPHQAHHAHHAQSFYDETEYRRAEPQERLERPTVVSLGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00796987;
- 90% Identity
- iTF_01080378;
- 80% Identity
- -