Nurt004532.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nymphalis urticae
Gene Symbol
JARID2
Assembly
GCA_905147175.1
Location
LR989982.1:8733169-8755868[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.6e-16 2.6e-12 47.6 0.1 7 89 552 637 548 637 0.87

Sequence Information

Coding Sequence
ATGGTTTCTACTAACTGGAAAGTTCAGGCCCAGCGCAAGTTTGCTCAGGGAGCTTTCGTGCCACCAAGTCCAAACATTATCAATACTCTTATAAACAGAAGGGTAAATACAGGCACCGCCAATGAGTCGCGATATTTTTTTCGCCACAACACTTCTGCAAGGCGCCTGTTAGACTCAATTTCATTTGAAGGTATCCACACTCATAAACCAATTGTTGTATTGGAAAGATTAGAGAACCAACAACAATTTGTACAAACGGAATACCAAGATGATCCTAACGATGACTTATTAGTGCCGTCTACACGTTCTGAACCGTCAAATATCGTAAGAAGTTTACCTTCACGGAGAAAAGCTACAAATCAAAGTTCTACTGCATGCTTGTGCTCGACTTCAAAAGGTGAAAAGAAAAAAGTTCAATTAAAAAGGAAACGTGTAAAAAGAAAATATCCTGTCAAAACGATCAGACATAAAACAAATAAGAAAAAAAAATCTGATATGAATTTGAGATCATCCCGACAAGAGCCTACCGTCGATACAGATTTTTCTATAGATGATGATAAGCCATTGATGTACTATACCAAAAGAGGAACAAAACGAAACGGCAAAAATCAAGAAAACCAACAGGCTGCGTCGACGACCAACAAAGGTGTTGCTCAAACAACGCCGGTTGTGAAAATAGAACCTCTCAAAGAAAACGATGGTTTCTCAGTACCGGAAGTGCCAGTTCAATTTCAAGTTCCTACTACGAGGGCTGGCGTCCGTACGGGATCGGTACCTAAATATCGAACTCCAGCTTTATGGGATTGTGCTTCTCACGTCTCGGACTCGACGAATTTGTCAAGAGCTCCGTCTCCGAAGACCACCCTTAATAAGAAAATCCGGGCAAGTGCGAGTCGGACTCGCGCGCTGAGAATTCCGTACCACTACACAATACTGAAAGATTTACCAGCTTACGCTTCTCACATGGATTTACCAAAATCACCACCTCAGAATATGGGTGATGCATCTCAGTTGGAGACGGTACCTCAACCACTCCACGAGAGTTTCGATGAGAATGAGGCTCAAGCAAACGTTTCTTCGCTGTATAGTAGTAAAGGAATTGCAAACTGGATGAGTAACTCACAAGCTGCAATTGCAGTTCCCAATAACGATACAGATTGTATCCAAGAAAACTTTACGGAATATTCGACGGACAAATATCATTCTCCTCAAGCAACGGCCAATGAAGTGGACGACGGCGCGGTTGCAGGCCCTTCTAACTTGTATGAACAATGTGATTCGCCTTCTCCTACTCCTACTCCTACGCCTGTTCAAAATCGAAGAAGCAAGAGAAAAACTACTTCAAACACAACACCGAAAAATAAAACAACACTTCCAACTAGACGAAAGAAAAATACGTCTACTACTCAAACTTCAGATCGGGTAAAAATTTTAGAGGCACCTGTATTCAAACCTACAGAAGAAGAATTCAAAGACCCGATAGCGTACTTACAAAAAGTCATGCCAGAAGCCGCTAAATTCGGTATATGCAAAATTGTTGCACCTCCGGGGTTTAAGCCGGAATGTAAGCTCGCAGATTCGATTCGTTTCACGGCAACCAATCAATATATTGGAAGATTATACAGTCGATGGGGTCCAGTAACGCGTGAAATATGTGCCTTGCGCTCATTTCTGCAATCACAAAATATAACGTTTACTCATGCGCCCTTAATGGAAGGCTTAGAAGTAAATTTACCGAAGCTGTTCAAATTCTTACAACGACAAGGCGGGCTCAAGGCGAAATTAAAAAGCCGCACATACTTAGATACGAGGAAGTGGGGCAGATTAGCGGAGGAACTCAGATATCCAAATGTAAACATTTCGGCAAAAAAACTGGATCAAATATACGTAAAATATTTGTTACCGTACGATGCTCTCACTCAAAAGGAACGTCAAGAACTTGCAGAGAAAATGGATAAGAGATGGTCGAAACGAAACGACAAATTATTACAACGAGCGCGAAATCCACTGCATCGCCAAAAGAGATTGCTAGGGGAGTCTGAATCATCAGACGAAGACGACAATGAAGAAAACCAACAAATAACCGCAACGCTCAACGATGCCGAAGAGTGTGTTATTCGTGGTCGATACATGAATCTAGTTAATTTTAGAAAGATAGCCAAGACCGCAGTCAAAATATTCTTCCCATCGAAAAAAAAGACCGCCGACATCGAATCGCAATACTGGAAGCTTGTGCTTCTCGGCAATGAGCATGTGTGCGTCAATACTGCGTCGATTGACACTGGAGCAGAAGGCCATGGATTCACCAAAAATAAAAATGAGCCTTACGGCAAACACCCATGGAATTTGAAGATGATGAGTCAGCATACTGACAATGTTCTCCGTTTGCTCGGTCCTGTACTAGGAGTTACAGTTCCCACACTCCAGTTTGGCATGATTTACTCGACAAGTTGCTGGCATCGGGACCCCCATGGGCTGCCATGGATGGAGTACATGCATACGGGACCGCCAAAGATATGGTATGGTATACCGGATACGGAGAGTACCAGATTTCGGCGCGCGGTGGAGTACCTTTGTCCAACTGCTTGTCAGAACAAATCCATATGGCTCCCATCAGACATAACAATGATCCCTCCACCCCTTCTGCTGGAGCAGAAAGTCTCGATGTCACGTGTAGTTCAGAAGCCAGGAGAATATATCGTAGTGCTCCCGAAAGCATATTCGAGCTCCATCTGTACAGGCTTTACTGTCTCGGAGAGTGTTTATTTCGCAACCAGTTCTTGGGTTAAAACTGTTAACCATGTTTTTCAAGAGCTGCGTGAAAGTTGTGAACCCACTATGTTCTCGCTGGAACAACTGCTGATCGCTTTAGCTCGTGACAAGGACGCCTCACTCACAATGCTGCAGCTGGTGCATGAAAACTTCTCCGCTATTCTCACCGAGGAGCTCGAGAACCGACGTCAGCTTGAAAAGCATGGACTTAAGGCTCGCCCGCTTCAACCCGAACGACAAAATACAGCGGGTGCGTGGAATGCAAACGATAATGAATGCGAAGTATGTCGCACAACGCTTTATCTATCCCGGGTGAGAGGTGTTTTTCGCAAAAAAAGCTCGGTCTGCCTACGTCACGCTTTGCAAGTCCTCGACAACAAGGATAAGAAAATTGAAAGACGCGAAGATTTTGAAATGGAATATTTCATCAAAACCACCGAATTAAAAGCATTGATCTCATCAGTCATACAACGGTTAACTACACCACTTCAACAACAAGAAGAATAA
Protein Sequence
MVSTNWKVQAQRKFAQGAFVPPSPNIINTLINRRVNTGTANESRYFFRHNTSARRLLDSISFEGIHTHKPIVVLERLENQQQFVQTEYQDDPNDDLLVPSTRSEPSNIVRSLPSRRKATNQSSTACLCSTSKGEKKKVQLKRKRVKRKYPVKTIRHKTNKKKKSDMNLRSSRQEPTVDTDFSIDDDKPLMYYTKRGTKRNGKNQENQQAASTTNKGVAQTTPVVKIEPLKENDGFSVPEVPVQFQVPTTRAGVRTGSVPKYRTPALWDCASHVSDSTNLSRAPSPKTTLNKKIRASASRTRALRIPYHYTILKDLPAYASHMDLPKSPPQNMGDASQLETVPQPLHESFDENEAQANVSSLYSSKGIANWMSNSQAAIAVPNNDTDCIQENFTEYSTDKYHSPQATANEVDDGAVAGPSNLYEQCDSPSPTPTPTPVQNRRSKRKTTSNTTPKNKTTLPTRRKKNTSTTQTSDRVKILEAPVFKPTEEEFKDPIAYLQKVMPEAAKFGICKIVAPPGFKPECKLADSIRFTATNQYIGRLYSRWGPVTREICALRSFLQSQNITFTHAPLMEGLEVNLPKLFKFLQRQGGLKAKLKSRTYLDTRKWGRLAEELRYPNVNISAKKLDQIYVKYLLPYDALTQKERQELAEKMDKRWSKRNDKLLQRARNPLHRQKRLLGESESSDEDDNEENQQITATLNDAEECVIRGRYMNLVNFRKIAKTAVKIFFPSKKKTADIESQYWKLVLLGNEHVCVNTASIDTGAEGHGFTKNKNEPYGKHPWNLKMMSQHTDNVLRLLGPVLGVTVPTLQFGMIYSTSCWHRDPHGLPWMEYMHTGPPKIWYGIPDTESTRFRRAVEYLCPTACQNKSIWLPSDITMIPPPLLLEQKVSMSRVVQKPGEYIVVLPKAYSSSICTGFTVSESVYFATSSWVKTVNHVFQELRESCEPTMFSLEQLLIALARDKDASLTMLQLVHENFSAILTEELENRRQLEKHGLKARPLQPERQNTAGAWNANDNECEVCRTTLYLSRVRGVFRKKSSVCLRHALQVLDNKDKKIERREDFEMEYFIKTTELKALISSVIQRLTTPLQQQEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-