Npol022955.1
Basic Information
- Insect
- Nymphalis polychloros
- Gene Symbol
- rcor2
- Assembly
- GCA_905220585.1
- Location
- HG992256.1:4440876-4446739[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.5e-10 1.4e-06 28.8 0.0 3 46 132 175 130 175 0.97 2 2 1.9e-11 2.9e-08 34.2 0.0 3 46 400 443 398 443 0.96
Sequence Information
- Coding Sequence
- ATGGTTTTGGCTGAAAGAAGTAATGATGTTCGAAACGGGAAGCGTTCGAGAGGGCCAAGCCCGAATGGTCACGGCAGCCCTGATTCTAGTTCTGAAGATGAAAACGTAGTGCCATTTGCAGCTGAAAAAATAAGAGTGGGGCGTGATTACCAGGCAGTGTGTCCTGAGTTGGAACCCTTGGAGCAAAGAAAACCTGATCAAATATCAGATAGAGCTTTACTAGTTTGGTCACCTACATCTGATATATCAGATATCAAATTGGATGAGTACATTACTACAGCAAAAGAAAAATATGGTTATAATGGTGAACAGGCACTTGGTATGTTGTTCTGGCATAAACATGATCTCAACCGGGCCTCCATGGACCTTGCTAATTTTACACCCTTTCCTGATGAATGGACAGTTGAGGACAAAGTGCTTTTTGAACAAGCTTTTCAGTTCCATGGTAAAAGTTTTCACAGAATAAGACAAATGTTGCCAGATAAATCGATCGCATCATTAGTAAAGTATTATTATTCATGGAAAAAGACAAGAGCTCGTACATCTTTAATGGACGTTGTGAGTGAAGGTCGTAATCCTACTGGCTCTGGAAGTGGAAAAAGAGAATCTGGGGCTGGATCCGAACCAGGTGGCTCAGATAAAGATTCTGATAATGATGAAAAGAGGTGGACTTTACATCGTGGTATAGTCCGCGGACGCAAGCCTTTGCCGGGTGGCGGGCCCTCGCTTCGCGGCGGCCAGCAAGGCGAGGGCGAGGGCGGCGGCGAAGCGGGCAAGTGGTGCACCGTTTGCGGCATTCAGTGCTCGCAGACCACGCCGCACAACTCGCACAAGTTGTGCCAGGCATGCCTCGTGCACGCCAGACGCACCGGCACGATGAGACCGCTGTGCGGGCCCTCGGGGCGTCGCGGGCCCGGCTCGAAACAGCAGCGGTACAAGCACCGCCTGCCGCGAGGCATTTACATCAATCACGACGATCTCGTGGCCATGGCCACCGGCCCGCAGCCCGGCGAGCCCGCGCAGCCCGGCCTTGTCAATCAGGGGGAGGCCATGCTCAAAGCCATGGACAGAGAGATTATCTCGCTCAAGAGACAAGTTCAACAAAACAAACAGCAGTTAAGTGCTATGAAACGCAAAGTAGGGGACGTTGGTGTAGAGGAGCTACGGCCCGGCGAACCGCCCGCAAAGATAAATTCGCGCTGGACTAATGACGAATTACTGATGGCAGTCACGGCTGTCAGAAAATATGGTAAAGATTTCCAAGCGATTGCTGAAACACTGGGCACTAAGACAGAAGCACACATCCGCACGTTCTTTATTTCCTATCGCCGTCGATATAATCTAGACGCAGTCCTGCGTGAGCACGAAGCCGACCGTGGAAGCGCTAAACACATACAAGCTGGTACAACAAGCACAGAATCAACTGAGAATGATGTGGATAACAGTAATTCCAACAATGGTACAGGTTCTCCACAAACCAATACAAAGGACGAGAAAACCGAGGTGGACAGCGAGGGCGTCGCCATCGGTGCGTCTGCCGAGCAAGGCGGGCCGCCCACCACGCCGCCCAAGCACAAGCCGAGCAAGTGA
- Protein Sequence
- MVLAERSNDVRNGKRSRGPSPNGHGSPDSSSEDENVVPFAAEKIRVGRDYQAVCPELEPLEQRKPDQISDRALLVWSPTSDISDIKLDEYITTAKEKYGYNGEQALGMLFWHKHDLNRASMDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRARTSLMDVVSEGRNPTGSGSGKRESGAGSEPGGSDKDSDNDEKRWTLHRGIVRGRKPLPGGGPSLRGGQQGEGEGGGEAGKWCTVCGIQCSQTTPHNSHKLCQACLVHARRTGTMRPLCGPSGRRGPGSKQQRYKHRLPRGIYINHDDLVAMATGPQPGEPAQPGLVNQGEAMLKAMDREIISLKRQVQQNKQQLSAMKRKVGDVGVEELRPGEPPAKINSRWTNDELLMAVTAVRKYGKDFQAIAETLGTKTEAHIRTFFISYRRRYNLDAVLREHEADRGSAKHIQAGTTSTESTENDVDNSNSNNGTGSPQTNTKDEKTEVDSEGVAIGASAEQGGPPTTPPKHKPSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00018116;
- 90% Identity
- iTF_00197313;
- 80% Identity
- -