Npol025590.1
Basic Information
- Insect
- Nymphalis polychloros
- Gene Symbol
- osa
- Assembly
- GCA_905220585.1
- Location
- HG992261.1:7708271-7715717[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-26 9.7e-23 80.9 0.0 2 89 235 319 234 319 0.94
Sequence Information
- Coding Sequence
- ATGCCACCGCGGCCATCGTCATCGTTATCGGACGGCGGCGGACCGACCGTAAGGGCCGGCGCTGGCGCAGGCAACCCGGGCGCAGGGCCGCCTCCGTCCGCAGCGCCTCCACCCGGAGCGATGCTGCCGCAGCCCTACCATCACGGACCCTACAAGCCGGCGCCCTATCCGCCGCAACCCTATGCCTACCCGCCACGCAACCACCACCCCTACCCGTATGGCGGGTACCGACCGACTCCACCGCCACATCCGTCACAACATTATCCGCCGCTCAAGCAAGCGGGTCGTCACATGGGCCCGCCGGGCGAGGCCATGCCGCCGCCCACCGCGCCGGGCGAGGCGCACGACAACGGGCCCGCCGCGCCCGCCACCGCGCTCGTCACCACCGGGCCCGACGGCGCGCCGCTCGACGAGGGCAGCCAGCAGAGCACGCTCAGCAACGCCTCCGCCGCGTCGGGCGAGGAGCAGTGCGGCACGCCCAAGAGCTCGCGCAAGGAGTACGGCGCGGGCAGCGCGGCGCCGTCGCCGTCGCCGGGCGGCGCGTCGCACTCGTCCGCGCACGACGACTACGACGCCTCGCCCTCGCCCTGGCCGCGCCCGCCCTCCAGTCCCGTGTTTAACAGTCACATAGCGCCGGAGTCCTACAGATCAAAGAAGTCGGACTCGCTGGGCAAGCTGTACGAGATGGACGACGCCCCGGAGCGGCGCGGCTGGGTGGAGCGCCTGCTGGCGTTCATGGAGGAGCGCCGGACGCCCATCGCCGCCTGCCCCACCATCTCCAAGCAGCCGCTCGACCTCTACCGCCTCTACCTGCTCGTGCGCGACCGCGGCGGGTTCGTCGAGGTGACGAAAAATAAAACGTGGAAGGACATCGCCGGCCTGCTCGGTATCGGAGCGTCGTCGTCGGCCGCGTACACGCTGCGGAAGCACTACACGAAGAACCTGCTCGCCTACGAGTGCCACTTCGACCGCGGCGGGATCGACCCGCAGCCGATCATCAACCAGGTCGAGGCCTCCACGAAGAAGAAGAGCGGCAAGTCCAACAGCACCACCAGTGCAGCAGGCTCGTCCAACTCAGCGGAGCAGTTCGTGGGCGGTGCGGGGCAGGGCGGCGCGCCCATGGACGGCTACCCCGCGCACTACGCGCCCTACCCGCCGCAGCCCGCGCAGCCGCAAGGCGGCGGGCCGGGCGGCGACAACCTCGCCGCCTCCAACCCGTTCGACGAGCCGCCGGGGCCGAGGCGACCCCCAGGTTACCAACAAGGTTACGGGTACGAATATGGATCTCCTTATCCGTCGAACAGGCCCGTCTACCCGCCGTACGGCCCCGACGGCGACAGGGGCTACGGGTCGGGCGGCGAGTACCGGTACGGCGGCTACGGCGGCGGGTACCGCGCGGGCGCGCCGGCGGGCGGTGCGGCGGCGGCGCAGCCCGCGCCCGCGCAGCCCGCCGCGCCGCCGCCCGCGCAGCCCGCGCACCCGGCGCACCCGGCGCACCCCGCGCACCCGGCGCAGCCCTACCCCGACTACTACCGCGCGCCGCACCCGCACCCGCACCCGCCGCACCCGCCGCACCCGCAGCACCCGCCGCATCCGCCGCACCCGCCGCACTCGCCGCAGCAGCCGCACGAGGTGTGTATCCTGTCTACCGCGCCGAGCGGCACACTCGAGGTCCATTACGAACTCCGACGGTCGCCGTTCTCCTAG
- Protein Sequence
- MPPRPSSSLSDGGGPTVRAGAGAGNPGAGPPPSAAPPPGAMLPQPYHHGPYKPAPYPPQPYAYPPRNHHPYPYGGYRPTPPPHPSQHYPPLKQAGRHMGPPGEAMPPPTAPGEAHDNGPAAPATALVTTGPDGAPLDEGSQQSTLSNASAASGEEQCGTPKSSRKEYGAGSAAPSPSPGGASHSSAHDDYDASPSPWPRPPSSPVFNSHIAPESYRSKKSDSLGKLYEMDDAPERRGWVERLLAFMEERRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKSGKSNSTTSAAGSSNSAEQFVGGAGQGGAPMDGYPAHYAPYPPQPAQPQGGGPGGDNLAASNPFDEPPGPRRPPGYQQGYGYEYGSPYPSNRPVYPPYGPDGDRGYGSGGEYRYGGYGGGYRAGAPAGGAAAAQPAPAQPAAPPPAQPAHPAHPAHPAHPAQPYPDYYRAPHPHPHPPHPPHPQHPPHPPHPPHSPQQPHEVCILSTAPSGTLEVHYELRRSPFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00642124;
- 90% Identity
- iTF_01506948; iTF_00796304;
- 80% Identity
- -