Basic Information

Insect: Nymphalis io
Gene Symbol: ttk
Assembly: GCA_905147045.1
Location: LR989901.1:10020550-10075723[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.27 25 6.1 0.0 2 23 494 516 494 516 0.90

2 6 0.00028 0.026 15.5 0.9 1 23 527 550 527 550 0.94

3 6 0.00031 0.028 15.4 2.7 1 23 560 582 560 582 0.97

4 6 3.5e-06 0.00032 21.5 2.1 1 23 735 757 735 757 0.97

5 6 4.4e-06 0.0004 21.2 0.2 1 23 763 785 763 785 0.98

6 6 2.7e-05 0.0025 18.7 3.3 1 23 791 813 791 813 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.27	25	6.1	0.0	2	23	494	516	494	516	0.90
2	6	0.00028	0.026	15.5	0.9	1	23	527	550	527	550	0.94
3	6	0.00031	0.028	15.4	2.7	1	23	560	582	560	582	0.97
4	6	3.5e-06	0.00032	21.5	2.1	1	23	735	757	735	757	0.97
5	6	4.4e-06	0.0004	21.2	0.2	1	23	763	785	763	785	0.98
6	6	2.7e-05	0.0025	18.7	3.3	1	23	791	813	791	813	0.98

Sequence Information

Coding Sequence: ATGGGAAGTGAGCACTATTGCCTGAGGTGGAACAATCATCAGAGCAACTTGCTCGGCGTTTTCAGCCAACTGCTACACGACGAAAGCTTGGTGGACGTCACGCTCGCCTGTTCCGAAGGTGCCTCCATCCGGGCTCATAAGGTAGTACTATCAGCGTGCTCATCTTACTTCCGTTCGCTATTTGTGGACCATCCTTCACGTCACCCAATCGTGATCCTCAAGGACGTGGGCTTGGAGGAGCTCCGAACGCTCGTAGACTTCATGTACAAGGGCGAGGTTAACGTCCAATATTGCCAACTGCCTGCTCTCCTTAAAACTGCTGAGAGCCTACAGGTCAAAGGACTAGCTGAAATGACTACACTCAGCGCAGCCGGCATTGACACGAGGAACGTTCCGGAACCGATGGAGGAGTGCCAACAACAAGATATAAGGGAATGTACGGAATCGCATGAAAGGTTAGACGAGCGAGATATACGCGAGAAAGAAGAACGGAGGGAAGCAAAGGAAAGCCGTGAAATCCGTGAACGGGATTGCAAAGATATAAGAGAATGTCATAGAGAATCTCGAGAGTCGAGAGATTTGGGTGGGCATAGAGAAAGAGACAGGGAACGTGAAAGGGAACCGCGGGACGTGGTACGGGAAACTCGAGAGTCGAGAGATTTGGGTGGGCATAGAGAAAGAGACAGGGAACGTGAAAGGGAACCACGGGACGTGGTACGGGACCACAGAGAATTACGAGATGTTAAAGATAATAGAGAGAGAGAGAGAGAATTACGTGAAATAAGGGACGCGAGAGATCTTCGTGATGCTCGCGATCAACGGGAAGCCGTTGAAGCTTCTCCACCAAGAATATCTCCGTTACTTTCTGTGAGACGGTTTAGGCCTGAAACGTCAATTGAAATTCCAACATTAACGCATCCACCTATACCAAAAGACGAACCACCTGACGAACCAATGCGTCCATCGTCACCCGAAGAAGACTCCGTTTCAATTAGGTCCAATGGTGCGAATGAGAACGTGGGCATAAATATGATAATAAACAGTCATGGTGGCCTGGGACCGCGCTACTCTCCTGTAGAACAAAGGCTTAGTGTGCTGAACACATTACCACATCCTGGATTGCCTCATCCCTCTCATAGTTCACTATCGAGTCCAAGAAATGAACCTATAGCAGGACCCTCCGGGTTGCCTCCTGTTCAACAAGTACCTTTGTCTTTGAAGAAAGAAGCAGATTGGGATAGGAGTAATGAGGAAAAGATTGTGGAAGCAGCACCAGAGTTCCGGATGCAGCATGAATCTATGTGCTTGGACATGACATGTGGGTCTCCGAGTATTGCAAGTCCCATACCTCCCAGTAGCCCAACAGCTCTGCCCCTGTGGTCGCCACTTCTTGCCCTGCAAGCTTGCCGTCTCCGCAGGTACCTTAGCGATGATTGTATGGCATACCAGAGCCGTCATTTACTTCATTCTGAAAGGCGTCGATGTGGCGTCTGCCTTGCTTCCTTTCCCTCGACTTGGCTTTTAGAACGCCACGCTGCTCTTCAGCACGCGTCGCAGTCTTCTACCGATGATAAACCTTTCGTGTGCGAACAATGCGGACAGAGCTACCGCTATAGATCCGCTTACGTAAAGCATAGAGAACAAAACCACCGTGCAAGATTACCAGCCGATAAATTATTTACTTGCGACGTTTGCGGCATGCAGTTTCGATATCTTAAATCGTTTAAAAAACATCGCCTCAATCATACTTTGGAAAGACTTCATACTAAAAACACCGACCAACCGGAGGGTATCGACCAAGTCACTAGCACTAATGAAGTTTTAATTGGTCAGTGTGGGGAAATGGATTTGTCCATGAAGAAAAAGAATAGAACTGACGTCATCAGAACGCCACCTATCGATGTCACTGTTGATGGCGAACAAGATAGTACCGTAGATTCGAACGGGCCTACTGATTCTATTGTAACCGTCGATGATTCCAATGACTGCAGAAACTCGAGCGCAGACAGCGAAACCAAAAGGGACGAGTCCCTCACAAATGAAAGAAGACGGGTTCCAGTATCTTTCGCAAGCGTGAGCTCTATGGCAGACAGCTCCGAGAGCGAGTCACGTGGTGACAATAAACTCGAAAATTCTAGTTCACATTCCGGCATTCTGGGATTTCTGCAAAATGATGATAGGCAGAGAGACAGAGAAAGAAGATTCGCTTGTCCGTTCTGTGGTAAATGTGTAAGATCGAAGGAGAATTTAAAGCTACACGTGAGGAAGCACACCGGAGAGCGTCCGTTCGTGTGTTTGTTCTGCGGCAGAGCATTCGGCGGGAAGAGCGATCTGACGCGTCACCTGCGCATTCACACGGGCGAGCGGCCCTACCACTGCGAGGCGTGCGGGAAGTGCTTCGCGCGGGCCGACTATCTGTCCAAGCACCTGACCACGCACGTTCACAACGCACGCTGA
Protein Sequence: MGSEHYCLRWNNHQSNLLGVFSQLLHDESLVDVTLACSEGASIRAHKVVLSACSSYFRSLFVDHPSRHPIVILKDVGLEELRTLVDFMYKGEVNVQYCQLPALLKTAESLQVKGLAEMTTLSAAGIDTRNVPEPMEECQQQDIRECTESHERLDERDIREKEERREAKESREIRERDCKDIRECHRESRESRDLGGHRERDREREREPRDVVRETRESRDLGGHRERDREREREPRDVVRDHRELRDVKDNRERERELREIRDARDLRDARDQREAVEASPPRISPLLSVRRFRPETSIEIPTLTHPPIPKDEPPDEPMRPSSPEEDSVSIRSNGANENVGINMIINSHGGLGPRYSPVEQRLSVLNTLPHPGLPHPSHSSLSSPRNEPIAGPSGLPPVQQVPLSLKKEADWDRSNEEKIVEAAPEFRMQHESMCLDMTCGSPSIASPIPPSSPTALPLWSPLLALQACRLRRYLSDDCMAYQSRHLLHSERRRCGVCLASFPSTWLLERHAALQHASQSSTDDKPFVCEQCGQSYRYRSAYVKHREQNHRARLPADKLFTCDVCGMQFRYLKSFKKHRLNHTLERLHTKNTDQPEGIDQVTSTNEVLIGQCGEMDLSMKKKNRTDVIRTPPIDVTVDGEQDSTVDSNGPTDSIVTVDDSNDCRNSSADSETKRDESLTNERRRVPVSFASVSSMADSSESESRGDNKLENSSSHSGILGFLQNDDRQRDRERRFACPFCGKCVRSKENLKLHVRKHTGERPFVCLFCGRAFGGKSDLTRHLRIHTGERPYHCEACGKCFARADYLSKHLTTHVHNAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00943167;
90% Identity: iTF_01507347;
80% Identity: iTF_01079177;