Nio012781.1
Basic Information
- Insect
- Nymphalis io
- Gene Symbol
- JARID2
- Assembly
- GCA_905147045.1
- Location
- LR989895.1:8789447-8816274[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-16 1e-12 48.8 0.0 7 89 674 759 670 759 0.87
Sequence Information
- Coding Sequence
- ATGAAACCGAAAGTTCAGGCCCAACGCAAGTTTGCTCAGGGAGCTTTTGTGCCACCAAGTCCAAACATTGTTAATACTCTTATAAACAGAAGGGTAAATACAGGCACCGCTAATCAATCGCGTTATTTTTTTCGTCACAACACTTCTGCAAGGCGTCTGTTAGACTCAATTTCATTTGAAGGTATACATACACATAAACCGATTGTTGTATTGGAAAGATTAGAGAACCAACAACAATTTTTACAAACTGAACATCAACATGATCCTAACAATGACCTATTGGTGCCAATACGTTCTGAACCGTCAAATATCGTAAGAAGATTACCTTCGCGGAGAAAAGCTACAAATCAAAGTTCTACTGCATGCTTGTGCTCGACTTCAAAAGGTGAAAAGAAAAAAGTTCAATCAAAAAGGAGTCGTGTAAAAAGAAAATATCCTGTCAAAAGGATCAGACGTAAAACAAATAAGAAAAAAAAATCTGATATGAATTTGAGATCATCCCGACAAGCTTCTACCGCCGATACAGATTTTTCCATAGATGATGATAAGCCATTGATGTACTATACCAAAAGAGGAACAAAACGAAACAGCAAAAATCAAGAAAACCAACAGGCTACGTCGACAACCAATACAGAAATCTCACAAAGTTTGCCGGCTGCGTCTGCGTCTCCAAATGTTGGAAGTGTTTCTCAATCGACGCCGGTTGTGCAGATGGAAACTACAAAAGAAAATGATGGCTTCTCCGTACCGGTACCGCCAGTTCAATTTCAAGTTCCTACTATGAGAGCTGGTGTCTCTCAATCGGGCCGACCGCGACCCAACACTACGAGGACTGGCGTCCGATCTGGATCGATAACTAAATATCGAACTTCAACTTTATGGGCTGGTACCTATGAGACGGTACCATCGTGGCTAGCCCACAATAGGAGAGATATGGGCGGAAGAAAGCAGCTTTGTAAACGGTTTAGACGATTCCGCACTGGGTCAGGTGCTCATTTGCGAGTTATAGTTAACGAAAACCAGGACAAATGCACTTTAGTCAGGTCTTATTCACCGACTAGTTCATATTGTGCCTCTCACGTCTCGGAATCGACGAATAAGTCAAGAGCTACGTCTCCGATGACTAATGCTAATGCTTCTTGCATAAACTTGCCGAAATCACCACCTCAGAATATGGAAATCCCTGAAACGACTGTACCTCGTATAGTGGAAACTTTTTCATTGGACGACACATACCGCAATTCCACGGATCTACAAACGTTGGTCAACGAATTAGCTGATACATCTCAGTTGGAGACGGTACCTCAACCACTCCATGAGATTTTGGATATACCTAAATATTCTGATCTGGATGAGTCTTACTCGAGGAGTGGTGCATATGAGAATGAGGCTCCAGCAAACGCTTTTTCGCTTTATAGTAGTAAAGGAATCAAAAACTGGATGAGTAAGTCGGAAGCTGCAATTGCAATTCCTAATAACGATACAGATAGTATACAAGAAAACTGTACAGAATATTCGACGCACCAATATCATTCTCTTCAAGCAACGGCCAATGAAGTGGACGACGGCGCGGTTGCAGGTCCTTCTACCTTGTATGAACAATATGATTCGCCTTCTCCTACTCGCACTCCTACACCTACGCCTACTCCTACGCCTACTCCTACTCCTACTCCTGTTCAAAATCGAAGGAGCCAGAGAAAAACTACTTCAAACACTACACCGAAAAATAAAACAACACGTACAACTAGACAAAAGAAAAATATGAATACTACTCAAACCTCAGATCGGGCAAAAATTTTAGAGGCACCTGTATTTAAACCGACAGAAGAAGAATTTAAAGACCCAATAGCGTATTTACAAAAAGTGATGCCAGAAGCCGCTAAATTCGGTATATGCAAAATTGTTGCACCTCCGGGGTTTAAGCCGGAGTGTAAGCTCGATGATTCAATTCGTTTCACTGCAACGAATCAATATATTGGAAGATTATACAGTCGATGGGGTCCGGTAACACGTGAAATATGTGCCTTGCGCTCATTTTTGCAATCACAAAATATACCGTTTATTCATGCGCCCTTAATGGAAGGCTTAGAAGTTAATTTACCGAAGCTGTTTCAATTTTTACAACGACAAGGCGGGCTCAAGGCGAAATTAAAAAGCCGCACATATTTAGATACGAGGAAGTGGGGGAGATTAGCGGAGGAACTCAGATATCCAAATATAAACGCTTCGGCAAAAAAACTAGATCAAATATATGTAAAATATTTGTTACCGTACGACGCTCTCACTCAAAAGGAACGTCAAGAACTTGCGGAGAAAATGGATAAGAGATGGTCAAAACGAAATGACAAATTGTTACAACGAGCGCGAAATCCACTACATCGCCAAAAGAGATTGTTAGGGGAGTCTGAATCGTCAGATGAAGACGATAATGAAGAAACCCAACAAATAACTGCAACGCTCAATGACGCGGAAGAGTGTGTTATTCGTGGTCGACTTATGAATCTAGTTAACTTTAGAAAGATAGCCAAGACCGCAGTCAAAATATTCTTCCCATCGAAAAAAAAGACCGCCGATATCGAGTCGCAATACTGGAAGCTTGTGCTTCTCGGCAATGAGCACGTGTGCGTCAATACTGCGTCGATTGACACTGGAACAGATGGCCATGGATTTACCAATAATAAAAATGAGCCTTACGGCAAACATCCATGGAATTTAAAGATGATGAGTCAGCATCATGACAATGTTCTCCGTTTGCTCGGTCCCGTACTAGGAGTTACACTTCCCACCCTTCAGTTCGGCATGATTTACTCAACAAGTTGCTGGCATCGAGACCCCCATGGTCTGCCTTGGATGGAGTACATGCATATGGGACCTCCAAAGATATGGTATGGTATACCGGATACGGAGAGTACCAGATTTCGGCGCGCGGTGGAAAACCTTTGTCCGACTGCTTGTCAGAACAAATCAATATGGCTCCCATCAGATATAACAATGATCCCTCCACCCCTTTTGCTGGAGCGGAAAGTCTCGATGGCACGTGTAGTTCAAAAACCGGGAGAATATATCGTGGTGCTCCCGAAAGCATATTCGAGCTCCATCTGTACAGGCTTTACTGTCTCGGAGAGTGTTTATTTCGCGACCAGTTATTGGGTTAAAACTGTTAACCATGTTTTTCAAGAGTTGCGTGAAAGTTGTGAACCCACTATGTTCTCGCTGGAACAACTGCTGATCGCTTTAGCTCGCGACAAGGACGCCTCACTCACAATGCTGCAACTGGTGCATGAAAACTTCTCCGCTATTCTCACCGAGGAGCTCGAGAATCGACGTCAGCTTGAAAAGCACGGACTTAGGGCTCGCCCGCTTCAACCCGAACGACAAAATACACCGGGTGCCTGGAATGCAAATGATAATGAATGCGAAGTATGTCGCACAACACTATATCTATCCCGGGTGAGAGGTGTTTTTCGCAAAAAAAGCTCGGTCTGCCTACGTCACGCTTTGCAAGTCCTCGACAGCAAGGATAAAAAAATTGAAAGGCGTGAGACTGAAGAGTTTGAAATGGAATATTTCATCAAAACCACCGAATTAAAAGCTTTGATCTCATCAGTCATACAAAGGTTAACTTTACCACTTCAACAACAACGACAACAACAAGAAGAATAA
- Protein Sequence
- MKPKVQAQRKFAQGAFVPPSPNIVNTLINRRVNTGTANQSRYFFRHNTSARRLLDSISFEGIHTHKPIVVLERLENQQQFLQTEHQHDPNNDLLVPIRSEPSNIVRRLPSRRKATNQSSTACLCSTSKGEKKKVQSKRSRVKRKYPVKRIRRKTNKKKKSDMNLRSSRQASTADTDFSIDDDKPLMYYTKRGTKRNSKNQENQQATSTTNTEISQSLPAASASPNVGSVSQSTPVVQMETTKENDGFSVPVPPVQFQVPTMRAGVSQSGRPRPNTTRTGVRSGSITKYRTSTLWAGTYETVPSWLAHNRRDMGGRKQLCKRFRRFRTGSGAHLRVIVNENQDKCTLVRSYSPTSSYCASHVSESTNKSRATSPMTNANASCINLPKSPPQNMEIPETTVPRIVETFSLDDTYRNSTDLQTLVNELADTSQLETVPQPLHEILDIPKYSDLDESYSRSGAYENEAPANAFSLYSSKGIKNWMSKSEAAIAIPNNDTDSIQENCTEYSTHQYHSLQATANEVDDGAVAGPSTLYEQYDSPSPTRTPTPTPTPTPTPTPTPVQNRRSQRKTTSNTTPKNKTTRTTRQKKNMNTTQTSDRAKILEAPVFKPTEEEFKDPIAYLQKVMPEAAKFGICKIVAPPGFKPECKLDDSIRFTATNQYIGRLYSRWGPVTREICALRSFLQSQNIPFIHAPLMEGLEVNLPKLFQFLQRQGGLKAKLKSRTYLDTRKWGRLAEELRYPNINASAKKLDQIYVKYLLPYDALTQKERQELAEKMDKRWSKRNDKLLQRARNPLHRQKRLLGESESSDEDDNEETQQITATLNDAEECVIRGRLMNLVNFRKIAKTAVKIFFPSKKKTADIESQYWKLVLLGNEHVCVNTASIDTGTDGHGFTNNKNEPYGKHPWNLKMMSQHHDNVLRLLGPVLGVTLPTLQFGMIYSTSCWHRDPHGLPWMEYMHMGPPKIWYGIPDTESTRFRRAVENLCPTACQNKSIWLPSDITMIPPPLLLERKVSMARVVQKPGEYIVVLPKAYSSSICTGFTVSESVYFATSYWVKTVNHVFQELRESCEPTMFSLEQLLIALARDKDASLTMLQLVHENFSAILTEELENRRQLEKHGLRARPLQPERQNTPGAWNANDNECEVCRTTLYLSRVRGVFRKKSSVCLRHALQVLDSKDKKIERRETEEFEMEYFIKTTELKALISSVIQRLTLPLQQQRQQQEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -