Nio008103.1
Basic Information
- Insect
- Nymphalis io
- Gene Symbol
- retn
- Assembly
- GCA_905147045.1
- Location
- LR989912.1:7988773-7994177[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-17 9.7e-14 52.0 0.1 29 89 4 62 1 62 0.93 2 2 0.8 2.9e+03 -0.8 0.0 22 41 99 118 91 120 0.81
Sequence Information
- Coding Sequence
- ATGGCGAAGTCTGTTCTCGATCTCTTCGAGCTGTACAATCTGGTGATAGAACGTGGCGGTCTCGTGGAGGTGATCAACAAGAAGCTTTGGCAAGAAATCATCAAGGGGTTGCGACTGCCTTCGTCTATCACCTCGGCCGCTTTCACTTTACGTACACAATACATGAAGTATTTGTACGACTATGAGTGTGAAAAGAACAACCTTTCAACTAGAAGTGAGTTGGACGCTGCTATTGAGGGGAACAAGCGCGAGGGGCGGCGTTCTTCCGGACAGTACGAGGCGCAGGCAGCATTGGCATTGCCGCAGCTCAGCAGAACTCCGGTGTCTCTCACTCAGTTAACCCAGCACATGCAGCCTTTGACCCTCTCGCTCAATGGAGCAGTCGCCGGGGTACCACGCCTACCTTCGTTTACACCACACGGACCTCAACTATCTCAACAAGATATAGAGTACCGCGTTCGCGAGTATATGAATATGATACATCAACAGCGTGAACTTATTAGAAATGGGTCAGAATCTCCTCCTAACCCTCCGATGGTATCGCCTCGCGATGCCGCTTTCTCTGCCTTTGACATGTCGCGATTCACACTGTGGTCATTATATAACAACAACATCAATCGCCGCAGCCCACCGCCTGAAACCGAATCCGAACCCGATTCCGAACCGCAACGCGAGGCTCTTAACCTAAGCGAGAGTTCCAACTCAAGTGTCGCTGGCATGAAGCGCGAGGGCTGCCCCTCCTCTCCCCCGCCAGCAAAGCGCCGCTCACCGAACCCGCGATCCCCCACGCCCTCCACTTCCACTTCCCCGCAGCTCACTCCGCCGCAGCTCACTCCGCCGCGTTCACTCGCACAACTCACTGGAAACCGCAATGGGGTACGCGGAGCCGTTTTTAAGATCACCACTCGAGGCGATTCTGCAACTGGCGATCAACAGCTGGTTGTATCTATCGAACTAAACGGGGTGACATACGAAGGCGTTCTGTTCCCAGTACAGAACGGCAACGGTCAAAACGGCCATCGCCAAATGGTCTCTTAA
- Protein Sequence
- MAKSVLDLFELYNLVIERGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKNNLSTRSELDAAIEGNKREGRRSSGQYEAQAALALPQLSRTPVSLTQLTQHMQPLTLSLNGAVAGVPRLPSFTPHGPQLSQQDIEYRVREYMNMIHQQRELIRNGSESPPNPPMVSPRDAAFSAFDMSRFTLWSLYNNNINRRSPPPETESEPDSEPQREALNLSESSNSSVAGMKREGCPSSPPPAKRRSPNPRSPTPSTSTSPQLTPPQLTPPRSLAQLTGNRNGVRGAVFKITTRGDSATGDQQLVVSIELNGVTYEGVLFPVQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -