Basic Information

Insect: Nymphalis c-album
Gene Symbol: zfh1
Assembly: GCA_905332345.1
Location: CAJOBY010000052.1:119182-127409[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.033 2.5 9.2 0.2 1 23 74 96 74 96 0.94

2 8 2.4e-05 0.0018 19.0 2.4 2 23 102 123 101 123 0.97

3 8 1.1e-06 8.6e-05 23.2 6.1 1 23 132 154 132 154 0.99

4 8 0.00012 0.009 16.9 1.0 1 21 160 180 160 181 0.95

5 8 0.016 1.2 10.2 0.4 2 21 441 460 440 461 0.91

6 8 8.9e-06 0.00068 20.4 1.1 1 23 762 784 762 784 0.94

7 8 7.4e-05 0.0056 17.5 7.6 1 23 790 812 790 812 0.98

8 8 0.062 4.8 8.3 7.1 1 21 818 838 818 839 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.033	2.5	9.2	0.2	1	23	74	96	74	96	0.94
2	8	2.4e-05	0.0018	19.0	2.4	2	23	102	123	101	123	0.97
3	8	1.1e-06	8.6e-05	23.2	6.1	1	23	132	154	132	154	0.99
4	8	0.00012	0.009	16.9	1.0	1	21	160	180	160	181	0.95
5	8	0.016	1.2	10.2	0.4	2	21	441	460	440	461	0.91
6	8	8.9e-06	0.00068	20.4	1.1	1	23	762	784	762	784	0.94
7	8	7.4e-05	0.0056	17.5	7.6	1	23	790	812	790	812	0.98
8	8	0.062	4.8	8.3	7.1	1	21	818	838	818	839	0.96

Sequence Information

Coding Sequence: ATGAAAGTGCAGAGCTCGCTTATGGGAGTTGGCGGTTGGTACGAATGCTTGGCGGCCGGTTGGCTTGCCGACATGAGGAGTAAGCAGGTCCCCAGGTCTACCGCCTCGGCCAGGCGGCTCGCGGCTTTAATCCGGCCGCTTGCCGGTGGAGGCGCGGAGGGCAAACCTTCGGAAGAGGAGGAGGAGCGTGGGGGCTCACCACTGGGCCCCGGCGGGCCCTTCGCCTGCAGCCAGTGCCGCGGCGCCTACCCAACACGAGAGCAGCTCGAGCGACACGAGACCCTGCATACGCCCAGCACTCAGTCGTGCAAGATTTGCCACAAGAGCTTCGCGAACGTGTACCGACTGCAGCGCCACATGATCAGCCACGATGAAAGCGCTGACCTTCGTAAATATAAGTGCAACGATTGTGACAAGGCGTTCAAATTTAAACACCATCTCAAAGAGCACCTTCGGATACACAGTGGTGAGAAACCATTCGAATGTGCCAACTGTGGTAAAAAGTTTTCCCACTCCGGCTCCTATTCGTCACACATGACGTCTAAAAAATGTCTTGTGATGAACCTCAAGATGGGTCGAATAAAGCCTAATAACCCTGCTCTTAACCCTGATCGAACTCCTTCGCGCAAACGAACAAATGCGATGGTTGCATCGCAACTGAATAATAACATTGCAACGAATGGTAGTTCTTATTTACCAATTCTTCCTAAATACAATGACGCTGCATTCTTTGCATCGATGTCAACGCCAGAAAATAATTTCCACCGACCAGGCCAGCCAGGGATTAACCCCTTCTACATGCCTCCCGGTATGCTTTTGAGTCCTGCTAATGGAATTGCTCCATACAGTTTCCCGACTTCTTTAAGTCAGCTTTTTGAGCAACTAGCATCACAGCAATACCACCAAAGAAAAATAGAAAATCCTAGTCCGAAACAAATGGGTCCCCCTTCAGCTGATCCAGAAGATTTAATAGAAGAAGTGATCGAAGACGAAGACAAAAGATCAGAAGGTAGCGCCGAGCTTGTAATGGACATAGAGGATGAAGATAATATTACCATAAAAAAGGAACAAGAAGAACGAGAGAGCGAGCAAAGGTCTCCCTCGCATGCTTATGAATCCGTCCCTGTGAACAATAACAGTGAAGAGGCTGACAACAATCAGACAGGTTTTAACACTATCATTAATTCCGTTAATGCTTctgtaacaaaacatttttttagagCTGATATGGAAAAACTATCACCAGTTTCCGGAAACATATACCCTAGCATAGAATCACCAGTGCCACGTATTACCGTGAAAGAGGAACCTGATGAGTTGCATTGCTTAAAATGCAACGTTAGGTTTACTGACAAAAATGAACTGATAGAACATGAAAAGGTTTTATGTGGAAATATGTTCAGAAAACACGAAGGATTAGCTGCTCAAATGGCTGAAACAGTGGCACTAAATAGGTTAGAGGCTGAAATGCGAGCTTCTATCCAGAGCGGAGTCAGTGCAAGTGAAGATGAGGACTTTGGCAAAGATGACAAAGATGATAAAGTATCTCTACATGACAGCGATAGAAAGATTAGAGTTCGCACAGCCTTAAGTGAAGAACAACAAACTGTACTAAAGAAACATTACTCTGTTAATCCTCGGCCAAATAGAGACGAATTCAAAAAGATAGCTCATCAAATTGGTCTAGATAACAGAGTCGTACAAGTGTGGTTCCAAAACAATAGGGCGAGGGTGAGACGAATGACTCAAGCGATAGCTATTTCGGACCAACCACTAGATCTGTCAACAAAGAAATGTAACGCATCGTTAACATCTAGTCCGTCGCCTTCTCCGCCTTGCAGCATTTCAGTTACACATTCCGACTCTGAAGAAGCAGTTAATTTGAGCCAAAAATCTTCGCGTAGTACGACTCCACATCGTTCTAATTATCTTAACACGTATCCACATTCCAATTGTTCTTCTTCATCGTTTACTGATTTTCGATTGTCACCATCACCGGGTGAAACGATCAGCGCGCAGAAGAGGTTATTGTCTCAAAAGGTGCCACTTAATCCTATGATGCCAATGGATAAACTTCTTCAATATAACGATTTGACAAATGGCAGATCGCCAATACTTAACATGCATATATCGTCAGAGCATAGACAAGAGTCTAGCCCATCTTACGATCGACCATCTTGGGGAGATGAAATGCAAGCTCAAAATGAATTTGAAGATGAAACGTCAGTACTTAAGAAAAGCAAGCTAAAGGCTAGCAACGACTTTAAAGAGGGAGAGGGACAATTCGTCTGCGACCAATGTGATAAAACTTTTGTGAAACAGAGCTCTCTCGCGAGACACAAATATGAGCATTCAGGTCAACGTCCGTACAAATGTTTGGAGTGCCCAAAGGCGTTCAAGCATAAGCACCACCTCACAGAACACAAGCGGCTCCACACCGGCGAGAAGCCGTTCCAGTGCTGCAAGTGCCTCAAGAAGTTCTCCCACTCCGGCTCCTACAGTCAACACATGAACCACAGGTTTGCCATCTGCAAACCCTACAGGGACTAA
Protein Sequence: MKVQSSLMGVGGWYECLAAGWLADMRSKQVPRSTASARRLAALIRPLAGGGAEGKPSEEEEERGGSPLGPGGPFACSQCRGAYPTREQLERHETLHTPSTQSCKICHKSFANVYRLQRHMISHDESADLRKYKCNDCDKAFKFKHHLKEHLRIHSGEKPFECANCGKKFSHSGSYSSHMTSKKCLVMNLKMGRIKPNNPALNPDRTPSRKRTNAMVASQLNNNIATNGSSYLPILPKYNDAAFFASMSTPENNFHRPGQPGINPFYMPPGMLLSPANGIAPYSFPTSLSQLFEQLASQQYHQRKIENPSPKQMGPPSADPEDLIEEVIEDEDKRSEGSAELVMDIEDEDNITIKKEQEERESEQRSPSHAYESVPVNNNSEEADNNQTGFNTIINSVNASVTKHFFRADMEKLSPVSGNIYPSIESPVPRITVKEEPDELHCLKCNVRFTDKNELIEHEKVLCGNMFRKHEGLAAQMAETVALNRLEAEMRASIQSGVSASEDEDFGKDDKDDKVSLHDSDRKIRVRTALSEEQQTVLKKHYSVNPRPNRDEFKKIAHQIGLDNRVVQVWFQNNRARVRRMTQAIAISDQPLDLSTKKCNASLTSSPSPSPPCSISVTHSDSEEAVNLSQKSSRSTTPHRSNYLNTYPHSNCSSSSFTDFRLSPSPGETISAQKRLLSQKVPLNPMMPMDKLLQYNDLTNGRSPILNMHISSEHRQESSPSYDRPSWGDEMQAQNEFEDETSVLKKSKLKASNDFKEGEGQFVCDQCDKTFVKQSSLARHKYEHSGQRPYKCLECPKAFKHKHHLTEHKRLHTGEKPFQCCKCLKKFSHSGSYSQHMNHRFAICKPYRD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00213884;
90% Identity: iTF_01508332;
80% Identity: iTF_01078090;