Basic Information

Insect: Nymphalis c-album
Gene Symbol: -
Assembly: GCA_905332345.1
Location: CAJOBY010000006.1:10738101-10745749[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 5.8 4.4e+02 2.1 0.3 2 23 6 27 5 27 0.94

2 14 0.0017 0.13 13.3 0.1 1 23 1000 1023 1000 1023 0.92

3 14 7.9 6e+02 1.7 0.2 1 23 1101 1123 1101 1123 0.87

4 14 0.00025 0.019 15.8 1.9 2 23 1126 1147 1125 1147 0.97

5 14 0.00029 0.022 15.6 2.6 1 23 1153 1175 1153 1175 0.98

6 14 0.0042 0.32 12.0 2.5 2 23 1182 1203 1181 1204 0.95

7 14 0.52 40 5.4 1.9 5 23 1217 1235 1215 1235 0.97

8 14 0.018 1.4 10.0 1.1 3 23 1242 1263 1241 1263 0.96

9 14 0.0093 0.71 10.9 0.1 2 23 1288 1308 1287 1308 0.96

10 14 0.0037 0.28 12.2 1.8 1 20 1314 1333 1314 1336 0.88

11 14 0.00031 0.023 15.6 0.5 1 23 1344 1366 1344 1366 0.98

12 14 0.0054 0.41 11.7 7.2 1 23 1372 1394 1372 1394 0.98

13 14 8.6e-06 0.00065 20.5 1.4 1 23 1400 1424 1400 1424 0.97

14 14 0.001 0.079 13.9 4.2 1 23 1430 1452 1430 1453 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	5.8	4.4e+02	2.1	0.3	2	23	6	27	5	27	0.94
2	14	0.0017	0.13	13.3	0.1	1	23	1000	1023	1000	1023	0.92
3	14	7.9	6e+02	1.7	0.2	1	23	1101	1123	1101	1123	0.87
4	14	0.00025	0.019	15.8	1.9	2	23	1126	1147	1125	1147	0.97
5	14	0.00029	0.022	15.6	2.6	1	23	1153	1175	1153	1175	0.98
6	14	0.0042	0.32	12.0	2.5	2	23	1182	1203	1181	1204	0.95
7	14	0.52	40	5.4	1.9	5	23	1217	1235	1215	1235	0.97
8	14	0.018	1.4	10.0	1.1	3	23	1242	1263	1241	1263	0.96
9	14	0.0093	0.71	10.9	0.1	2	23	1288	1308	1287	1308	0.96
10	14	0.0037	0.28	12.2	1.8	1	20	1314	1333	1314	1336	0.88
11	14	0.00031	0.023	15.6	0.5	1	23	1344	1366	1344	1366	0.98
12	14	0.0054	0.41	11.7	7.2	1	23	1372	1394	1372	1394	0.98
13	14	8.6e-06	0.00065	20.5	1.4	1	23	1400	1424	1400	1424	0.97
14	14	0.001	0.079	13.9	4.2	1	23	1430	1452	1430	1453	0.95

Sequence Information

Coding Sequence: atGGATCAAAGAGTGCAATGCCCTGTGTGTACACTGTACCTGCACAGTGGAATGACCTTAGAGTCACATTTGGATACACATCCAAAAGATCAAGTAATAAGAGCATTATGTAGTTTATCAGCAAAAACTGTTAATTTTGGAAGCAGAACACCTACTCCATTAAACTCGGAGAGGTCATTTAGAAGTAGGTCAAGAACGCCAGCAACTGACGACAGTGGAAGATGGGCCAACTCTCATCGAAATAGTGATAATGAAAGGTACTGGAGAAGGACCCCAAGTAGAACTAAGTCAACTCCACTCTCAACATCAGTCTCAAGAAATCCAACACCAGATCTTCGGATTGggaatatttcatttgaaaatcaTATATCTAACAATATTTCAAGTCAGGGCTCTGACTCTTATACAGTGAAATCAGATAAAACACAGCAAACTTATACTTCAAATGGTCAGTCTGTGGTATCTGATTATGATCAACAGTATCCTTATTATCCAGAACAACAAGAAGACCcagaaattaaattttctcgCAGTTCAGAGTATAATGCACAGTTAgataattcaaatgtatttgCATACAATATGCCAGTAATGGGATCAGGTGTCAAACTGCCAACTCCTGTCATGCCAACAGTATCTAGGAGAGGAAATGATTATGTCAAAATTGTACCTAAACAAGGTAACCTACTTGTTAAAAGTAATGTAGCTGGAGTGCAATATATACCTTCAGGAGTTAAACCAATGCATGTAATGATGCCTGCTGCACCACCATTTGTTCAAAAGAATATACAAAATAGCATGATTATGACTGGCAATTTACCTGCTAGCCAATTATTGGATCCAAAATTAATGGCACCACCATTAAACAACCAATTTAATCAAATGAGTCATTCGGGAGCTTTTACCCCGGGAACGACAGTAGTCACACAAAACTCACAAATAATTTATAGGGAGATGGTCCATAATATAGATGGTAAGCCATTCATTTCAAGTATGCCGGCAGTACTTGGCGGCCCTGAGAGTGTTACAAATGTTGCTCAGAGCAGTTCAATGTACCAAAATGTTATGGTGGTAGATCAGTTCGGTAATACTTCTTGTATGTATACAACACCACAACATATATTATCAAAGCCGTGCACACCTATGTTCAATGAAAATGTACCATTAATGCAAAATGTGCCAGATAAAAGtggatccagtgtaattactgatggtaataaaactttaattattgaaGTAAGTCCGATATTATCGGACGAACCAATAAATGATGCAAATCAAAACCCACTACCTCAACAGAATGAAAATCCagttaataaaatgattgagcAAGAAAAGTCAGATTCATCTATTGAATCCCCTGGGCCTAGCAAAGGCCTGAAAATTCTTAGTAATATTAAGGTAGAGGTTCCTGTACAGCATCACAAAAATATGCTCAATACAGTAATGGACTTGACAGGTTCAACTGACTCAGACTATATGGAACGTTCTATTACTCCAGAGAAAATTTTACCCGACTTAGACCACAACAGTTCTATATTATCTGATAAATGTACTCAGCCGTCTAATACTAGTGACAATTTAATCTCGAACGCATTTTCTGTGTTAAAACATTCAAGTAACTCACACAAAGAAATTGCCCTAAAATCATCTGTTATAGAGAATAAGCTCGATACAGAATTTTCAGACAGTTGCCCAGTTCCTGAtcttatttgtaatgaaaagCCGTCTATATCCCCATGTAGCGAATTGTCTGACCATGGGGACAATTCTAATGATAGACTTATTATTCTATCACCAAAACCGGAAAGTAGTAAAAAATACCAAAGCCTGGCAAAGAATATTAACGTTGAAAAGAAATTACCAATTAAATCGCAACCCTCCaacaaatacaatcaaattcaaaaacataaccctctaaaacttaataatattttcgtgaAAAAGCAAAAGAAACAATTGCAAATAAAGAATGCGAAGCTGACATCGCAAATCATTACAAAACCAGTTGAACGAGAACCACGAGCGTCCTCGTCGACGTGTAAACAATTAGAGAACTTTGCAATGAACAAAACACACCAACCTGAAAAATGTGATAACAAGGGTAAGTTGCAGGCTGTCTCAAtagaaaaaattgaaaataacaacGACGACCGCAATGAGTTTGATGCCAACACTGAGGTGCAATCGATGGACATCGAGCCAGTCACGCCGTCAAACCTGAACCATCCATCCCAATACAATCCTACAGTGGTTAAAGAAGAAATCAATTCTAACGAATTTAGCAATGGAGCCGATAGATCCACAGACCTTGCACCAATGGAGACGCTCAGGCCAATCAATGTGGTCAATTACAGCAATATAACGGTCGAATTTGACGACGATTCTAATCACAGAGAGCTACTAGATTTAGAAGCTGCATCGAAAAACAAGCAATTTGTATCAATGATGAATGAAAACTACTTTGGGGATAACATTTACGCAGACTATTTTACTCCGGATCGCGTTGAAGCTTTCGACGCGGAAAAAGAATCGAATTACGCCAAGGAGAGCGCTAAAGAAGGGATGTACGTTTGGGGCGAATCATCGCAGAAggaaagtgaatttgttttaCCCAATTTTATACACGAGAGCTATAAAATAGCTGAGAGCAATGGGATGGACTATTCAGATATGGGTGCTGGGGATCATATAGATGGCGACAGGTGCGAGGGGGACAGCAAAGCTGACGTGCTGAGTGAGAGCAGGAGCGACAGTGAACCGACTTTGAATATCTGCGCCGATGAGAGGATGCCACCTCGTGGGGAACTCAGCGGACAAGAAAGCAACGAAGACATGGAATCACCTTGGACTGGgatgtaTTCGGGAGTACCTCCGGCGGAGCCTTACGATCTGATGGCGCGGGAGAGTTGGGTTTCAGATGGGTCCGACATCGATGCTAACGAAAAAACGGAAAACGTTATTGAGGAAGAACTCCACTTCCCGAAGGTGAGAACGTACACTTGCGCACAGTGCGGGGTGAAGTTCCCGTCGCTGAAGGAGCTGCGCGCGCACAAGGCGCTGGTGCACGCGCTGCCCACGTGCTCCGGCGCCAAGACCTCCTACAGCCGCCTCATGACCGCCCGCGCCATCAAGAAGGAGGAGAAGCCGGACGAACACGTGCTGGCTGGTAATCTATTGTCGTTGGACACAAAGGAGACGATGGCTTCGACGATGTTAAAAGTATACGACGCGATCACCGAAGCGAAGCCACAAATCGAAGGTTTAATAAAGCAGGAAACGAAAAAGAGACGAAAAGATTACGTGTGTCCAACGTGCAAGGTCGACCAGGTCACCGACGCGGCCTTCCACGCCCATCTCAAGATACACCCGCTCGAGTGCCTCACGTGCGGGAAGTGTTTCTTCAAACGCGCCTACCTGGCGTTACACATCAAGACGCACTTGGGGATAAAGAACTATAAATGCGAGGTATGCGAAAAGCGTTTCATAACACGTCAGAAGTTGTCGGAGCACCACAACGTGCACACCGGCCGGACGCCCGTCAAGTGCACCATCTGCGACGACACCTTCCGACGGTACTCCAACATGGTGCAGCACAGGGACCGGCACCACTTCAAGAAGAAGAGCAAGGTGCGCGACTTCGTGTGCCACTGCGGCGCCGTGTTCCACTCGCGCGCCAAGCTGCTGTGGCACAAGGAGACGCACGACGAGAAGCCCAAGGCGTGCCTGTACTGCAGCGACAAGTTCGTGCACGCCGCGTCGCTCACGCGCCACGTGCGCCGCTCGCACAACGAGTACTTCCTCGCCGACCGCGCCGACCGCGCCGACCGCGCCGCCGACAAGGGCCGCATGGAGAACGTGCCCTGCCCCGTCTGCAAACAGATTTACCTTAGATCAAATTTGCGTGCTCACCTGCTGACACACAGCGGGAAGAAGCCGTACCACTGCATCATCTGTAACAAAGCATTCACAACCAAGTGGAACTTGAAACTTCACCGTTGGACGCACTTGAGTCGGTCCGCTAAACCGTTCAAATGTACTCTGTGTAAAGGTGCATTCATCAGGCAATCCGATTTCGTATCCCACATGAACGCGCACAAGTCCGTTCGACCGTACACCTGCAACTACTGCGGCTGCCAGTTCATCAGGAAGTACAACTGCCAACGACATGTTCGAGAACACGAAATGGAAAAGAAGTTTGTGTGTAAAGTGCCCGAGTGCGGTAAATCGTTCCATAggagttattatttatctgaaCATATGAAAGTGCACAGTGGGGCGAGGCCTTTTGCATGTAATATATGTGGGAAAACGTCGAGTAATAAGTCCAATCATAATAAACATGTAAAGATACACCACGCAAGGGAGCCAGTAGCGACTGAGGCgtaa
Protein Sequence: MDQRVQCPVCTLYLHSGMTLESHLDTHPKDQVIRALCSLSAKTVNFGSRTPTPLNSERSFRSRSRTPATDDSGRWANSHRNSDNERYWRRTPSRTKSTPLSTSVSRNPTPDLRIGNISFENHISNNISSQGSDSYTVKSDKTQQTYTSNGQSVVSDYDQQYPYYPEQQEDPEIKFSRSSEYNAQLDNSNVFAYNMPVMGSGVKLPTPVMPTVSRRGNDYVKIVPKQGNLLVKSNVAGVQYIPSGVKPMHVMMPAAPPFVQKNIQNSMIMTGNLPASQLLDPKLMAPPLNNQFNQMSHSGAFTPGTTVVTQNSQIIYREMVHNIDGKPFISSMPAVLGGPESVTNVAQSSSMYQNVMVVDQFGNTSCMYTTPQHILSKPCTPMFNENVPLMQNVPDKSGSSVITDGNKTLIIEVSPILSDEPINDANQNPLPQQNENPVNKMIEQEKSDSSIESPGPSKGLKILSNIKVEVPVQHHKNMLNTVMDLTGSTDSDYMERSITPEKILPDLDHNSSILSDKCTQPSNTSDNLISNAFSVLKHSSNSHKEIALKSSVIENKLDTEFSDSCPVPDLICNEKPSISPCSELSDHGDNSNDRLIILSPKPESSKKYQSLAKNINVEKKLPIKSQPSNKYNQIQKHNPLKLNNIFVKKQKKQLQIKNAKLTSQIITKPVEREPRASSSTCKQLENFAMNKTHQPEKCDNKGKLQAVSIEKIENNNDDRNEFDANTEVQSMDIEPVTPSNLNHPSQYNPTVVKEEINSNEFSNGADRSTDLAPMETLRPINVVNYSNITVEFDDDSNHRELLDLEAASKNKQFVSMMNENYFGDNIYADYFTPDRVEAFDAEKESNYAKESAKEGMYVWGESSQKESEFVLPNFIHESYKIAESNGMDYSDMGAGDHIDGDRCEGDSKADVLSESRSDSEPTLNICADERMPPRGELSGQESNEDMESPWTGMYSGVPPAEPYDLMARESWVSDGSDIDANEKTENVIEEELHFPKVRTYTCAQCGVKFPSLKELRAHKALVHALPTCSGAKTSYSRLMTARAIKKEEKPDEHVLAGNLLSLDTKETMASTMLKVYDAITEAKPQIEGLIKQETKKRRKDYVCPTCKVDQVTDAAFHAHLKIHPLECLTCGKCFFKRAYLALHIKTHLGIKNYKCEVCEKRFITRQKLSEHHNVHTGRTPVKCTICDDTFRRYSNMVQHRDRHHFKKKSKVRDFVCHCGAVFHSRAKLLWHKETHDEKPKACLYCSDKFVHAASLTRHVRRSHNEYFLADRADRADRAADKGRMENVPCPVCKQIYLRSNLRAHLLTHSGKKPYHCIICNKAFTTKWNLKLHRWTHLSRSAKPFKCTLCKGAFIRQSDFVSHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMEKKFVCKVPECGKSFHRSYYLSEHMKVHSGARPFACNICGKTSSNKSNHNKHVKIHHAREPVATEA*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01506613;
90% Identity: iTF_01508317;
80% Identity: -