Nful012374.1
Basic Information
- Insect
- Nylanderia fulva
- Gene Symbol
- -
- Assembly
- GCA_005281655.1
- Location
- NW:11151-20833[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 1.4e-06 0.00063 19.4 0.0 12 43 48 80 42 81 0.89 2 9 0.034 15 5.4 0.3 12 28 100 116 94 130 0.77 3 9 0.0085 3.9 7.3 0.6 11 23 162 178 152 188 0.77 4 9 0.55 2.5e+02 1.5 1.1 4 30 271 293 269 307 0.64 5 9 0.45 2.1e+02 1.8 0.6 13 28 431 446 424 466 0.74 6 9 1.2e-06 0.00052 19.7 0.1 12 43 491 523 485 524 0.87 7 9 0.074 34 4.3 1.1 12 28 543 559 537 573 0.76 8 9 0.0017 0.77 9.5 1.1 5 25 601 623 598 632 0.75 9 9 1.1 4.8e+02 0.6 1.3 4 29 714 735 712 750 0.64
Sequence Information
- Coding Sequence
- ATGgaaattactattaatattcAAGTACAGGAAGAAAAAATGCATAATCACATATTGAATGAACATAAGAATCCGAACATTTATCGGAGGCGTATGACTTCGTCATCAGAAATCAGCTCAAAAGAATTGAAATTTTATaccataaaaaattatgacgTCGAATGCAACTTTTGTGATAAAATTTATCCTGGAAAAGACATAACGTTTTCTAATTTACGCACTCACATAACGATGTTTCATGCATTTGAAACGAATAAAGCAGAAAAAATCTGCAATTGGCTGCGCAAAAATTTTGATATGGATGAGGAACGTTGTCGCTGCAACCACTGCGAACTTGAAATTCCAAATAAAccagtatttttattaatccaTTTGAATCAAATGCATGAGTTTGAACTACCTCTGGATATCACACCAAGATtGTTATGGAATTTTACTACAAAATTCAAAAACGAATGGCTatcgtattattattatattacgaAAGATTTAGTTACAGAagatgagaaaaatataaaatgcaatattTGTGATACATGTTTTACTGTTAGCATATATCACATAAAGATAATACTGCACATAAATTATGAACATAGAAAAAcatctgaaaaatttatttctacaGAAGACGCACAGATAAGAAAGCTATTTTCTGTTGAAGACAATCAATTGaaatgcaattttaataaatgtaattattcttGTCCTATTCATTTTAATGGTCTACAAGAGGAACCGAAACATCATTTACTCAACAATCATAAACTTAATCGCGCTCAAACCAATGATCTTTACAACTGGCTATTGTTGTATCAACATGTATTACATATTGAAACATCAAAATGCATAATTTGCAAGGACATATTTCAACAtaagttgtttagtttaatgACTATGAAGCATTTTATAAAAGAACATCGAATCGAATATCTGTTTCATCTAATATCAAAGAAATTATTAGATAAATTGGAGATTTTAAATTCTGATAACAATACCGATAATGTTGCTTTACCAGGAAGCAGCAGTCAGCAGCCAGTTCAATGTATTGAAGAAAGTTCTTCCAAAGATTCATCAACAAGATTATTAAATGATAAAGATTTAGATGTTTCAAATGTTGATGATGATGCTGAAGATAATGCTACATCAAGCTGTCAGCAGCCAATTCAGAATGTTGATCAAAATTTAACCAAAATTTCACTAACGAGTAGTGCACGACAGATAATACAAAGTAGATATAACATAGACACGCCAAACTTAGAAGACAATTGGTTTCTGGATTATTATACAATAGAAAATAATACGGCAAGATGCGATATTTGTTACTGTGTAATGgaaattactattaatattcAAGTACAGGAAGAAAAAATGCATAGTCACATATTGAATGAACATAAGAATCCGAACATTTATCGGAGGCGTATGACTTCGTCATCAGAAATCAGCTCAAAAGAATTGAAATTTTATaccataaaaaattatgacgTCGAATGCAACTTTTGTGATAAAATTTATCCTGGAAAAAACATAACGTTTTCTAATTTACGCACTCACATAACGATGTTTCATGCATTTGAAACGAATAAAGCAGAAAAAATCTGCAATTGGCTGTGCAAAAATTTTGATATGGATGAGGAACGTTGTCGCTGCAACCATTGCAAACTTGAAATTCCAAATAAAccagtatttttattaatccaTTTGAATCAAATGCATGAGTTTGAACTACCTCTGGATATCATACCACGATtGTTATGGAATTTTACTACAAAATTCGAAAACGAATGGCTatcgtattattattattttacaaaagatTTAGTTACAGAagatgagaaaaatataaaatgcaatattTGTGGTACATGTTTTACTGTTAGCATATATCACATAAAGATAATACTGCACATAAATTATGAACATAGAAAAACgtctgaaaaatttatttctacaGAAGACGCACAAATAAGAAAGTTATTTTCTGTTGAAGACAATCAATTGaaatgcaattttaataaatgtaattattcttGTCCTATTCATTTTAATGGTCTACAAGAGGAACCGAAACATCATTTACTTAACAATCATAAACTTAATCGCGCTCAAACCAATGATCTTTACAACTGGCTATTGTTGTATCAACATGTATTACATATTGAAACATCAAAATGCATAATTTGCAAGTACATATTTCAACAtaagttgtttagtttaatgACTATGAAGCATTTTATAAAAGAACATCGAATCGAATATCTGTTTCATCTAATATCAAAGAAATTTTTAGATAAATTGgagattttaaattttgataacaataCCGATGATGTTGCTTTACCAGGAAGCAGCAGTCAGCAGCCAGTTCAATGTATTGAAGAAAGTTCTTCCAAAGATTCATCAACAAGATTATTAAATGATAAAGATTTAGATGTTTCAAATGCTGATGATGATGCTGAAGATAATGCTACATCAAGCTGTCAGCAACCAGTACAGAATATTGATCAATATTTATCCATAATTTCACTAACGATTAAAGATTAA
- Protein Sequence
- MEITINIQVQEEKMHNHILNEHKNPNIYRRRMTSSSEISSKELKFYTIKNYDVECNFCDKIYPGKDITFSNLRTHITMFHAFETNKAEKICNWLRKNFDMDEERCRCNHCELEIPNKPVFLLIHLNQMHEFELPLDITPRLLWNFTTKFKNEWLSYYYYITKDLVTEDEKNIKCNICDTCFTVSIYHIKIILHINYEHRKTSEKFISTEDAQIRKLFSVEDNQLKCNFNKCNYSCPIHFNGLQEEPKHHLLNNHKLNRAQTNDLYNWLLLYQHVLHIETSKCIICKDIFQHKLFSLMTMKHFIKEHRIEYLFHLISKKLLDKLEILNSDNNTDNVALPGSSSQQPVQCIEESSSKDSSTRLLNDKDLDVSNVDDDAEDNATSSCQQPIQNVDQNLTKISLTSSARQIIQSRYNIDTPNLEDNWFLDYYTIENNTARCDICYCVMEITINIQVQEEKMHSHILNEHKNPNIYRRRMTSSSEISSKELKFYTIKNYDVECNFCDKIYPGKNITFSNLRTHITMFHAFETNKAEKICNWLCKNFDMDEERCRCNHCKLEIPNKPVFLLIHLNQMHEFELPLDIIPRLLWNFTTKFENEWLSYYYYFTKDLVTEDEKNIKCNICGTCFTVSIYHIKIILHINYEHRKTSEKFISTEDAQIRKLFSVEDNQLKCNFNKCNYSCPIHFNGLQEEPKHHLLNNHKLNRAQTNDLYNWLLLYQHVLHIETSKCIICKYIFQHKLFSLMTMKHFIKEHRIEYLFHLISKKFLDKLEILNFDNNTDDVALPGSSSQQPVQCIEESSSKDSSTRLLNDKDLDVSNADDDAEDNATSSCQQPVQNIDQYLSIISLTIKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -