Nful011631.1
Basic Information
- Insect
- Nylanderia fulva
- Gene Symbol
- -
- Assembly
- GCA_005281655.1
- Location
- NW:4086625-4093453[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 4.3e-08 1.9e-05 24.3 3.7 3 44 28 66 27 66 0.97 2 9 0.079 36 4.2 4.9 11 44 79 112 75 112 0.88 3 9 6.1 2.8e+03 -1.8 0.3 18 43 133 156 131 157 0.58 4 9 8.7e-08 3.9e-05 23.3 4.0 4 44 228 265 225 265 0.96 5 9 0.0062 2.8 7.7 3.3 11 44 278 311 275 311 0.90 6 9 6.1 2.8e+03 -1.8 0.3 18 43 332 355 330 356 0.58 7 9 1.9e-09 8.6e-07 28.6 2.6 4 44 428 465 425 465 0.96 8 9 0.0005 0.23 11.2 5.7 11 44 478 511 474 511 0.89 9 9 6.1 2.8e+03 -1.8 0.3 18 43 532 555 530 556 0.58
Sequence Information
- Coding Sequence
- ATGGAGATTACTAAAGAAGAAAGTTGTTCATCGTATCCACCTTGTGTTCCTACCAATAAAACATCAAGGTCTGATGAATGGATATGGCATTACTTTACAATATATAACGGCGAATTTATCAAATGCAATATTTGTTTTGATGTATTTAACCACGATATAACACACGGTTTAAAGATGCATATGAGATCACAACATTCTGCAATTTATAATAACTCAGAAACAAAATGGACACATTCTAAAATAAATCACAAATTAAAATGCCATTATTGTGATAATTCTTATGAACCAATATATCGAACTGATTATTTGATAAACCACATAAAAAATAGTCATAAACTTAATAAAGAAATAGCAAATAAACTCCAAACCTGGGTGATTGATCAATTCATTATTCCGAAATGCGAAATTTGCAAACAATTTAGTAAATACCATGcctttatatttatgatacatTTAAAGAAAGTTCATGATGTCATTGTACCTCAAGAATTCATACCACAGAGATTATCaattagattaaaaaatctttttgatccttgtaaaaatgttgaaaacatTCCAACATCAACCAGCAATAATCATCAGCAGCCATCTATAATTAGAACTTACTTTAAGGATTATGATCCGACTTTTCATTCTTCCGATATAATTGAaaCCTCAAGGTCTCGTGACTCGTGGTCATGGCATTACTTTACAATATATAACGGCGAATTTATCAAATGCAATATTTGTTTTGATGTATTCAACCACGATATAACACACGGTTTAAAGATGCATATGAGATCACAACATTCTGCAATTTATAATAACTCAGAAACAAAATGGACACATTCTAAAATAGATCACAAATTAAAATGCCATTATTGTGATAAGTCTTATGAACCAATATATCGAACTGATTATTTGATAAACCACATAAAAAATAGTCATAAACTTAATAAAGAAATAGCAAATAAACTCCAAACCTGGGTGATTGATCAATTCATTATTCCGAAATGCGAAATTTGCAAACAATTTAGTAAATACCATGcctttatatttatgatacatTTAAAGAAAGTTCATGATGTCATTGTACCTCAAGAATTCATACCACAGAGATTATCaattagattaaaaaatctttttgattcttgtaaaaatgttgaaaacatTCCAACATCAACCAGCAATAATCATCAGCAGCCATCTATAATTAGAACTTACTTTAAGGATTATGATCCGACTTTTCATTCTTCCGATACATTTGAcaGAACCTCAAGGTCTCGTGACTCGTGGTCATGGCATTACTTTACAATATATAACGGCGAATTTATCAAATGCAATATTTGTTTTGATGTATTCAACAACGATATAACACACGGTTTAAAGCAACATATGAGATCACAACATTCTGCAATTTATAATAACTCAGAAACAAAATGGACACATTCTAAAATAAATCACAAATTAAAATGCCATTATTGTGATAATACTTATGAACCAGTATATAGAACTGATAATATGATAAAGCACATAAAAAATAGTCATAAACTTAATAAAGAAATAGCAAATAAACTCCAAACCTGGGTGATTGATCAATTCATTATTCCGAAATGCGAAATTTGCAAACAATTTAGTAAATACCATGcctttatatttatgatacatTTAAAGAAAGTTCATGATGTCATTGTACCTCAAGAATTCATACCACAGAGATTATCaattagattaaaaaatctttttaatccttgtaaaaatgttgaaaacatTCCAACATCAACCAGCAATAATCATCAGCAGCCATCTATACTTAGAACTTACTTTAAGGATTATGATCCGACTTTTATTTCTTCCGATACATTTGAATTATCACATACTTCAAGCAATCTTTTAAGTTCTGGTAACGATACTGCAACATCAAGCAGTTTTTATCAGTCAATTGTCAGTACTGACCTTACTGATTCTGAGGAATGTGTCGATATGTGTGATACAGAAGTGGAAAAGTTTTTGGAGTGTGATAAAGAAGAAAGTTATTCAATTATCCCGGTCGTAACTCTATTATCACATACTTCAAGCAATCTTTTAAGTTCTGGTAACGATACTGCAACATCAAGCAGTTTTTATCAGTCAATTGTCAGTACTGACCTTACTGATTCTGAGGAATGTGTCGATATGTGTGATACAGAAGTGGAAAAGTTTTTGGAGTGTGATAAAGAAGAAAGTTATTCAATTATCCCGGTCGTAACTCTATTATCACATACTTCAAGCAATCTTTTAAGTTCTGGTAACGATACTGCAACATCAAGCAGTTTTTATCAGTCAATTGTCAGTACTGACCTTACTGATTCTGAGGAATGTGTCGATATGTGTGATACAGAAGTGGAAAAGTTTTTGGAGTGTGATAAAGAAGAAAGTTATTCAATTATCCCGGTCGTAACTCTATTATCAAATACTTCAAGCAATCTTTTAAGTTCTGGTAACGATACTGCCACATCAAGCAGTTTTTATCAGTCAATTGTTAGTACTGACCTTACTGATTCTGAGGAATGTGTCGATATGTGTGATACAGAAGTGGAAAAGTTTTTGGAGTGTGATAAAGAAGAAAGTTCAATTATCCcgtttgataaatattaa
- Protein Sequence
- MEITKEESCSSYPPCVPTNKTSRSDEWIWHYFTIYNGEFIKCNICFDVFNHDITHGLKMHMRSQHSAIYNNSETKWTHSKINHKLKCHYCDNSYEPIYRTDYLINHIKNSHKLNKEIANKLQTWVIDQFIIPKCEICKQFSKYHAFIFMIHLKKVHDVIVPQEFIPQRLSIRLKNLFDPCKNVENIPTSTSNNHQQPSIIRTYFKDYDPTFHSSDIIETSRSRDSWSWHYFTIYNGEFIKCNICFDVFNHDITHGLKMHMRSQHSAIYNNSETKWTHSKIDHKLKCHYCDKSYEPIYRTDYLINHIKNSHKLNKEIANKLQTWVIDQFIIPKCEICKQFSKYHAFIFMIHLKKVHDVIVPQEFIPQRLSIRLKNLFDSCKNVENIPTSTSNNHQQPSIIRTYFKDYDPTFHSSDTFDRTSRSRDSWSWHYFTIYNGEFIKCNICFDVFNNDITHGLKQHMRSQHSAIYNNSETKWTHSKINHKLKCHYCDNTYEPVYRTDNMIKHIKNSHKLNKEIANKLQTWVIDQFIIPKCEICKQFSKYHAFIFMIHLKKVHDVIVPQEFIPQRLSIRLKNLFNPCKNVENIPTSTSNNHQQPSILRTYFKDYDPTFISSDTFELSHTSSNLLSSGNDTATSSSFYQSIVSTDLTDSEECVDMCDTEVEKFLECDKEESYSIIPVVTLLSHTSSNLLSSGNDTATSSSFYQSIVSTDLTDSEECVDMCDTEVEKFLECDKEESYSIIPVVTLLSHTSSNLLSSGNDTATSSSFYQSIVSTDLTDSEECVDMCDTEVEKFLECDKEESYSIIPVVTLLSNTSSNLLSSGNDTATSSSFYQSIVSTDLTDSEECVDMCDTEVEKFLECDKEESSIIPFDKY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -