Basic Information

Gene Symbol
ncor1_1
Assembly
GCA_005281655.1
Location
NW:954085-994230[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4e-06 0.0034 17.2 0.1 3 43 816 856 815 859 0.96
2 2 8.4e-16 7.2e-13 48.1 0.1 3 45 1282 1324 1280 1325 0.95

Sequence Information

Coding Sequence
ATGCAGAGCGGCTCCGCTTCGCTCCGATGCTCCGATCCAGCAACAGCGGAAGAGAGCAATCGCGGCAACGCCGCATTCCCGAGTGCCGAGCGACAGGCGCATTCTCCCCTTCCAGGGTGTCTTGGGGCGCATGCGCGTTGCCGTATCCCGACACGCGAAACCGCGCGCCAACCAAGAACCACCCCCGCGCGTCTTCATCCTCTCGTCTGTTTCTCTCTTTATCTTTCTTTTCGAACCGGCTCCGCCGCGGCGCACGCGCACGCGGATCTTGCCACGTGTGTGTGGCTCTCGCTGCCGCCGAAATGCCGTCCATCGGAGCAGGAACGCGCTCTGCCGTGCGAGAACGCCAATGGCAACTATATTCCCGCCGCGAATCGTTTTCGACGCGTCGCGCGATTGGCCGGCCGTTTCAGCCGGGTCACCAGACCAACGCAGAGCTATGTCAACATCAAGAGCAGCAGCCCGGTGTCTCCGAGGACGGTAGGAACGGGAGCGACGTACGTGCAGGGTGGCGCGGCCGCGTCCTCCGCGGCGGCTGCGGCGGCGACTGCCGCCGCGACCGCGGGCGGCCCTGCCGTCGTCGCTGGAGTTAGCACCGCGACGAGCAGCGGTAGCAACGGCGGCGTGGTCGGCGTCTCGAACGTCTTATCTGCAGCGGCGGGTGGCAACAGCAACGTGAACAACGGCAACGCGAACAACGGGGGTGCGAGCAAcggcggcggtggcggcggcaGCGGTCCTGGTGGCGGTGGAAACGGCAGTGGCGGCGGTCCTGGTGGCGGAAGCGGCGGTCCTGGAAGCGGCAACAGCAACAACAGCGGCAACGGCGGTGCTGGAGGCGGCAGCGGTGCCACGAGTGGCACCCCTTACGTCACCGTACCATCGATGCTCCGTTACATTCATTCCTATCCGCCGACCTCGGTGTCGGCGTCGGCGGTAGCGGCGGTCGTCACCACCGCACCGTCGCCGGCGGCACCCGTATCCGCACCCGCACCCGTACCCCCTCCGACTCAGCCGACCGTCATCGCCAGCCAAACACCGCCACCGCCGCTCACCGGGACTGCCTATGCCGCGAGAGACGCGTATCGCACCGGTACCACGAACGTGAACGAGAGGATCGCTATCAGCGTGAGCAACAGTCCTCTGTCGCAAGTCGGCGTCGGGGTAGTGGCCGAGTACAGCGGCATGGGAGCCGGCGGCAGAGGCGATCGGCCGAGGATATCCCTCTTGCCGCCTACTGGCTCCTCGGTGACGCCAATATCGTCGCCGACCGCGGCTGCCGCGTCCGAGTATCACACGGCGGCGGCGAGAAACCCGTCGCGGGTTTCAGGCCTCATGCCCGTCCAACCGGATCAGTATTGTACTCGCACCGCCGTCGATATGGCCAGTCTGCAGCAAGACACGCCGCCCTTCAAAAAGATCCGTCTGGGTCAGCCGCATCAGCAGGTCCAGCAGTTGCAATCACAGCCGCAGTCGCGCTGTCAGAGCCTGTCGCCCGCGGACCCGTGCGGCGGCAAGCAGGAGCAGCAACAGCATGTGCAATTGCAGCAGCCGCTTAGGATAGACATCAGGGAGCAGCCTGCCGTGGGTGCATATACGCCACAAACGGAAGCCATTTCGCCTACTCTTCCAGAGCCGAATACGCAAGAGGAAGCTCTTAGAAGTACCAAGGACGAGCTCTTGCAGCAAATCGGCAAGGTCGATAGAGAAATTGCCAAGAGAGAGAACCAGTTGAATATGTTGCGGAAGAGGATAAAAGAATTGGAAGAAGCAGCGAATAAGCCTCTGGAAGCGAGTGGTCTCAAACGTAATATTGAGGAACAATCGCAGCAACCAAAGCATCAATCGTTGGCGCAAAAGATCTATGCTGAAAATAGGCGAAAGGCAGAAGAAGCGCATAGACTCATGGAAAAACTAGGCCCCAAGATAGAGCTACCTTTATATAATCAACCGTCGGATACGAATGTGTATCAGGAGAATCGCACACGCCATCAAACGTGTATGCGAAACAGGCTCATAGCAACGTTGCGGAAAGATCACACTGAACGTGCATCTCTTCATCGGCAACAAACGCAAACGTACACAATCTTGGTTCAAGAGTGGCATCGGAAGGTAGAACGGCTGGAGGCGACGCAGAAGAGAAAATCGAAGGAGACAAAGAATCGCGAGTTCTTCGAAAAAGTGTTCCCCGAATTGCGAAAACAGAGGGAAGACAAAGAGCGTTTCAACAGAGTTGGTGCTCGCATCAAGAGTGAAGCCGATCTTGAAGAGATAATGGATGGTCTACAGGAGCAAGAGCTCGAGGATAAGAAGATGCGCTCGTATGCAGTTATACCGCCTCTTCTGTTGGATGCGAAGCAACGAAGAATTGCCTTCCAAAATCGGAATGGACTGCTCCAACCAGAGGAGTTGGAAGCTCTGCACAGTGAACGTAAATTGATCAATGTATGGAGTTCCGTGGAGCACGAGTCATTCAAGGAGAAATACCTTCAGCATCCCAAAAATTATGGAGTGATAGCTCAATCGTTAGAACATAAGGGCGTTCAAGATTGTGTACATCACTACTACCTCACTAAGAAAACGGAGAATTATAAACAGCTTCTACGAAAGTCGCGTCAACGAACGCGAAGTTCTCGGAATAATCCGAATAATAAAGTAAATAATACCAGTTCGAGCATCGGATCTATAGATATTTTAACGACAGGGGTAACGACGAGATTGCAGCGGGAGCAGCAAAAGACTCAGGAGAATCCCATAGATATTTTAACGGTAGGGATAACGACGAGGTTACAGCGGGAGCAACAACAGAAGACTCAGGAGAATCCTCATAATAGTTCGGTAACAGCTACGTCTACATCGACAACGAGTACCACGGTTACATCGAGCGTGTCGTCGACTACTGTTACGACTACGTCGGTTACGACGACGACGACTCCCCAGAGCTCGACAGCATCGGGCGTTAGCGTAACGGCAGATTCCACAACGTCATCAACGACAACGACAACGACGTCAGTCTTGAACACGACAGCGTCGAGTGTCTCGGCGACGTCGACGACGTCCAACGCGAAGGATTCCAGGGAGACGAGCAAGGAGAACAAGGAGAACAAGGTCGACTCGAAGGAGTCTCATAAGGATTCAAAGGAAGAAACGCAAGAGACGTCGGGGAAGGATGTTAAAGTAATaATCGAAGGAAAAGGCGCGCTGTCTTCATCCACGTCGTCGTTGAACATCAACGCAACGAATACTTCGATTCAGTCGGACTTTAAGGAGTCGAACAAGAAGAAACCAGGTTGCAGGGACACAAGCGGTAATAGTGCTAATGTGGCAACCAGTAGTAGAGTGAAGGATAAGAAGAAGGAGAATCATGTTCCCATGGAAACTAGTGACGAGGAGGCACCGTCGATCGACGTCGTCGAGAGCGGCAGACAGATAGGACCTCACGCCTGCACGGTGTGTCAAAGCGTCGTCGAGGGTAGCGCCCACAGTCGCGCTTTACCGCGCAGCCAGGCCTCGCAATACGGTCTGCGGGAGGATCAGGTGCCAGCTGGCGCGCGCGTCTGCAACACCTGCAGGTGCAAGGCCGTACGAGGACGTTACACCACCTGCCCGTTACCCGGATGTCCGAATTTAAACAGCTCCAAGTCCAGGATAAAACGGCTGAGAGCGTTGCCCTCCAAATGGCTCGATTTACCGCTGGAGATCCGCGAGCCGATCGCTCAAGAATTCCAAATACCAAATAATGCGACGAAATGCTGCTCGGCTTGCTTCAGTCGTATATCGCGCCGATTGGCGCCACATCTTACCGGTGGTACCGAAGCCTCCGAAGATGGTACCGATGCGCGCCAGTGGACGGACGAGGAACTGGATCTGCTCCGCAAAGCGCTTCGAGAATATGGTACCAATTGGCCGAAGATCGCTGAACAAATACCCGGCAAAACGAGTCAGCAGTGCAAGAGCTACTATTTCGCTTACCGAAAGAAATTTAGTTTCGATCAAGTTGTCAGCGAGCATTACACGTTGTTAGGCGAGGAACGGAGGCCACCGTACGTGACCGACGAGGAGGAGAGCGGAAGTAGCACTAGTAGTTGCGACGAACTAGCCGTTCACGATTCGAGTGACACAGCCAGTGCAGGAAGTCCAGCGACCACCATGACGGGTAGTAACGCGTCAGTGATACCGAGCGGTGGCTCTGCAACGACATCATCGTTGTCTTTTCAGCGTCCTGGCGAGCTTGGATCGTTGGAAAAACTGGGCGACAAACTGGCGGACGTAGCTGTGGTATCACTTGTTCCGCCTGCCGGATCGTCTCATCAGTCTTCCAGCAGCGGAGGCGCTGCCGCTACATCCGGTGGTGCTAGAGAGGATTATGACAGTTCTGCCACGGAGACAGCGGACGAAGGTCAGGGAGGTGCTGACTTAGATAATGGCAGTGTTGTGGTGACTATGACAACCGCCAGCGGCAATGCAGCGTCGTTGCAACAGCAGAGCCAACAACAGAGTCAATATCAACAACAGCCATCATCTGTCACAGCACATTCGCCTCCTTCAACAACGAGTAATTCAAATCCGATTACCGTAAAGGATCTCATGCTAAGCGTCATCGAGACGTCATTAAAACGCACTCCCAATAGTCCGGCCGATGGCGGCTCGTCCGCGCCTAATAGTTCCGGCGGTACACCGACGATATCCAGTATTTTGAAAACAGATCATCGCAATGACATAACGTACGTTCGCGGTTATAAACCATCCTCGAGTATGACAAACACAGCGTTGTCCAACAGAGATTCAAATCTGGCAACACTTTCTGTTGTTTCGGGACCTCATCATGGCCATCGATCTGCTCCTAGTCCACAGCAAATCGGTCAGATGCAAGCTACTATTACTCCCTGCATACCCGGTGTGCCCACCAGTAGTCAATCGGATATGCTACCTAAGGAAGGCTTGGTTGTCATGCAAGTGCAGCAAGCGCTTCGAGAAACGGAAGGCACGCTTGACTTGAGTATCAAAAAACCCCGATTGCAACAGGATTACAATCATTCGCTTCAAATTCACAAGCCGACGATCGCTCTCTATCGACCAGAACCGCCGCCTGGAGCGTACTATCATCCTCACACCACGCCTCATCTTGAGCAGGGACGCAACGCGAAGAGTCCGCTGGTCTACGCTCCGACGCCAGGCCGACCGCAGGCGTCCATCACACCGAAGATGAACAAAGTGCCATCCGTGCCGCAATCTCATCCCAAGCTGTCGCCGAAACTCGGCAGCATGGGCACGCCGGGGCACAAGGGTGGCTCCATTACGCATGGCACGCCTGTGTCCACGGCGCGTTACGAGGGTCTGCTGCGGCAAATGACGCCGCCTGGCAATCCGCCGGTAAGCGCCGCAAACGTCAGCGAACGCAGCGGCTCCATCAACGCCAGCTCTACCGGTCCGGGTCCGCCGAAAGAGAGCGGCGGGGGCTCGATTACTCAGGGTACACCCGTACTTCCGTTTGCAGTGGATAAACGCGGCACATCCGTTTACGACTATCATCGAGGTACCATTCGACACTCGCCCGTCACGGGTACCGGCAACGTACTGCCACCACCTCCAGGACAGGGTCACGCGAGTCAAGCGACATCATCGGCGGTGGTGGTGAGCCACAGTGGTAATCAGTATAACTCTTATTCCACTGCCGGCCGGCTACCGCCCAACTACACGACGGAACAGCAAATGTCCAGACAGATCATCATAAATGATTATTATACCAGTCAACAAATGAATCAACTCACTCGTGGTGGTAGTAGCACTGGCGCGTCCGTCACCAGCGAGATGATAGGTAAGAACGAGCctccaccaccaccaccaccatcgtCGACTCTCTATTACGCCAGCACACCGCCTCCACCTCCTCAGACGCATACGCAGCCGCGACAGGGTGTTATTCAAAGGCACAATCCGCAGAAGCAGATGCATTATCCGCCACAGCAGCAACATGATGCACTAAACAACTTGGTTGAGGTGGCGATTAAGCAGCCTACTCTGCCAGTGCCGCATCCACACAGTCATCCGGCTGCGTCGGGCGGTGGTGGTCACGAGGGTCTTGGTAAAACTATGGCAGATCGTCTATTGGCTGATCGCTATGATAATAATCGCGCGTTTCATGAACAAGAGATACGGCTACAGGAACATCGTATGGCCGCCGAGCATAGACTCGCGCAGCATCAACGCGAGCGGGAGAGGGAACGCGATATCGTTCATTTGCGAGAGAAGGAGGAGCATCGTCTGCATCGCGAGAAGGAATTGCAGCAGTTTGAACATCGTCTTGCGGTGCAGCAGCATCATCAGCACCGTGAGAAGGAGTTTCAGCAGCAGGAACACCGTCTCGCGCAGCACCGAGAAAAGGATATGCACGAACATACTCGTCTTCAGATTCGAGAAAAGGATATCCAGCACGAGCACCGACTCATACATCAACGAGAGAAGGAGATCCAGCAACAAATGGCGGCGGCGCAACGCGAGAAGGAGCACGAGCAGCACCGATTGGCCGTGCATCAGCGCGAGAAAGAGCTACAGCATCAAGAACAGAGACTTGCCATGCAGCAACAACGTGAAAAAGAGATCCAGCAGCATGTCGAGCGTCGTCTGGCCGCGCAACAAGCGCGGGAACGTGAGCGAGAGATGGTGCAAATACAGCAAGCTCAACACATTCAGCAACACATTCAGCAGCAACGTTTAGAACTCGAAAGAAGACACATAGCCGCACAGATATTCAGAGACCAGCAGCTGGAGCGAGATTCGTCGAGACTGTTGAGCAGCGGATTCTCGCAGTCCTCTCGAATTCAGTCTCAACAATctcagcagcagcagcagcagcagcaacaatcATTGCGTCAGAGTCAGTCCTCCAGTCAACAGAACGATTCGTCGTCGACCCTTACAGCCGCCAGTCTAATAGACGCTATCATAACGCATCAAATCAATCAGGGCGTTGATAGTGCTAGTGGAAGTTCTTCGAGCAATCAGCCGACGCGTGCTGGCGATCGTCTTTTCCAGgGTTTGCATCGCGATCCTCCGCAAGAACCTAACGGCATAGCCCATAGTCCCGCCAGTGAAGGGAGCGGGGGTGGAGCAAGCGGCAACGGAAGTGGCTGCAGTAAAGCGATGACTCTCGGCGAGCATGTCGAGCACATTATATCTAAAGATTACGGCCCACCTCACTCGTCATATAGACCTTACCCATATCCAATCTCCGATGATCAATGGAAAAGACGGAAACACAACGAGCCAGACTCGGTGAAGACCGGGGACGAGCGTCAGATAATACGCGTCgcgcagcagcagcaacagcagcagacGCAACAGCAGCATCAGTCATCGGGAAAGCAACAATACCATTCGGTCGAGCCAGTCTCCCCACCGGAGACGACCGCGAATCACTACGGACGTCGCTTTTACGAACCGAGcactgccacatccacttccGGAACTCCCTCCAACAAGTCGCATCTATCGCCGTTTGATTACGTGAAGAACAAGATTGTCGAGGTGATGCGCACCGAGGACGACAAGGCtggcggcggtggcggcggcggcggcgacaCCGCGGGCTCTGACAGAAACGGAGGCGGCAACACCTCGGTTGTCGCGACCGAGAAAGACGAGAAGGGTTCGGGGAACGTTGATAGAAGTCCAGGTGGCGGCGGCAGCGGAGCTGGAAGTGGCGGCGGTGGCGAGTTGGTGATCGACGAGGCGGGTGGTCCACCTACCCGCGAACAGCCGCCACCAGCCCCTGCAGCCACCACCTTTTATCCGTTCAGCGCTTTAGGAGTTCACACCGGTCCACCGCCGGCCCCGCCACCCGCCTCCGCTACATCCGTCTCCGTGAGCAAGTCGGAACAGATGCAGGCCGAGCCAGCGCCCCTGATGTCGGCGCAATACGAGCCGCTCTCGGACGAGGATTGA
Protein Sequence
MQSGSASLRCSDPATAEESNRGNAAFPSAERQAHSPLPGCLGAHARCRIPTRETARQPRTTPARLHPLVCFSLYLSFRTGSAAAHAHADLATCVWLSLPPKCRPSEQERALPCENANGNYIPAANRFRRVARLAGRFSRVTRPTQSYVNIKSSSPVSPRTVGTGATYVQGGAAASSAAAAAATAAATAGGPAVVAGVSTATSSGSNGGVVGVSNVLSAAAGGNSNVNNGNANNGGASNGGGGGGSGPGGGGNGSGGGPGGGSGGPGSGNSNNSGNGGAGGGSGATSGTPYVTVPSMLRYIHSYPPTSVSASAVAAVVTTAPSPAAPVSAPAPVPPPTQPTVIASQTPPPPLTGTAYAARDAYRTGTTNVNERIAISVSNSPLSQVGVGVVAEYSGMGAGGRGDRPRISLLPPTGSSVTPISSPTAAAASEYHTAAARNPSRVSGLMPVQPDQYCTRTAVDMASLQQDTPPFKKIRLGQPHQQVQQLQSQPQSRCQSLSPADPCGGKQEQQQHVQLQQPLRIDIREQPAVGAYTPQTEAISPTLPEPNTQEEALRSTKDELLQQIGKVDREIAKRENQLNMLRKRIKELEEAANKPLEASGLKRNIEEQSQQPKHQSLAQKIYAENRRKAEEAHRLMEKLGPKIELPLYNQPSDTNVYQENRTRHQTCMRNRLIATLRKDHTERASLHRQQTQTYTILVQEWHRKVERLEATQKRKSKETKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQELEDKKMRSYAVIPPLLLDAKQRRIAFQNRNGLLQPEELEALHSERKLINVWSSVEHESFKEKYLQHPKNYGVIAQSLEHKGVQDCVHHYYLTKKTENYKQLLRKSRQRTRSSRNNPNNKVNNTSSSIGSIDILTTGVTTRLQREQQKTQENPIDILTVGITTRLQREQQQKTQENPHNSSVTATSTSTTSTTVTSSVSSTTVTTTSVTTTTTPQSSTASGVSVTADSTTSSTTTTTTSVLNTTASSVSATSTTSNAKDSRETSKENKENKVDSKESHKDSKEETQETSGKDVKVIIEGKGALSSSTSSLNINATNTSIQSDFKESNKKKPGCRDTSGNSANVATSSRVKDKKKENHVPMETSDEEAPSIDVVESGRQIGPHACTVCQSVVEGSAHSRALPRSQASQYGLREDQVPAGARVCNTCRCKAVRGRYTTCPLPGCPNLNSSKSRIKRLRALPSKWLDLPLEIREPIAQEFQIPNNATKCCSACFSRISRRLAPHLTGGTEASEDGTDARQWTDEELDLLRKALREYGTNWPKIAEQIPGKTSQQCKSYYFAYRKKFSFDQVVSEHYTLLGEERRPPYVTDEEESGSSTSSCDELAVHDSSDTASAGSPATTMTGSNASVIPSGGSATTSSLSFQRPGELGSLEKLGDKLADVAVVSLVPPAGSSHQSSSSGGAAATSGGAREDYDSSATETADEGQGGADLDNGSVVVTMTTASGNAASLQQQSQQQSQYQQQPSSVTAHSPPSTTSNSNPITVKDLMLSVIETSLKRTPNSPADGGSSAPNSSGGTPTISSILKTDHRNDITYVRGYKPSSSMTNTALSNRDSNLATLSVVSGPHHGHRSAPSPQQIGQMQATITPCIPGVPTSSQSDMLPKEGLVVMQVQQALRETEGTLDLSIKKPRLQQDYNHSLQIHKPTIALYRPEPPPGAYYHPHTTPHLEQGRNAKSPLVYAPTPGRPQASITPKMNKVPSVPQSHPKLSPKLGSMGTPGHKGGSITHGTPVSTARYEGLLRQMTPPGNPPVSAANVSERSGSINASSTGPGPPKESGGGSITQGTPVLPFAVDKRGTSVYDYHRGTIRHSPVTGTGNVLPPPPGQGHASQATSSAVVVSHSGNQYNSYSTAGRLPPNYTTEQQMSRQIIINDYYTSQQMNQLTRGGSSTGASVTSEMIGKNEPPPPPPPSSTLYYASTPPPPPQTHTQPRQGVIQRHNPQKQMHYPPQQQHDALNNLVEVAIKQPTLPVPHPHSHPAASGGGGHEGLGKTMADRLLADRYDNNRAFHEQEIRLQEHRMAAEHRLAQHQRERERERDIVHLREKEEHRLHREKELQQFEHRLAVQQHHQHREKEFQQQEHRLAQHREKDMHEHTRLQIREKDIQHEHRLIHQREKEIQQQMAAAQREKEHEQHRLAVHQREKELQHQEQRLAMQQQREKEIQQHVERRLAAQQAREREREMVQIQQAQHIQQHIQQQRLELERRHIAAQIFRDQQLERDSSRLLSSGFSQSSRIQSQQSQQQQQQQQQSLRQSQSSSQQNDSSSTLTAASLIDAIITHQINQGVDSASGSSSSNQPTRAGDRLFQGLHRDPPQEPNGIAHSPASEGSGGGASGNGSGCSKAMTLGEHVEHIISKDYGPPHSSYRPYPYPISDDQWKRRKHNEPDSVKTGDERQIIRVAQQQQQQQTQQQHQSSGKQQYHSVEPVSPPETTANHYGRRFYEPSTATSTSGTPSNKSHLSPFDYVKNKIVEVMRTEDDKAGGGGGGGGDTAGSDRNGGGNTSVVATEKDEKGSGNVDRSPGGGGSGAGSGGGGELVIDEAGGPPTREQPPPAPAATTFYPFSALGVHTGPPPAPPPASATSVSVSKSEQMQAEPAPLMSAQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-