Basic Information

Gene Symbol
ct
Assembly
GCA_005281655.1
Location
NW:753348-887201[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6e-28 4.4e-24 84.0 0.0 2 72 542 613 541 618 0.95
2 3 1e-29 7.4e-26 89.7 0.0 2 77 951 1031 950 1033 0.91
3 3 5.8e-31 4.2e-27 93.7 0.0 3 75 1188 1261 1186 1265 0.95

Sequence Information

Coding Sequence
ATGCAGGCCTCCGCGGAGGCCAACTCGCGGAATATTACGACCATGGAATGGCTCTACAAGAAGGAGCCCTTGTTCACGCTCGCCCACTTCTGGCAACAGAGAGCAACTTCGGCGGAGAAAGAAATAGCCGCATTGAAAGAACAACTCGCCGCAACGAATGACAGCAATTCCAAGACTGAGGGACACCAATTGTCTCAGCCTCCGCAGGGAAGCGATCAACAGCAGGTACACGATGCCAGCAATCCCAGAAGGACGCCGAACAGCAACCTCGAGCAGGAACTGCAGGCCAAAGACAAAGAGATTAACCAGTTGGTCGAGGAGGTGTCCAGGCTACAGCAGAGTTTGCAACGCCTTCAGGAGACAAGTGCGCAAGCAACGGCGCGGCTCGAAGAGGAACTCGAAGTGCGCAGGCAGCACATCAGCAGACTGGAGAGCAAATTGGAACGGCAGAGGGATTATGATGACCTGAAGCGCGAAATAAGCGTGCTGAGGTCAGTCGACCTCTCGCAGATACCAACCGGCGAACCTGGAAAGAGCCTGGAGCATCTTCTTATGGAGCGCTTCAAGGCGCTTCAGCAAGCGGAGAACCTGAAGCCCTCCAACACACCCGACGCACTCGGTGGATTATCGTCACCCCTGCAGCGCGCCTCGACCGCCTCGCCCCACGGGGTCGGAGGTGTACCACCTACATCCCATGTGTCCTCCCAACAACCACCGCCACCACCTCCGACTGCAGTCTCTCTCCCTCCACGTTCCACCCCGACGCCCTCTTCGGCCACTTCGACGACTTCGAGCCTCCTTTTCCCGCCACCCCTCCAGAACGTCGAGACCTTCGGCTCGTTCCTCGGTGAAGAAATCGTTGCCAATTGGAGGCGGACGTTGGAAAGATCTATCATGAgtcagcagcaacagcagcagcagcaacaacagcagcagcagcaacaacaacagcagcaacagcagcagcaatcACAGCCATCTCAATTAAGTCAGTTAGCTCAACAGCAACAACAGTTGCAACAAGCTCAGCCACACATGGGTTTGCATCCGCCAACAACGCCAAGTAGTTTAAATCATCTTCCATCACCGGGCGCGGATCCGTCGTCCACCTCGAATACCCCGGCAAAATCGAATACGCCGATCGGTACGGTGTCCCTGGGCAATTTAGACGTCATCGAAAAAGCGCCAACACCGGTATCGGGACACGAGACGCCGGCACCACCGACGCCATCCTCCACAACCGCCTTAACATCACCGCCGAGCTTCCAGCCGCCGACGTCGCTGGTGGAGACCAGCACCCCTTCGGCATCCATCAACGGCGGCGGCCTCACCCCCGGCGTGCCGAGCGCACCGCCTCCGAAGAGCCCGGCCGATCAAGAATCATGTCACAATAACAACAATAACAGCCATCATCTGGCGAACAACAACATCGGCGGCCTGAGCGTCCTCGACACGCTGAAGAGTCCGTTTCGCTTCGACGATCGAACGTATCCGTTCCGATTCGGCGACGAGTTTGGGGCCGCCGGTATGGCCGGTCGGCTGGGCGAATCTCTCATTCCAAAGGGCGATCCCATGGAGGCGAGGCTCCAGGAGATGTTGCGCCACAATATGGACAAGTACGCCTCGCAAAATCTCGATACTCTTCACATAGCGAGGCGGGTGCGCGAGCTATTGTCGATACATAATATCGGTCAGAGGCTGTTCGCCAAGTATGTCCTCGGATTAAGCCAAGGCACGGTCAGCGAGTTACTTAGCAAGCCCAAGCCTTGGGACAAGCTGACCGAGAAGGGCCGCGACAGCTATCGGAAGATGCATGGCTGGGCTTGCGACGAGAACGCCGTACTGCTGCTCAAGTCCTTGATCCCAAAGAAGGAGTATGTTTCAGGCAAGGAGCAGGGAATGCCAGCATTCGCACGTGGACCACAGGATGGTGGTCCGCCGGAAATAAGTGACGAAAGATTGGCGCATATTCTCTCGGAATCGAGCCATATGCAAATGAGAGGCGAGCATGAGGTATCGAACGACGCCGATAGCAAGAGTCCGAGTAGGATCGGTTGCCCGAGTCCGTTTAACAAGGACAGACTGGACAGCCAAAACAGGAGACTGAAGAAGTACGAGAACGATGACATTCCCCAGGAGAAGGTGGTGAGAATTTACCAGGAGGAGCTGGCCAAACTGATGGGCAGGAGAGTAGAGGATCTTCGTCCGCGAGAATTTTCTAGTGCGATCTTTCCACATTTTTTCAGTGGCACTCAAGGCAGTCTTCAAGGTATCGAGCGCACTCAGGAAGACATTCGATTGGCATTGGACGCTTATCATCGTGAGCTTCAAAAATTGAACGCTGCACCAGGTCAAAATCCCTCAATGACCGGATTGCCAGGATTACCTGGACTTCCGGGCTTGCTGGCGCTCCAGCAGCAAGCTCTTCAGCAACATCATTTAGCCGCGAATGGCGGCAGTGGTGCTGTTCAGGATTTGAGTTTAGGCAAAGTGGATCCGCGCAATAAAATGATAAACGGCGTATCGGAGGAAGAGAAGGAAAAGATGGAGGAGGCGATGAGACACGCCGGTAGCGCTTTTTCCTTGGTGAGGCCGAAGCAGGAATCGACGGGTCCTCAATCAACACCCGGCGGTTCTAGCGCGAGTTCTCCCCTGGGCAATTCCATACTTCCTCCCGCGATGACACCCAACGAGGAGTTTGCCAGTGCGGCGGCAGCCAGCCCCTTGCAGAGGATGGCCTCCATCACAAATAGTCTGATAAGTCAACCGTCCACACCAACCCATCATTCGGCTAATCAAAGGCCTTTGAAAGCTGTGCTTCCTCCGATTACGCAGCAGCAGTTCGACATGTACAATAACCTCAACACTGAAGATATCGTAAAGAGGGTAAGTCGTCTCGTGAAAGAACAGCTGTCGCAATATTCAATTTCGCAACGACTGTTCGGCGAGTCGGTGTTGGGTCTGTCTCAGGGATCAGTGTCGGATCTCCTCGCACGTCCTAAACCATGGCACATGCTGACTCAAAAAGGTCGTGAGCCCTTCATTCGAATGAAGATGTTCCTTGAGGACGATAACGCAGTACACAAACTGGTTGCCAGCCAGTACAAGATCGCTCCAGAGAAGTTGATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCGTGTGGAACACCCATGAAACCTATGCCGCCGACGAAACTCGTGCAAGAACAACTGCAAAACGCAGCGAAGGCGCAGGCCGCCGCTCAGGCAGCCGCgcaagcagcagcagcagcgcAACATCAGCAGGAGAATCAGATGCAGCTTGGCCCGCCTCAGCAGAGTCCTCAGCATCCGCAACATCCGCAGCCTCCGCCACCGATGATGCTGACGCCGCCCGGACCTCATCATCCGCACACTCAGCTCAGCATGCAAGAGTTACAAAAGAagcaacaacagcagcagcagcaaatGTCACTGCACTCGCCGCATCATCAGATGGCACCATCGCCTCTTCGCAGTCTTCATCCGCACATTTCACCGAGCGTATACGAGATGGCCGCTCTTACACAGGATCTTGACACACAGACGATTACCACGAAGATCAAGGAAGCGTTACTGGCGAATAACATCGGCCAGAAGATCTTTGGCGAAGCAGTTCTCGGTTTGTCGCAGGGCTCCGTCAGCGAGTTGCTGAGCAAACCGAAACCGTGGCATATGCTGAGCATAAAAGGCCGAGAACCTTTCATCAGAATGCAACTTTGGCTGTCAGACGCGCACAATGTCGATCGACTCCAGGCGTTGAAGAACGAACGACGGGAGGCAAATAAGAGACGACGCAGCAGCGGTCCAGGTCACGACAATAGTTCTGATACTTCGAGCAACGACACTGCCGAGTTTTATCATGCGGCATCACCTGGCCCGGGACCCACTACCGGCAAGAAGCAGCGTGTTCTCTTCTCAGAAGAGCAGAAGGAAGCTCTCAGACTCGCATTCGCTCTGGATCCGTATCCCAATGTGGCCACCATAGAATTTCTTGCCGGTGAACTTGCCCTCTCTTCAAGGACGATAACAAATTGGTTCCACAATCATCGAATGAGACTCAAGCAACAGACGCCGCATGGTCAACCAGAGCCGCAATCGCCACGAGAACCCGGCCAACCGTTTGACCCCGTTCAATTCAGATTGCTATTGAACCAAAGACTGCTGGAGATTCAGAAAGAGAGACTGGGTCTAGGAAATGTACCCTTACCTTACTCTCCGTACTTTAATCCCAACTTGGCGGCTCTGGTGGGTAACGCGCTGAAAGAACAATGTTCCGGGCTCGATCTCTCGATGAACGCCCTGAAGAGGGAACCGAATCAGGAATTTGAAGATGAGGATGTCGACGACGCGATGAGTAATCTCGGTAGCGAGGATTCTGAAGGTTCGGCTGGCAGTATAAAAAGAGAACCCACAGAAACGCCGACGGCGCCCACGACGGTCAGGTCCAATAGAAGGAAACCCGCGGCACCGCAATGGGTTAATCCCGAGTGGCAAGAACCGACGAGAGCGGGTGACGAAGTCATCATCAACGGCGTTTGCGTGATGCAAACGGATGACTACGGTGTGAAGAGGGAGACCGAAGAGACTATAAGAGTCGAGCCAACCCCAGTGCAAGACCGATACGAGGAGGATGCCCAGAGCGACGTCTCTTCCGTATCCGGTAACAATGGGCCCGATCGAGACAGCCCACTGCCCAGTCCAAAATCCGGTCAGAATAGTCCAACGACGTCACTCAGACCGCCGTCGGCGCAACAGACGCAACAGTCCACGGAGGAGAGTCCGAAGGACGTGGTAAAGCACGAACCCGAGGAAACGTGGGATTACTAG
Protein Sequence
MQASAEANSRNITTMEWLYKKEPLFTLAHFWQQRATSAEKEIAALKEQLAATNDSNSKTEGHQLSQPPQGSDQQQVHDASNPRRTPNSNLEQELQAKDKEINQLVEEVSRLQQSLQRLQETSAQATARLEEELEVRRQHISRLESKLERQRDYDDLKREISVLRSVDLSQIPTGEPGKSLEHLLMERFKALQQAENLKPSNTPDALGGLSSPLQRASTASPHGVGGVPPTSHVSSQQPPPPPPTAVSLPPRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRTLERSIMSQQQQQQQQQQQQQQQQQQQQQQQSQPSQLSQLAQQQQQLQQAQPHMGLHPPTTPSSLNHLPSPGADPSSTSNTPAKSNTPIGTVSLGNLDVIEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTSLVETSTPSASINGGGLTPGVPSAPPPKSPADQESCHNNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRTYPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRHNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVLLLKSLIPKKEYVSGKEQGMPAFARGPQDGGPPEISDERLAHILSESSHMQMRGEHEVSNDADSKSPSRIGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVEDLRPREFSSAIFPHFFSGTQGSLQGIERTQEDIRLALDAYHRELQKLNAAPGQNPSMTGLPGLPGLPGLLALQQQALQQHHLAANGGSGAVQDLSLGKVDPRNKMINGVSEEEKEKMEEAMRHAGSAFSLVRPKQESTGPQSTPGGSSASSPLGNSILPPAMTPNEEFASAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVSRLVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAAAQHQQENQMQLGPPQQSPQHPQHPQPPPPMMLTPPGPHHPHTQLSMQELQKKQQQQQQQMSLHSPHHQMAPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTTGKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYSPYFNPNLAALVGNALKEQCSGLDLSMNALKREPNQEFEDEDVDDAMSNLGSEDSEGSAGSIKREPTETPTAPTTVRSNRRKPAAPQWVNPEWQEPTRAGDEVIINGVCVMQTDDYGVKRETEETIRVEPTPVQDRYEEDAQSDVSSVSGNNGPDRDSPLPSPKSGQNSPTTSLRPPSAQQTQQSTEESPKDVVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00729955;
90% Identity
iTF_00221825;
80% Identity
iTF_01077366;