Nful013060.1
Basic Information
- Insect
- Nylanderia fulva
- Gene Symbol
- retn
- Assembly
- GCA_005281655.1
- Location
- NW:162709-275847[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-25 3.2e-22 78.4 0.1 1 89 268 354 268 354 0.96
Sequence Information
- Coding Sequence
- ATGGACTCAGCCGACGAACAAGACGTCGAGACGACTCCCGGAGGTATGCCCAACGGGGCAAATGGACCAAACGGAACTAACGGAGCTCACGAGCCAAACGGAACCAACGGGCAACACGCGACACCGGAGGGGTCACTGTCATATAAAGAAGAGAATGACTCCGATCTGGATGACGATGAGGTACAAGATGATGAAGACTTCCTTTCGCAACCGCTTCAAGGCAGCTCGCAATCGCTGCCGATGGACATTGGGGCTGCTAGCACATCTTCATTAGATCAAATAAACAGTTTAATGAACATGCATCCGCAAATTCTGACGAAGCTTAAAAGCATGTGCACCGAGGGAGAGAAGGTGCGAACCATGAACAATTATTCTCTGCAGAATTTAATGGCCAGTCACTTCTCCATGCCCTTCATGCCCTCGTACGGATCACCACCGCCAACACCGCTGTCGATACCGCCAATAATACCGCCGCGGCAGCAACaccagcaacagcagcagcatcCGCAGAACAATCATTCGCAGCCACTCGTGTCGAATACCGGATTGATCGTCGATCCTACAATTATGCTGTCGAGACCTCCCGCCAATTCGCAGACCGGCGAGTCGCCGCAACGAGTCTGCAGAAACAGCAACAGCGAATCATCCTCGCAAGGAAGTAGCAGAAATAACGGAGAGTCTCGTGAGAGTGAGCCTCGCGGCGCGGCGACGGTGAACAATCAGCATCCGTCCGGACCCAACTGGAACTTCGAAGAACAATTCAGACAGGTGCGTCAGCTCTACGAACTTGACGACAATCCTGAGCGAAAGGAATTTCTTGACGAACTGTTCACCTTTATGCAACAAAGAGGGTCACCGATTAACCGTCTACCGATCATGGCTAAATCTGTACTGGATCTTTACGAACTTTATAAATTAGTGGTGATACGCGGTGGCCTGGTCGAAGTGATCAACAAGAAGCTGTGGCAGGAGATTATCAAAGGTCTCCGGTTGCCTGCGAGCATCACTTCCGCCGCCTTTACTCTACGCACGCAGTATATGAAATATTTGTATCATTATGAACAACATAAGGAAAAACTCTCGACCAATGAGCAGCTAAACACAGCAATCGAGACAAATCGTCGAGAAGGACGTCGAAGCAACAACTACCCTGGTTATTCTGGCAATAATGAGAATATGGTTGGACGAAGCCAACATAATTCGCTTCCACCCAATACTTTGCCTTTGCCTATGCCCCTCAACATAAGCCCGCTGGAAATGCACAGATCACAGTCGCCATTCGTCAACGGTCATccgcagcagcagcagcagcagcatcatCCTCACAACCCACATATTTCGAATCTCAGCAGCTTTTCAGACTATATGCTGCAGATACTGAGAGATAATAGAAATTCTGGCACCAACTCTATAATTCAACAACAGAGTGATCCGTCACCACTCTCCGCGGAAGCACTTAACGCATTAGAATTGTCCAAACTGTCGCTTTGGAACAatatatgtcaaaataataataaaatctacgTAAGATCCGGTCAACAACCCTTTTCTCCGCCAACATCTCACTCACCAATAGCACCAGTAAATAGTCCGGAACCACAAAGAGAAGCTCTAGATCTTGCAAATTCTACTCATAGgTCAGATCCGGTATCTCCAAGTGCTAGATCTGTAGATTCGCCACCAGCAATTATGCCCAGAGGCATAAAAAGAAGCCAAGaatctctctctccttccaccccGTCTAACAAAAAAATGCTTATTAAGGAAGAACAAAATAATGAAAGGAATAGTATGCGCATTACGCAGATGGTCAGGATACGAGaagATAGCCGAAGAGAACTATTCATTAGCGTAGACATCGATGGTGTACTCTATGAAGGCGTCCTACCAGCCAAAAACGATGATAGCAACAGTCCATCATCGAGTTCAAAACGTTCATGA
- Protein Sequence
- MDSADEQDVETTPGGMPNGANGPNGTNGAHEPNGTNGQHATPEGSLSYKEENDSDLDDDEVQDDEDFLSQPLQGSSQSLPMDIGAASTSSLDQINSLMNMHPQILTKLKSMCTEGEKVRTMNNYSLQNLMASHFSMPFMPSYGSPPPTPLSIPPIIPPRQQHQQQQQHPQNNHSQPLVSNTGLIVDPTIMLSRPPANSQTGESPQRVCRNSNSESSSQGSSRNNGESRESEPRGAATVNNQHPSGPNWNFEEQFRQVRQLYELDDNPERKEFLDELFTFMQQRGSPINRLPIMAKSVLDLYELYKLVVIRGGLVEVINKKLWQEIIKGLRLPASITSAAFTLRTQYMKYLYHYEQHKEKLSTNEQLNTAIETNRREGRRSNNYPGYSGNNENMVGRSQHNSLPPNTLPLPMPLNISPLEMHRSQSPFVNGHPQQQQQQHHPHNPHISNLSSFSDYMLQILRDNRNSGTNSIIQQQSDPSPLSAEALNALELSKLSLWNNICQNNNKIYVRSGQQPFSPPTSHSPIAPVNSPEPQREALDLANSTHRSDPVSPSARSVDSPPAIMPRGIKRSQESLSPSTPSNKKMLIKEEQNNERNSMRITQMVRIREDSRRELFISVDIDGVLYEGVLPAKNDDSNSPSSSSKRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -