Nrev032579.1
Basic Information
- Insect
- Nycteola revayana
- Gene Symbol
- nfxl1
- Assembly
- GCA_947037095.2
- Location
- OY855748.1:15425981-15428452[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1 3.6e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.0052 1.9e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 19 1.4e-07 0.0049 17.8 16.1 3 19 186 202 185 202 0.95 4 19 0.78 2.8e+04 -3.8 0.6 6 10 227 231 226 231 0.78 5 19 7e-07 0.025 15.6 13.0 3 19 239 255 237 255 0.92 6 19 0.37 1.3e+04 -2.7 0.8 5 10 279 284 279 284 0.86 7 19 1.9e-10 6.8e-06 27.0 13.4 1 19 290 308 290 308 0.99 8 19 5.8e-07 0.021 15.8 18.3 3 19 345 361 344 361 0.93 9 19 1 3.6e+04 -5.3 2.2 5 10 384 389 384 389 0.88 10 19 1.1e-06 0.038 15.0 18.2 1 18 395 412 395 413 0.97 11 19 4e-09 0.00015 22.7 16.9 1 19 422 440 422 440 0.99 12 19 0.0001 3.7 8.6 6.4 9 19 488 498 486 498 0.89 13 19 0.002 71 4.5 6.5 3 11 509 517 508 518 0.90 14 19 0.17 6.2e+03 -1.7 3.6 14 18 547 551 547 552 0.87 15 19 0.12 4.2e+03 -1.1 0.1 8 12 568 572 567 573 0.82 16 19 5.7e-06 0.2 12.7 4.6 1 11 588 598 588 599 0.97 17 19 1 3.6e+04 -7.2 4.4 6 10 616 620 613 620 0.65 18 19 1.5e-05 0.53 11.3 13.6 4 18 630 645 628 646 0.85 19 19 3.6e-06 0.13 13.3 14.2 1 18 687 705 687 706 0.88
Sequence Information
- Coding Sequence
- ATGGCGCGGAGATATAGAGATGCCGCCGCAAAACTGCAGCAAAATGTGCAGAAACATTTAAAAGAAATGAAAGAGCTATCATCTTCTGAAGATGAAGAAGCTTTTGAGAACAGCGTGCTGGATGGCGTCTTCCAGAGCTACTGGAGAGGTGGTGGCGATACTCATATGCTGAATAGAACTAAGAATCTTCTAGAAGAAGCGATCAGCGGCCGCTCAATCACTTGTCTTATTTGTATTGGCTCAATCAAAAGAACACACCCAATATGGAGTTGCGATCACTGTTATTCCTACTTCCACCTATCTTGCATTCAAAAATGGGCAAACGACAGCATCAGTTTACGTAGTGAACAACCCCAAGCCCCCATTAGCGTTGTGAAACCACAGAAAATTGAATGGTGCTGCCCAAAATGTCGGCAATCTTATTCTAAAGAGGAAATACCACGACGGTACCGCTGTTATTGTGGTAAAACTGACGATCCTCCGTACCATCCGTGGCTCATACCACACACTTGTGGAGAGGTATGTGGAAAAAGAATGTCCACTGGGAACAACTGCCAACACAAGTGCTTGCTGCTCTGCCACCCGGGCCCCTGCCCACCGTGCCCTCAGACCGTCAATGGAATATGCTACTGTGAAAAGGAACGTAAAAGAGTCAGGTGTAGTGCTGCCAAGTGGTCTTGTGGACAAGTCTGCAAGAAAACTCTTTTGTGCAAAACTCACAAGTGTGAAAACAAATGTCATGAAGGTGAATGTTCCACCTGCAGCTACACCAGCATCCAGCCCTGTGCATGTGGGGCTCAAAAAGCCAAGAGACCATGCAATGACCCATTATGGAGATGTGATAAACCATGTAATAAACCATTCTCCTGTGGCTACCATAAATGTGATAAGATATGTCACTCTGGGGACTGTGGCCCTTGTCCCAACTCTGGCATGACATCCTGTCCTTGTGGTGCAAACCAGCGCTATGTGCAATGTCCTGATATTATGGAAACATGCTTGGGTACATGTAACAAACTGCATGCAGGCTGTGAACATAACTGCCCAGAAAAATGCCACAAAGGACCATGCCCACCCTGTCAAGAGATGGTTTTAAAGAAATGCCTGTGTTCTACCCATACAAGATCCTTGCCTTGTAGTAAAGAATTTAAATGTGAGACAAAGTGTAGAGGTATCCGGCCGTGTGGGAAACATGGCTGTGCTAGGAAGTGTTGCAGTGGAAACTGTCCCCCTTGTGAGAAAACTTGTGACAAACCTCTTCACTGTGGCCGACATAAATGTACAAATATTTGTCATCACGGTCCTTGTTATCCATGTCCCTTAGAGTCAAAAGTAACTTGCAGATGTAAAGAAACATACATATCTGTTCCATGTGGAAGAGAAAGACAAACAAAGCCCCCGAGGTGTAGTCTACcatgcaaaattaaatacaaatgtgGCCATGTTGATGAAAATAAACATTCCTGCCATTTTGGAGATTGTCCTCCATGCAAAGCTATTTGCTGCAAACCATACCCCAAGTGCAATCACCAGTGTAAAGCAGTATGTCATGCATATGCTGCTGTTGTCTTCAAACAAGTGGAAAAACCAGCGACTCCATGGGAAGTGCAACCtccaaaaactaaaataatgaagCTGGATTGTCCACCATGTGACACACCAGTACCTATTGTGTGCTTTGGTGAGCATGAAACAGATGATCAACCATGCCACTCTGCTACTCGCAGACCATGTGGTAGAGACTGTGGCCGTCCATTAGCCTGTGGTAATCACAATTGTTCACTACTCTGCCACCTTTATAGTCCACTCCCTGAGTATCCAAATGTGCCTTCAAGCTGTAAACAATGTCAACGAGAGTGTTCATTTCCTCGTCCAGCCAAATGTGCTCATAAATGTGCTATTCGAGCTTGTCATCCTGGACCATGTCCACCATGTGAGATACTGGAACGACTTGCCTGCCACTGTGGTTTAACAGAAATATACCTGCATTGCCGTGAGTTGGCTACAGTGACTGAACAAATATTATCTTGTAAACAACAGTGTCCGAAAAATCTTCAATGTGGTCACCGTTGCAGGAATACTTGCCATCCTGGGAACTGTGGCAGTCAAGAATGTACCAAGAAAACTAAAGTCCACTGTCCTTGTGGAAACATTAAGAAAGATGGTCCATGTAATGCTGTACGTAATGGTGATATGAAGATTGTTTGTGATAAAACCTGTGAAGCTAAAAAAATAGCAGCTAAAATTGAGAGTGAGAAAGAAAAGCAGAGATTGAAAGAACTAGAGGAAGAGAAGAACCGTAAAGAGTTAGCCGAATATGAATGGAAATTAAGCGGTAAAAAGAAGAAATACAAGGAAAAGAAAGTTGTTATCAATATGGATGACAGAAATTTTGTCCAAAAGTATTGGATTCCTATATTGTCATTTATAGTTGTTATTTTAGCAGCATTTTACTAcatctattatatttga
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLKEMKELSSSEDEEAFENSVLDGVFQSYWRGGGDTHMLNRTKNLLEEAISGRSITCLICIGSIKRTHPIWSCDHCYSYFHLSCIQKWANDSISLRSEQPQAPISVVKPQKIEWCCPKCRQSYSKEEIPRRYRCYCGKTDDPPYHPWLIPHTCGEVCGKRMSTGNNCQHKCLLLCHPGPCPPCPQTVNGICYCEKERKRVRCSAAKWSCGQVCKKTLLCKTHKCENKCHEGECSTCSYTSIQPCACGAQKAKRPCNDPLWRCDKPCNKPFSCGYHKCDKICHSGDCGPCPNSGMTSCPCGANQRYVQCPDIMETCLGTCNKLHAGCEHNCPEKCHKGPCPPCQEMVLKKCLCSTHTRSLPCSKEFKCETKCRGIRPCGKHGCARKCCSGNCPPCEKTCDKPLHCGRHKCTNICHHGPCYPCPLESKVTCRCKETYISVPCGRERQTKPPRCSLPCKIKYKCGHVDENKHSCHFGDCPPCKAICCKPYPKCNHQCKAVCHAYAAVVFKQVEKPATPWEVQPPKTKIMKLDCPPCDTPVPIVCFGEHETDDQPCHSATRRPCGRDCGRPLACGNHNCSLLCHLYSPLPEYPNVPSSCKQCQRECSFPRPAKCAHKCAIRACHPGPCPPCEILERLACHCGLTEIYLHCRELATVTEQILSCKQQCPKNLQCGHRCRNTCHPGNCGSQECTKKTKVHCPCGNIKKDGPCNAVRNGDMKIVCDKTCEAKKIAAKIESEKEKQRLKELEEEKNRKELAEYEWKLSGKKKKYKEKKVVINMDDRNFVQKYWIPILSFIVVILAAFYYIYYI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932106;
- 90% Identity
- -
- 80% Identity
- -