Basic Information

Gene Symbol
alpha-Spec
Assembly
GCA_947037095.2
Location
OX344845.2:2572921-2588127[-]

Transcription Factor Domain

TF Family
zf-MIZ
Domain
zf-MIZ domain
PFAM
PF02891
TF Group
Zinc-Coordinating Group
Description
This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 0.00088 11 6.9 0.3 24 43 491 510 487 511 0.94
2 9 0.00088 11 6.9 0.3 24 43 560 579 556 580 0.94
3 9 0.012 1.4e+02 3.3 0.1 24 42 629 647 625 648 0.92
4 9 0.00088 11 6.9 0.3 24 43 698 717 694 718 0.94
5 9 0.00088 11 6.9 0.3 24 43 767 786 763 787 0.94
6 9 0.00088 11 6.9 0.3 24 43 836 855 832 856 0.94
7 9 0.00088 11 6.9 0.3 24 43 905 924 901 925 0.94
8 9 0.00088 11 6.9 0.3 24 43 974 993 970 994 0.94
9 9 0.00088 11 6.9 0.3 24 43 1043 1062 1039 1063 0.94

Sequence Information

Coding Sequence
ATGGAGCAGATCCCACCACCCAAGGAGGTGAAGATCCTCGAGACTGCCGAGGATATCCAGGAGAGACGTGAGCAGGTGCTGAACCGCTATGAAGACTTCAAGCAGGAAGCCCGCGCTAAGCGTGAGAAGCTCGAAGATTCACGTCGCTTCCAGTACTTCAAGCGTGATGCCGACGAGCTCGAGTCGTGGATCCAGGAGAAGCTgcaggcggccagcgatgagaGCTACAAAGACCCCACCAACTTGCAGGCCAAGATCCAAAAGCACCAGGCTTTCGAAGCCGAGGTGGCGGCCCACTCCAACGCCATCGTGGTGCTGGACAACACCGGCAGCGAAATGATCTCCGCTGGTCACTTTGCCTCGGAAACCATCCGCAGGCGCCTGGAAGAGCTGCACAGACTCTGGGAGCTGCTGCTCTCCCGTTTGGCAGAGAAGGGCATGAAGCTGCAGCAGGCGCTCGTGTTGGTGCAGTTCTTGAGGCACTGCGATGAGGTCATGTTCTGGATTCATGACAAGGAAACGTTCGTATGCGCCGACGAGTTCGGCTCGGACCTGGAGCACGTGGAGGTGCTCCAGCGCAAGTTCGACGAGTTCCAGAAGGACATGGCTGCGCAGGAGTACCGCGTCACCGAGGTCAACCAGTTGGCCGAGCGCCTCGTGCTCGAAGGACACCCCGAGAGAGAGACCATCGTTAAAAGGAAGGATGAGCTGAACGAGGCATGGCAGCGTCTCCGCCAGATGGCTCTCATGCGACAGGAGCGCTTGTTCGGCGCGCACGAGATCCAGCGGTTCAACCGTGACGCTGACGAGACCATCGCTTGGATCTCGGAGAAGGATGTCGTATTGGGATCCGATGACTATGGACGGGACCTCGCCACTGTGCAGACCCTTCAGCGCAAGCACGAGGGCGTGGAGCGCGACCTGGCGGCGCTGGAGGACAAGGTGTCGACGCTCAACGGCGAGGCCGAGCGCCTGGCCGCCATCCACGCCGACCACGCGCCCGCCATACACTCCAAGCGCGACGAGATCACGCTGGCCTGGCAGAAGCTCGTGCAGAAGGCTAAGCACGCAAATTTAGTTAAAATGACTATATGGAGACCTTCGTTGTGTAACATGGGATCGGAACGTCCGCAGGAGCGCCGCTCGGAGCTGGAGTCGTCGCACGCGCTGCACCGGTTCCTGGCGGACTACCGCGACCTGGTGTCGTGGCTCAGCGACATGCGCGCGCTCATCGCCGCCATCGACCTCGCCAAGGACGTGCCCGGCGCCGAGGCGCTGCTCGAGAAGCACCAGGAGCACAAGGGCGAGATGGACGCCCGCTCAGACGTGATCCACGCGTGCGCGGGCGCGGGGCAGGCGCTGGTGGAGGGCGGCCACCGCGCGGCAGGCGAGGTGGCGGGCGCGCTGGACGCGCTGCAGCGCGAGTCCTCCGCGCTGCAGCAGCTGTGGGAGCAGCGCCGCGTGCTGTACCTGCAGTGCATGGACCTGCAGCTCTTCTACCGCGACACCGAGCAGGCCGACGCCTGGATGCACAAGCAGGAGGTACGTCCCACTCGTTGTACTATCTATCGTGATCCACGCTGGTGGAGGGCGGGCGAGGTGGCGGGCGCGCTGGACGCGCTGCAGCGCGAGTCCTCCGCGCTGCAGCAGCTGTGGGAGCAGCGCCGCGTGCTGTACCTGCAGTGCATGGACCTGCAGCTCTTCTACCGCGACACCGAGCAGGCCGACGCCTGGATGCACAAGCAGGAGGTACGTCCCACTCGTTGTACTATCTATCGTGATCCACGCTGGTGGAGGGCGGGCGAGGTGGCGGGCGCGCTGGACGCGCTGCAGCGCGAGTCCTCCGCGCTGCAGCAGCTGTGGGAGCAGCGCCGCGTGCTGTACCTGCAGTGCATGGACCTGCAGCTCATCTACCGCGACACCGAGCAGGCCGACGCCTGGATGCACAAGCAGGAGGTACGTCCCACTCGTTGTACTATCTATCGTGATCCACGCTGGTGGAGGGCGGGCGAGGTGGCGGGCGCGCTGGACGCGCTGCAGCGCGAGTCCTCCGCGCTGCAGCAGCTGTGGGAGCAGCGCCGCGTGCTGTACCTGCAGTGCATGGACCTGCAGCTCTTCTACCGCGACACCGAGCAGGCCGACGCCTGGATGCACAAGCAGGAGGTACGTCCCACTCGTTGTACTATCTATCGTGATCCACGCTGGTGGAGGGCGGGCGAGGTGGCGGGCGCGCTGGACGCGCTGCAGCGCGAGTCCTCCGCGCTGCAGCAGCTGTGGGAGCAGCGCCGCGTGCTGTACCTGCAGTGCATGGACCTGCAGCTCTTCTACCGCGACACCGAGCAGGCCGACGCCTGGATGCACAAGCAGGAGGTACGTCCCACTCGTTGTACTATCTATCGTGATCCACGCTGGTGGAGGGCGGGCGAGGTGGCGGGCGCGCTGGACGCGCTGCAGCGTGAGTCCTCCGCGCTGCAGCAGCTGTGGGAGCAGCGCCGCGTGCTGTACCTGCAGTGCATGGACCTGCAGCTCTTCTACCGCGACACCGAGCAGGCCGACGCCTGGATGCACAAGCAGGAGGTACGTCCCACTCGTTGTACTATCTATCGTGATCCACGCTGGTGGAGGGCGGGCGAGGTGGCGGGCGCGCTGGACGCGCTGCAGCGCGAGTCCTCCGCGCTGCAGCAGCTGTGGGAGCAGCGCCGCGTGCTGTACCTGCAGTGCATGGACCTGCAGCTCTTCTACCGCGACACCGAGCAGGCCGACGCCTGGATGCACAAGCAGGAGGTACGTCCCACTCGTTGTACTATCTATCGTGATCCACGCTGGTGGAGGGCGGGCGAGGTGGCGGGCGCGCTGGACGCGCTGCAGCGCGAGTCCTCCGCGCTGCAGCAGCTGTGGGAGCAGCGCCGCGTGCTGTACCTGCAGTGCATGGACCTGCAGCTCTTCTACCGCGACACCGAGCAGGCCGACGCCTGGATGCACAAGCAGGAGGTACGTCCCACTCGTTGTACTATCTATCGTGATCCACGCTGGTGGAGGGCGGGCGAGGTGGCGGGCGCGCTGGACGCGCTGCAGCGCGAGTCCTCCGCGCTGCAGCAGCTGTGGGAGCAGCGCCGCGTGCTGTACCTGCAGTGCATGGACCTGCAGCTCTTCTACCGCGACACCGAGCAGGCCGACGCCTGGATGCACAAGCAGGAGGTACGTCCCACTCGTTGTACTATCTATCGTGATCCACGCTGGTGGAGGGCGGGCGAGGTGGCGGGCGCGCTGGACGCGCTGCAGCGCGAGTCCTCCGCGCTGCAGCAGCTGTGGGAGCAGCGCCTCATCTGA
Protein Sequence
MEQIPPPKEVKILETAEDIQERREQVLNRYEDFKQEARAKREKLEDSRRFQYFKRDADELESWIQEKLQAASDESYKDPTNLQAKIQKHQAFEAEVAAHSNAIVVLDNTGSEMISAGHFASETIRRRLEELHRLWELLLSRLAEKGMKLQQALVLVQFLRHCDEVMFWIHDKETFVCADEFGSDLEHVEVLQRKFDEFQKDMAAQEYRVTEVNQLAERLVLEGHPERETIVKRKDELNEAWQRLRQMALMRQERLFGAHEIQRFNRDADETIAWISEKDVVLGSDDYGRDLATVQTLQRKHEGVERDLAALEDKVSTLNGEAERLAAIHADHAPAIHSKRDEITLAWQKLVQKAKHANLVKMTIWRPSLCNMGSERPQERRSELESSHALHRFLADYRDLVSWLSDMRALIAAIDLAKDVPGAEALLEKHQEHKGEMDARSDVIHACAGAGQALVEGGHRAAGEVAGALDALQRESSALQQLWEQRRVLYLQCMDLQLFYRDTEQADAWMHKQEVRPTRCTIYRDPRWWRAGEVAGALDALQRESSALQQLWEQRRVLYLQCMDLQLFYRDTEQADAWMHKQEVRPTRCTIYRDPRWWRAGEVAGALDALQRESSALQQLWEQRRVLYLQCMDLQLIYRDTEQADAWMHKQEVRPTRCTIYRDPRWWRAGEVAGALDALQRESSALQQLWEQRRVLYLQCMDLQLFYRDTEQADAWMHKQEVRPTRCTIYRDPRWWRAGEVAGALDALQRESSALQQLWEQRRVLYLQCMDLQLFYRDTEQADAWMHKQEVRPTRCTIYRDPRWWRAGEVAGALDALQRESSALQQLWEQRRVLYLQCMDLQLFYRDTEQADAWMHKQEVRPTRCTIYRDPRWWRAGEVAGALDALQRESSALQQLWEQRRVLYLQCMDLQLFYRDTEQADAWMHKQEVRPTRCTIYRDPRWWRAGEVAGALDALQRESSALQQLWEQRRVLYLQCMDLQLFYRDTEQADAWMHKQEVRPTRCTIYRDPRWWRAGEVAGALDALQRESSALQQLWEQRRVLYLQCMDLQLFYRDTEQADAWMHKQEVRPTRCTIYRDPRWWRAGEVAGALDALQRESSALQQLWEQRLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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