Basic Information

Gene Symbol
pnr
Assembly
GCA_947037095.2
Location
OX344845.2:25232110-25235925[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.4e-17 4.3e-13 49.6 3.3 1 35 431 464 431 465 0.97
2 2 6e-18 3.1e-14 53.2 7.5 1 35 492 525 492 526 0.97

Sequence Information

Coding Sequence
ATGGAGAACGTGTCACAGATGGAGCCGCGCGAGGTGGACGTGGCGGCCGAGGCGCTGCAGCTCGTCAAGAACGAAGAGCGCTCGGCCGACCCCCCGCCATCCGCGCCCCCCGCGCATTCCGCGCCGCCCTCCCCCCCTCACGCCGCCTCCGTCATCACGACGCGGCGCCTCGTGCGCACCATCACCGCCGCCGGACACATCACCACGGACGAGGAGCTGGCGCCCGACGACGGCGTCAAGGACGAGCCGCCCGAGCAGCCGCCGCTCGACTCCGACCAGCACCAGCTGCAGTACGCGCCGCCCAAGATGGAGGACGCTGAGCGCGACGCGCACCAGCACTACGAGGACGAGCGCCTGCGCGCCGACGCCGAGGCCGCGCGCTACCTGGCCTTCAAGCAGGAGAGTTACCGGCTCGGCTCGCCCGCCCCCGACAAGCGCATCCAGCCCCAGTACGCCCGCCCTCCCCAGCGACCGCCATTCCCGCGGTCGCTGGCGCTGCGCTACGGCGCCCCGCACCACGTCATAGTGGCCCAGGAGGGCGAGCAGGACGAATCGGCGTCGGACGCGTTCCTCGCGCACAAAGAGAAGCCCGAGCAGCTCCAGTACGCGAGCGAGGCGGCGCCGGACGGCCGCCAGTACGCGATGAGTGAGCAGGCGGCCAACACGGCGCTGGAGATGATCCAGACGACGGCACTCAACAACCAGCAGGCCGCGGGCGTCGCGTACCAGCAGGTGAAGTACGAGACGCGGGCGGAGGGCGAGGCGCGCGCCGGCACGTACGCCAGCCTGCAGCCCGTGACGTCGGTGCACGGCGGGTACTACGCCGGCCAGAGCCCGCAGTACGCCGGCGGAGCGTACGGCGCGTACGGCGCCGGCGGTAAGGAGCTGCTGACGCTGtacggcggcgcgcgcggcgacGACTCGCCACCTTCGCAGCTGCTGTACCGCGGCGACCCCACGCTGTCCTCCTCGTCGCtggcgccgcgcgccgcgcaTGTCGTGTACGGCTCCGTCGTGCCGCAGTCGCAGGCCGTGTACGAGGCGCCGCCCAGCCCCAACTCGCAGCAGGTGACGTTATACACCCACGGCAACACGGTCCAATACAAAGTCGGCGGCGAGCACTACCTGGGGCAGGGCGGGGGCGTGGAGTACGTGCCGGTGTCCGGCTACGAGGGCGGCCTGCTGGTCGAGGGGTACCCCGCTCCTGCGCAGTCGTGGCCTGCACATAATCTACTGCCGATCGATGAAGGTTTCGATCCCAGCATGGCCGGAATGGGCGAGGTGAAAGAGTGCGTGAACTGCGCGGCCGCCACGACGCCGCTGTGGCGACGCGACGGCaccggccactacctgtgcaacgcgTGCGGTCTCTACACCAGGATCAATGGGGTCAACCGACCACCGCTCAAAGGACAGAAGGCGAAACCACAGCAAGCACTGCCCACGAATGGTAACCGTCGCGTGGGCGTGACGTGCGCCAACTGCCGCACCTCCAACACTACGCTGTGGCGGCGGAACAACAACGGCGAGCCGGTCTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAACGTGAATCGGCCGTTGAGCATGAAGAAGGATGGTATACAGACGCGAAAGCGTAAGCCAAAGAGCATGGGCGGCGGACACAGCGGTGTGCCGCGACCTGGAGGTGGACCTCTACAAGTGGAGGCACACTCGCACAAGGTGTTGCCTCCGCTGTACGCGGCGGTGGAGGGCGgcggcgccgcgccgctgcTGCTGCTCCCGCAGCGACACTCGGCCGATATGGTACCAGCGCTAGAGCGCGGCGCGTACCGGCCGCCGTAA
Protein Sequence
MENVSQMEPREVDVAAEALQLVKNEERSADPPPSAPPAHSAPPSPPHAASVITTRRLVRTITAAGHITTDEELAPDDGVKDEPPEQPPLDSDQHQLQYAPPKMEDAERDAHQHYEDERLRADAEAARYLAFKQESYRLGSPAPDKRIQPQYARPPQRPPFPRSLALRYGAPHHVIVAQEGEQDESASDAFLAHKEKPEQLQYASEAAPDGRQYAMSEQAANTALEMIQTTALNNQQAAGVAYQQVKYETRAEGEARAGTYASLQPVTSVHGGYYAGQSPQYAGGAYGAYGAGGKELLTLYGGARGDDSPPSQLLYRGDPTLSSSSLAPRAAHVVYGSVVPQSQAVYEAPPSPNSQQVTLYTHGNTVQYKVGGEHYLGQGGGVEYVPVSGYEGGLLVEGYPAPAQSWPAHNLLPIDEGFDPSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHSGVPRPGGGPLQVEAHSHKVLPPLYAAVEGGGAAPLLLLPQRHSADMVPALERGAYRPP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-