Basic Information

Insect: Nycteola revayana
Gene Symbol: -
Assembly: GCA_947037095.2
Location: OX344842.1:14404179-14415362[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0041 0.39 12.2 5.1 1 23 171 193 171 193 0.98

2 11 2.1e-05 0.0019 19.5 0.3 1 23 199 221 199 221 0.99

3 11 4.4e-05 0.0041 18.4 1.4 1 23 227 250 227 250 0.96

4 11 0.012 1.1 10.8 3.3 1 21 256 276 256 278 0.95

5 11 0.00012 0.011 17.1 2.7 1 23 284 306 284 306 0.99

6 11 2.3e-05 0.0022 19.3 3.3 1 23 312 334 312 334 0.98

7 11 0.0026 0.24 12.9 1.0 1 23 342 365 342 365 0.96

8 11 0.025 2.3 9.8 4.5 2 23 372 393 371 393 0.96

9 11 0.00039 0.036 15.5 2.5 1 23 399 421 399 421 0.98

10 11 5.3e-05 0.005 18.2 4.8 1 23 427 450 427 450 0.95

11 11 1.1e-05 0.001 20.4 4.7 1 23 464 486 464 486 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0041	0.39	12.2	5.1	1	23	171	193	171	193	0.98
2	11	2.1e-05	0.0019	19.5	0.3	1	23	199	221	199	221	0.99
3	11	4.4e-05	0.0041	18.4	1.4	1	23	227	250	227	250	0.96
4	11	0.012	1.1	10.8	3.3	1	21	256	276	256	278	0.95
5	11	0.00012	0.011	17.1	2.7	1	23	284	306	284	306	0.99
6	11	2.3e-05	0.0022	19.3	3.3	1	23	312	334	312	334	0.98
7	11	0.0026	0.24	12.9	1.0	1	23	342	365	342	365	0.96
8	11	0.025	2.3	9.8	4.5	2	23	372	393	371	393	0.96
9	11	0.00039	0.036	15.5	2.5	1	23	399	421	399	421	0.98
10	11	5.3e-05	0.005	18.2	4.8	1	23	427	450	427	450	0.95
11	11	1.1e-05	0.001	20.4	4.7	1	23	464	486	464	486	0.97

Sequence Information

Coding Sequence: ATGCCGCCTCCGGATAAAACGGATAAGGCCAAGCAGGCGCTCCTGGAGTCCTACCTGAACCAGAGCGCTGCTGCTGTTATAGCAGTGAATGGGGATGAAGATGCTGATGCAGAAGTTACGTACTTTGTAGACGACGAGGGCCGGTACTACTACCAGCCGGCTGGAGACTCGCAAAATCTGGTTCCCTTGCCCACTGGAGATGAAAATGCGGCTATAGGACCTGAAGACCCGATGATGACGGATGCCGAGGGTGACAGCTATCAGACCGTGACTCTGGTGCCTTCGCAGTCAGACACCGGAGAGGTCAGCTACGTGCTGGTGGTACAGGAACAAGAAAATAAACCTGTCGTTAACATTGACATCAATATGGCGGAGgaGGACAAAGGCACCTCTGATGTGTACGCCTTCGATGATGACGAAGAGGTAGCGGATCCAGCCACCTCATCGGATGACGAACCTGTAGGGAAGTCGAAGCCCCCCAAACCGAAAGGCAAGCACCCGCGCCAGAACTTCAACTGCAACATGTGCACTTACACCAGTCATAGGCGTTACCTGCTGCTACGGCACATGAAGTCTCACTCGGAGGAGCGTCCGTACAAGTGCAGTGTATGCGAGCGCGGCTTCAAGACCGTGGCTTCCCTGCAGAACCACGTGAACATGCACAACGGAGTCAAGCCACATGTCTGCAAGTACTGCGACAGCCCTTTTACTACATCAGGCGAGCTGGTGAGACATGTGCGCTACAAGCACACGCACGAGAAACCGCACAAGTGTACCGAGTGCGACTACGCCTCCGTCGAGCTATCTAAGCTGCGCCGCCATATCCGTTGTCACACTGGCGAGAGACCCTACCAGTGCCCGCACTGCACGTACGCGTCTCCGGACACGTTCAAGTTGAAGCGACATCTCCGCACCCACACCGGCGAGAAACCGTACAAGTGCGAGAACTGCAACATGTGCTTCACGCAGTCCAACTCGCTCAAGGCGCACAAACTTATTCACAACGTCGCCGACAAGCCTGTATACGCTTGTGAGCTGTGCCCAACGAAATGCGGTCGCAAGACAGATCTGAGGATACACGTGCAGAAACTGCACACGTCCGACAAACCGCTGAAGTGTCGCCGATGTGGCAAGACCTTCCCTGATCGGTATTCGTGCAAAGTGCACAATAAGACCCATGAAGGCGAGAAGTGTTTCAAGTGTGAGCTGTGCCCGTACGCGTCGACCACCATGCGCCATCTCAAGTCTCACATGCTGAAACACACTGACGAGAAACCCTTCTGCTGCGACCAGTGCGACCAGTCCTTTAGgCAGAAGCAGCTGCTCCGTCGTCACCAGAACTTGTACCACAACCCGAACTACGTGCCCAAGCCTCCCAAAGAGAAGTCCCACTCCTGCCACGAGTGCAAGCGCACGTTCGCGCACAAGGGCAATTTGATCCGACACCTGGCGGTTCATGACCCCGATTCGGGCCACCAGGAGAGGGCGCTGGCTCTCAAACTTGGCAGGCAGCGGAAGGTCAAGTTTATAAATGGAAAAATGGTGAAGGATACCCGCAGTCCTAATTCTGGACACAATGCTGGACTGTTGAAGATCGGGGTCGGCAACAATAACCTGAAGCGAGGGGAGTTAGTGACTGTAGGTGATGGTGATGGCCAGCAGTACGTGGTGCTGGAGGTGATCCAGCTGGAGGATGGCACTGAGCAGCAGGTCGCGGTGGTGGCACCTGATTATATCGAGGAAGAGGAGCCAGAAGAaatagaggaagaagaagaggaGGAGGAGGAGGAAGAGGAGGATGAAGATGACGAAATAGAGAGGAGATTCGCTCCCGCCAGGGCTCAGGCACACAGACATATTAAGCTGGAGAAGGACGTAGACACGTGCTTTGGATTTGatGAGGAGGATGAGGAAGAAGGCGAAGAAGACGAATACAACGAGAGAGTTCTTCAACTGGTTTAA
Protein Sequence: MPPPDKTDKAKQALLESYLNQSAAAVIAVNGDEDADAEVTYFVDDEGRYYYQPAGDSQNLVPLPTGDENAAIGPEDPMMTDAEGDSYQTVTLVPSQSDTGEVSYVLVVQEQENKPVVNIDINMAEEDKGTSDVYAFDDDEEVADPATSSDDEPVGKSKPPKPKGKHPRQNFNCNMCTYTSHRRYLLLRHMKSHSEERPYKCSVCERGFKTVASLQNHVNMHNGVKPHVCKYCDSPFTTSGELVRHVRYKHTHEKPHKCTECDYASVELSKLRRHIRCHTGERPYQCPHCTYASPDTFKLKRHLRTHTGEKPYKCENCNMCFTQSNSLKAHKLIHNVADKPVYACELCPTKCGRKTDLRIHVQKLHTSDKPLKCRRCGKTFPDRYSCKVHNKTHEGEKCFKCELCPYASTTMRHLKSHMLKHTDEKPFCCDQCDQSFRQKQLLRRHQNLYHNPNYVPKPPKEKSHSCHECKRTFAHKGNLIRHLAVHDPDSGHQERALALKLGRQRKVKFINGKMVKDTRSPNSGHNAGLLKIGVGNNNLKRGELVTVGDGDGQQYVVLEVIQLEDGTEQQVAVVAPDYIEEEEPEEIEEEEEEEEEEEEDEDDEIERRFAPARAQAHRHIKLEKDVDTCFGFDEEDEEEGEEDEYNERVLQLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01265089;
90% Identity: -
80% Identity: -