Basic Information

Insect: Nycteola revayana
Gene Symbol: -
Assembly: GCA_947037095.2
Location: OX344840.2:22525827-22535006[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 3.3e-07 3.1e-05 25.1 1.5 1 23 456 478 456 478 0.99

2 8 1.1e-05 0.0011 20.3 2.2 1 23 484 506 484 506 0.98

3 8 8.2e-06 0.00076 20.8 0.6 2 23 515 536 515 536 0.98

4 8 7.5e-06 0.0007 20.9 0.9 1 23 542 564 542 564 0.99

5 8 9.6e-08 9e-06 26.8 2.1 1 23 570 592 570 592 0.98

6 8 5.8e-07 5.4e-05 24.4 1.3 1 23 598 620 598 620 0.97

7 8 9.7e-05 0.0091 17.4 7.3 1 23 626 648 626 648 0.97

8 8 7.1e-05 0.0066 17.8 0.9 1 22 654 675 654 675 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	3.3e-07	3.1e-05	25.1	1.5	1	23	456	478	456	478	0.99
2	8	1.1e-05	0.0011	20.3	2.2	1	23	484	506	484	506	0.98
3	8	8.2e-06	0.00076	20.8	0.6	2	23	515	536	515	536	0.98
4	8	7.5e-06	0.0007	20.9	0.9	1	23	542	564	542	564	0.99
5	8	9.6e-08	9e-06	26.8	2.1	1	23	570	592	570	592	0.98
6	8	5.8e-07	5.4e-05	24.4	1.3	1	23	598	620	598	620	0.97
7	8	9.7e-05	0.0091	17.4	7.3	1	23	626	648	626	648	0.97
8	8	7.1e-05	0.0066	17.8	0.9	1	22	654	675	654	675	0.95

Sequence Information

Coding Sequence: ATGTGTGAATGGCTGTGTTACCGGGAGTGGTGCGATGTTCAGCTGGTGTGTGGTGGCCGAGCCTTCAGCGCACACCGTGCCGTGCTTGCCAGTGTCAGCACCTTCCTCAGACGACTACTCCTTTCGTGCCCAACGGATGAATCTCCAACATTTATTGTTCTACCTGATTATGATCTTGAAGCTATGTCATCCGttctttattacatttataatggCGAAGTTATGGTAAAAAGAGAAAAGATAGAAAAGTTTTTAGATATAATCAAAGCGATGCAAATCTTTATCGATAGCCAATACGTGCCAGAAATTgcccaaaaatataatttagactTGCATTTGGACCCTAAAACGGATATAGTATCCAAACGCACATTTAAATTAGAATTCAGCGGTTCTAGAGATCAAAGATACGTTAATTTAAAGAAAGGCAATGAAATTCAGTATTCAGTAAGCAACTCGGATTGTGAAGATAAGCTAGTACGTACACTGAATCCAAGTAAAGAGCCTGAGTCTTTAGGAGATCTGAAATCGCTATATGAAGACCGACAAAGGAATTATTTTCTACGTGATTTATATATCGAGACATATCCTCGAAACGGTAATGTTAACGGTCTGACGGCAGGCGTGCTGGCAATATCAAATGAATGCTATCGTACTCCGGGATCTATGTCTCTCTTGACGAATGCAAATGGCAAACATCTTAGCGACGACGACGCACTCAACGTGACAGCCTCTTACTCGAATAAAGTATTAAGCCGACATGACGTAAAAAGTTACAAGATCGATGAAGACGAAACGACCAAAAGTAATGCTGCCTCTTGTCTCAGCATTCAAACAGTAGAGAAAAGTCGAATAAGTAAATCAATACATGAAACTCAACTTCTAATACAACCTAAGAATACATTGATGAACAAAGTTCAAACGCCGTCGTCAAATAGATTATTTCAGTTGGGATTTCGGGATCCAATCTTGCCTCAATTTTATGATCCTTATGTTGATTATAGAATATCCTCGTCAATGTATAATTCAATGAAGTCATTAGAAGAAATGGGAAATAAATCCGCTTCGTTGGGTAATACACTTTTAGGAGATAATAGAAAGGATACTAACCAATCATCTAGAGTTAccattttaaatcatgttttggAGAGTCCGTGGTGCCCTCGTATCCCCAATAATTATAAACCATTCCGAAGAAAAGTCGAACCAGTAATATCGTCCGATCAAAAGaacAACGAGAGAAGTCATAATGATGACAATAACAATATCGATGAGTCTTGTATAAAAGTGGATAAAACTTTAGTTGTGAGTGAGAAGAAGGAATTAACGGAACTATCAAATTTATCGGACTGTGTCAGTGATGAATTCAAATGTAATGTTTGCAAtcagATTTTCACTAGCAACGGGTCACTCACAACTCACATGCGGCGGCACTCGAGTACTGCTCGCTATTCGTGTGGCGAATGTACTAAGACGTTCTCTCAACTCAGAAACTTCAAGTACCATATGTCCATACACAAAGGAACCAAGGAATTCGCAGCAACATGCACTGTGTGCGGGAAATATTTCAACGACAGAGGATATCTTAGCAGTCACATGAAAATTCATAGGAACCGTAAGGAATACAAATGTACGCAATGCCCCAAGTCATTCAACCAACGCGTCGCCTACAACATGCACGTGCGCATACACACAGGTGTGAAACCACACGTGTGCGAGGAGTGCGGCAAAGCGTTTTCCCGTAAGATGCTGCTGAAGCAACACCAGCGCACGCACTCGGGCGAGCGGCCGTACGCCTGCCCTCATTGCGACAAGCGGTTCGCGGACCGCTCCAACATGACGCTGCACTTGAGACTACATACTGGTGTGAAACCGTTCTCCTGCACGCTATGTCCGAAGTCGTTCACTAAGAAGCATCATTTGAAGTCACACCTGAACTTCCACACTGGGTCGAAGCCGTACTCGTGCCCGCGCTGCAAACTCGCGTTCACACAATCCTCAAACATGAGGACACATTTGAAGAAGTGTAGAGCACCTATAGCGGAAAATGAAAACTGA
Protein Sequence: MCEWLCYREWCDVQLVCGGRAFSAHRAVLASVSTFLRRLLLSCPTDESPTFIVLPDYDLEAMSSVLYYIYNGEVMVKREKIEKFLDIIKAMQIFIDSQYVPEIAQKYNLDLHLDPKTDIVSKRTFKLEFSGSRDQRYVNLKKGNEIQYSVSNSDCEDKLVRTLNPSKEPESLGDLKSLYEDRQRNYFLRDLYIETYPRNGNVNGLTAGVLAISNECYRTPGSMSLLTNANGKHLSDDDALNVTASYSNKVLSRHDVKSYKIDEDETTKSNAASCLSIQTVEKSRISKSIHETQLLIQPKNTLMNKVQTPSSNRLFQLGFRDPILPQFYDPYVDYRISSSMYNSMKSLEEMGNKSASLGNTLLGDNRKDTNQSSRVTILNHVLESPWCPRIPNNYKPFRRKVEPVISSDQKNNERSHNDDNNNIDESCIKVDKTLVVSEKKELTELSNLSDCVSDEFKCNVCNQIFTSNGSLTTHMRRHSSTARYSCGECTKTFSQLRNFKYHMSIHKGTKEFAATCTVCGKYFNDRGYLSSHMKIHRNRKEYKCTQCPKSFNQRVAYNMHVRIHTGVKPHVCEECGKAFSRKMLLKQHQRTHSGERPYACPHCDKRFADRSNMTLHLRLHTGVKPFSCTLCPKSFTKKHHLKSHLNFHTGSKPYSCPRCKLAFTQSSNMRTHLKKCRAPIAENEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01076694;
90% Identity: iTF_01076694;
80% Identity: iTF_01076694;