Nrev031380.2
Basic Information
- Insect
- Nycteola revayana
- Gene Symbol
- -
- Assembly
- GCA_947037095.2
- Location
- OX344862.2:16119598-16129598[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.071 6.6 8.4 1.5 3 23 703 724 702 724 0.96 2 23 0.41 39 5.9 0.3 1 22 1109 1130 1109 1130 0.95 3 23 9.1 8.5e+02 1.7 0.4 1 22 1172 1193 1172 1195 0.82 4 23 0.00069 0.064 14.7 1.1 3 22 1206 1225 1204 1225 0.94 5 23 0.11 10 7.8 0.6 2 23 1233 1255 1232 1255 0.90 6 23 0.0095 0.89 11.1 0.3 3 23 1276 1297 1274 1297 0.96 7 23 0.0022 0.21 13.1 1.7 1 23 1303 1326 1303 1326 0.95 8 23 0.15 14 7.3 0.0 1 23 1352 1375 1352 1375 0.90 9 23 0.0067 0.62 11.6 3.5 1 23 1380 1402 1380 1402 0.97 10 23 0.052 4.9 8.8 0.1 1 23 1408 1431 1408 1431 0.95 11 23 0.0028 0.26 12.8 1.3 1 23 1444 1466 1444 1466 0.97 12 23 0.00022 0.02 16.3 1.8 1 23 1516 1539 1516 1539 0.97 13 23 0.0058 0.54 11.8 1.7 1 23 1599 1622 1599 1622 0.96 14 23 0.0031 0.29 12.6 2.2 2 23 1647 1669 1646 1669 0.95 15 23 0.11 9.9 7.8 0.1 2 23 1675 1697 1674 1697 0.93 16 23 0.012 1.1 10.8 0.2 1 21 1738 1758 1738 1759 0.95 17 23 0.00051 0.048 15.1 1.0 1 23 1769 1791 1769 1791 0.93 18 23 0.00014 0.013 16.9 0.3 2 23 1883 1905 1883 1905 0.93 19 23 4.8e-07 4.5e-05 24.6 1.4 3 23 1912 1932 1911 1932 0.98 20 23 0.058 5.4 8.6 0.2 3 23 1953 1973 1951 1974 0.95 21 23 0.22 21 6.8 0.0 1 23 1996 2018 1996 2018 0.97 22 23 0.033 3.1 9.4 0.6 1 23 2024 2047 2024 2047 0.95 23 23 0.00031 0.029 15.8 0.4 1 23 2055 2078 2055 2078 0.96
Sequence Information
- Coding Sequence
- ATGAGTGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACAGCCgatttttcctaccaccagttcggATGACTCGGAACCTCCCGTCCTCGCCTCGAAAATCAAGGATTGCGTGTCTGTTCAGATAAAGGAAGATGACGAGCTTCCCACAAATGTCTGCAGGAAATGTGTGGACAATGTCAATAACTggcacatatttaaaaatgtatgtgaAAGGACACAAAACAAACTACAGTCTCTGATTCATAAAGATGGCAGCCAACTAGAAGAGGTGAAAATAAAAAGTGAGCCATTGTCTGATGGGGCATACTATGATGATGGAGTGGTTATTGATGGGTCATATCCTGACAATGAGAACACAACATCATCAAATAAGATGCAGCCTGAAGGCCCCCCAATCTTGGCTTCACTGGGACTCACACCAAGGAGTGATAAGAAAAATGTGGATCCTCGAATGGATTGGCATCGAGTTCATGCAATATTGGACATGGTTCAAGACAGTGATATTATTGATTCCCTTCAATCAACAGAGGAGAGTGATGTCTTGACACACTCCGACCATGATTCTGACTCAGAGATTGAACTCCAAGCTGAAATAGAGGACTGTTATGTTGATTATAGGAATGGATAcacatgtaaaaataaacaaaaaatatccaaACATCCACTATCTTCTACAGCTGACTATAATGTAAAAGTGAAAGAAGTCCAAAAGCTCAGAAAACATAAATCAATTCCACATAAAACTTGTTCTCAACCAAAAAACGCATGGCAGTTGTTATTCAGTGATGACCTACTAGAATTGATTGTGACATCTACCAAtggaaatattataaataatggcaATGGAGCAGAGCCGACGAGCGTCAGCGAAATCAAAACGCTTATCggtattttgtatttacacGGCATAATGCGGCCGACGCATCAGAAATGCGGTGACCTTTGGAACATTGCGACTGGCATGCCATGCGTAAAGAAGTCTATGAAACATGAAAGGTTTAAATTTCTTTTACAAAATTTGAGttttgatgaagatgatgatagcATTATTCAGTTTGATACAATGAAACGAATAcgtaaaatttttgaaatttttgcCATGAATTGCAGAATGGCTCATGACATTGAAAATATTGCAGTAATCGATGAAAtaattgtacctatatatgGACCTTGTCCATTTCGTTATGACATTAATAAGAAACCATTAAAACGTGGAATGAAAATGGTGTTGCTAGTTGATTCATCCACCTTCTATGTGAGCAATTTAGATGTTATAACGGACCCTTACTTTGCTGCTGAGGATATAACAAAAAAGTTAGTTCAGCATCTAGCCGGATCGAACAAGACTATTGTAATGGACAGTTGGTTTACTTCAATGTCTCTAATTCAGTACTTGAAAAACGAGTACCAGTTATACAGTATTGCTGCATTGAATTCAAACAGTGAGTGGATTCCTCCAATATTTTTGTCTCAGTTCAGAAAATCACAAACATTTATGTCCGGATTTATTGATGACAATCTTACACTTACATCTTCTGTAAATTCGGACTCAAAGGCAGTGAATGTTTTGACTAATGAGCCTAGGTACTATAGAAAGGGACACATGAACCAGACTACCGTGGTGCCAGTATACAAGAAACATCAGTCAGCCGTAGAAGTAGTTGATGTACTAATGCACTATTACACCACTATGCAACACACTAATGACTGGACACTGTCATTATGTTTTACTTTATTGAATATAGCTTCTGTGAATGCACAAGTCTTGTGGAGCTCTCAGTCAAACACTAGAGTTGTTCAGCGGCGTTTATTCATACGCGACTTGGCTTTAAGTCTGTTAGATAATGAGAATCAACTCCCTGCGTCACCTGAGGCTGAAACCAAGAAGATGAAGGTGTCATTGTTAGGAGATGGAGTGGAGAGTGAGAAAGATGAGGAAGAAGACGACGATGACGACATGAATGAACCTGTCCAAATGATGCCTAAGATGCCCAACATGCCGGAGGTTTCTATCACGGTCATGCGACCCACTGGCGAGACGCTACAGTCGCGTCAGGGCATACACCAGCTTGCTTCTAAAGACTGTCTCGTGTGTAGCCGCACCTACAGATACTCGCACAATGCCCGCCGACACGAACTCACTGCACATAGTTTCGACAGGTACACCAACAAAATTACTCCCAACAAAAAGTCACTCGCACATCTGCAGCCCAAACTGAGACCTAACCCGTTCAATCCTAAAGCACGGTTGATGCCGAATCCTATTAGTCATAAGATGCAATTTATGAACAAATCTATACCCGCCAAAATAGTACCCATGAATAAAATGATCAATCCTCAGAAGCCGATAcctattaaacaattaaaaccGCAAAATAATTTACCGTATCCGCTCCGCATTAAAGCTCTCAAAGATTTACAAATTAAGAAAAAGGAACCGCAGATTTTAAAAACCTTGTTGACCACCAAGCCTGAAGTTTTAGTTTctgaacctgaaatattaaactCTGGTCCCGAAAGCCCTGAAACATTAATTTCTGAACCGGAAATTGCTTCATTCCAAGTAGAAACCATATTATCGGAGCCGGACGCTGACGCGTATGATCCTAATCAATGCGAAGACGAAGGTGACAGTGAAATGCATAATAATCAAAGTCAAAACTATGATACTCTCGACATGGATTCCGATAATGAGATTGAGATCGCTAGACAAGGCGATGAGCAAGAAGGAGAAGAGCAAATTGATGGAGAAGAACATATGGAAAATGACGATGAAAATAATGTGGATGAACAACGTAGTGAAAACGAAAAAGATGGTGATGATACCATAGAGAGTCAAGACAATATGGAAGGAGATCTCGAAATTAAATCCGAACGGCAAAATAAGGGAGATGAGGAAGTGGACGAAGGTCAAGATGAAGGTAACCAACATGAAGATATGGAAACGAATCATGATGaaaacgatgatgatgatgatgacgataatatGCCTTTAGCGCCAGTTGTTGAAATAAATGAGGATTTGCAAGTAAACTCATTTAACAGCGAGAATAATGAAGAATACGAAGAAGAAATGGATGAAACTGTCGACCCGAATGAAACTATCGAAGATGAAGAACAAGTTAGAGAACTCGACCCTGACAAAACTTATGTCACAAAAACTCAAAAAGAATTCATTGATAAATATCGTGACATTATTCAACAAATTAACACTAAACGTTGTCTTTGTTGTGATAGAGAACATCCGCGTAGAAAAGCGGTCATACAGCACTTGcaaaaaaatggacacaaagTTCCGAAACACACGTGTTACAATTGTGTTGTTACGTTCGGTCACATCGGCGCTTTGCTAAGCCATATGAGGTCAAACTCGTGCACCAATTTATGGAAGATTATATACGATGAAAATGGTATTCCAGATGACCAAGTTTTGGAAGATGAGCCCAAGGAGGTTAAAGTACAATACAAGGATATATTCAACGCTAGATCATACGCCTGTAAGTTGTGCCCAGCTAAGTTCCAGCTGAAACAATTtataatgaaacatgttttGGACACACATGAAGATGGTCAATCTAGAGTGCCACTTGCATGCGTTCATTGCCGTGCAAGATTCAAGGACAAGAGCTTATTAAAGAAACACATACGAAAAGGCGACTGTACCGTTTACATCTCATGTGACTTGTGTACAGAAAAGTTCAATAATTTACAGCATTTTAATGATCATGCTTTAGCTGTTCACGCCGGCAGTTTTGATCCGAATGACAATCCAAACAAATGTGTTGACGGTCGCCCTACTGATTGCCCCTTGTGTGGAAAGAAAAACAGTACCTACCAGAATTTAGTGAAGCATTTGAAGATAATCCACAATGAGGAAACGCCGCATTACTGCCAACACTGCGACGCTAAATACGAACAAGCCGGCGATCTGAATAAACACATTTACATGGAGCATTCCGATAGGACCTTGGGCATGTCCAATGCCGAACCAGACATGTCTATTGTGAAGGAGGAAGCTGAGGAATATCACTATTCGTGTACGGAATGTAATGCTATATTCGAAACTGTCGATGCGTGGACCGACCACCAAGTCGCTGAACACAACCAGGTCGCCCATCACTGTGATCAATGTGACAAAAAGTTCCTGCGTCCTTCGGAGCTTGCCGAACATAAGAATACTCACTTGAGGGTTAAGTTCTACCCCTGTAGTATATGTGCCAACTCATATAGCACCCCGCAGAAACTTTCGGAACACGTACAGCAGGTTCATCCCGGCATCGGTGCTGTAGCGGCCGGCGATAATGAATTCTTCTGCGATATTTGCATCAGATCATTCAAAAGCCGTCAAGCATACTCAAACCATATGCGCATCCATGCTAAGGTACCTACCACTAATAGGAAACCTGGTGAAGTCGGAAAAGGATTTCCTCCACAAATTATTGGTAAACCTATCAAACAATTCCCCATGGTTCAGCCTGGATTTGTGGCGTTTAAGCCTAATTATAATATTCCCAATGCACCTTATTCTTGTGATATTTGTGGAAAAGGTTTCATGcacaagaaaaatatatggaagcacaaaaaggtgttgcaTGCTGATATTTTGAATGATAGAAATGATAGCGAAGAAAATACTATGCAAGCGTCTACTGAAGAGGAAGAGTTCAATCCTGATGAAAATGGCGCCATACTCTCGACGCCtcaatttaatagttttaactTTACTAATTTAGCAAATAATTCTCAGCCAGCTCAACAAGAAGCTATGCCGTACTCATGTGAATTATGTTTCAAACGATTCCCGCTTAGAACTAGTTTGTGGAAACATAAACGCGCTAAACATGGAATTACGAATGCCGGCGGTAATTCTGAAACACAGACGCAATCGGGATCAACTGAAAGTAGTAGTAGATCCAGTTGCACAATTTGCAGAATAACATTCACCGACAAGAAATCATACTATCGCCATAGGAAAAATGTTCACAAGTCGACCGTTCAAATGTGTAAAATATGCGGAAAGCCCCTCAATTCTACCCTGGAGTTGTATGAACATTTGAAGGCGGCGCACGCTAGAGAATTACTCGGCTATAATGCAAACCAAGGGTCCATTAAGCAGGACCCTCAGGATGATCCTGATTATGAAAACGATAATGAAGCTACCGATCCTAGCGTCGACTATCAAGCACGATATCCATGCGATACTTGCGGTAAGCAATTTGTCGGACTATTAGCTCTGCAAAACCATCAATGCATTAATCAAGTTCAGTCACAACCGCAAACATTTGACTGTGAGATTTGTCACAAGAGTTATACTTCGATATCAGCATTGAAAAGTCACCGCGGTTGGCACTTGCGTTCACCGGACGGTAAGGCGGCTGCCAATAATACCGGCCTCTGGATGCCACAACACAAAGTCACTAGCAAGATAAGTAAACATGAGGTTATCGATGCTTCACAACTTGCTAAGGTGACGCACACTACGATTTCGAGCCCTACCGCGGCCGTAGTCGCCAAACGAAGGTTACCACCCGAAGTGGAAGTGACTGTCGTCaatccaaacaaaaaaatgcGTTCCGACGATTCTGTCGAATTGGAACAAAATTCTGGTTCATTGGAAGATAGATACTGCACTATATGCGACAAAGAATTTACAAAACGGGCGGCGTATCAACGCCACATGGACGAAGTACATCAACCTAATTCCGTATTCTGTCCCGTGTGCGATAAGAGTTTCACTCGAAAGTCTACACTACTCATTCACATGAAAAAGCATTACGAAGGTGGAGAAGGTAGTTCGAGTGTGACGGAACAAAATGACGAAGACCAATATGGGTGTGATTTGTGTGGTGCACAGTATGACAACGAACAAGCGCTTAGGGCGCATCGAATAAGACACCACGGCGACGAATCCGGAGAAGAATCTGAAGATGACGGCAACGTTCCAGTCGCGCCTCCCGGAGAATTTACTTGTGCACAATGCGGGGACGGGGTCGCCACTCCCCGAGACTTGATTGCTCATCGGACGATGCACGCGACTCCCACCAAATTTTTCTGTAACATTTGCAAGGTTTACTTCGCTCGGGCACTAGACTTGTCGTCTCACACGCGCGCGCGGCACGCCGACAACGAGAAAGTGTTCTTCCCTTGTGCCATGTGCGACAGGTTCTACATGAACAAGAAGAGCTTACAGCGGCACATCGAAATGGCTCATTGA
- Protein Sequence
- MSVNYDRVCRLCLSSRGELQPIFPTTSSDDSEPPVLASKIKDCVSVQIKEDDELPTNVCRKCVDNVNNWHIFKNVCERTQNKLQSLIHKDGSQLEEVKIKSEPLSDGAYYDDGVVIDGSYPDNENTTSSNKMQPEGPPILASLGLTPRSDKKNVDPRMDWHRVHAILDMVQDSDIIDSLQSTEESDVLTHSDHDSDSEIELQAEIEDCYVDYRNGYTCKNKQKISKHPLSSTADYNVKVKEVQKLRKHKSIPHKTCSQPKNAWQLLFSDDLLELIVTSTNGNIINNGNGAEPTSVSEIKTLIGILYLHGIMRPTHQKCGDLWNIATGMPCVKKSMKHERFKFLLQNLSFDEDDDSIIQFDTMKRIRKIFEIFAMNCRMAHDIENIAVIDEIIVPIYGPCPFRYDINKKPLKRGMKMVLLVDSSTFYVSNLDVITDPYFAAEDITKKLVQHLAGSNKTIVMDSWFTSMSLIQYLKNEYQLYSIAALNSNSEWIPPIFLSQFRKSQTFMSGFIDDNLTLTSSVNSDSKAVNVLTNEPRYYRKGHMNQTTVVPVYKKHQSAVEVVDVLMHYYTTMQHTNDWTLSLCFTLLNIASVNAQVLWSSQSNTRVVQRRLFIRDLALSLLDNENQLPASPEAETKKMKVSLLGDGVESEKDEEEDDDDDMNEPVQMMPKMPNMPEVSITVMRPTGETLQSRQGIHQLASKDCLVCSRTYRYSHNARRHELTAHSFDRYTNKITPNKKSLAHLQPKLRPNPFNPKARLMPNPISHKMQFMNKSIPAKIVPMNKMINPQKPIPIKQLKPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEVLVSEPEILNSGPESPETLISEPEIASFQVETILSEPDADAYDPNQCEDEGDSEMHNNQSQNYDTLDMDSDNEIEIARQGDEQEGEEQIDGEEHMENDDENNVDEQRSENEKDGDDTIESQDNMEGDLEIKSERQNKGDEEVDEGQDEGNQHEDMETNHDENDDDDDDDNMPLAPVVEINEDLQVNSFNSENNEEYEEEMDETVDPNETIEDEEQVRELDPDKTYVTKTQKEFIDKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTNLWKIIYDENGIPDDQVLEDEPKEVKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDTHEDGQSRVPLACVHCRARFKDKSLLKKHIRKGDCTVYISCDLCTEKFNNLQHFNDHALAVHAGSFDPNDNPNKCVDGRPTDCPLCGKKNSTYQNLVKHLKIIHNEETPHYCQHCDAKYEQAGDLNKHIYMEHSDRTLGMSNAEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSICANSYSTPQKLSEHVQQVHPGIGAVAAGDNEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEVGKGFPPQIIGKPIKQFPMVQPGFVAFKPNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILNDRNDSEENTMQASTEEEEFNPDENGAILSTPQFNSFNFTNLANNSQPAQQEAMPYSCELCFKRFPLRTSLWKHKRAKHGITNAGGNSETQTQSGSTESSSRSSCTICRITFTDKKSYYRHRKNVHKSTVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSIKQDPQDDPDYENDNEATDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQVQSQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNTGLWMPQHKVTSKISKHEVIDASQLAKVTHTTISSPTAAVVAKRRLPPEVEVTVVNPNKKMRSDDSVELEQNSGSLEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYEGGEGSSSVTEQNDEDQYGCDLCGAQYDNEQALRAHRIRHHGDESGEESEDDGNVPVAPPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00851013;
- 90% Identity
- -
- 80% Identity
- -