Nrev024627.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nycteola revayana
Gene Symbol
Zfy1
Assembly
GCA_947037095.2
Location
OX344856.2:1188804-1192146[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.041 3.9 9.1 3.3 1 23 118 140 118 140 0.96
2 19 0.00022 0.021 16.2 1.9 2 23 147 169 146 169 0.92
3 19 5.5e-07 5.1e-05 24.5 1.4 1 23 175 197 175 197 0.98
4 19 1.7e-06 0.00015 22.9 4.4 1 23 203 225 203 225 0.98
5 19 0.00014 0.013 16.9 0.2 1 23 231 253 231 253 0.98
6 19 0.0014 0.13 13.7 0.4 6 23 263 280 263 280 0.98
7 19 0.00017 0.016 16.6 4.0 1 23 286 309 286 309 0.97
8 19 9e-06 0.00084 20.6 1.9 1 23 397 420 397 420 0.94
9 19 7.2e-07 6.8e-05 24.1 1.4 1 23 426 448 426 448 0.99
10 19 5.8e-05 0.0054 18.1 1.5 1 23 454 476 454 476 0.98
11 19 0.004 0.37 12.3 0.1 1 23 481 503 481 503 0.96
12 19 0.055 5.2 8.7 0.2 6 23 513 530 512 530 0.97
13 19 2.6 2.4e+02 3.5 2.3 1 23 628 649 628 649 0.95
14 19 0.0025 0.24 12.9 0.4 3 23 834 855 833 855 0.96
15 19 0.034 3.1 9.4 0.1 1 23 861 884 861 884 0.95
16 19 0.00017 0.016 16.6 5.4 1 23 890 912 890 912 0.97
17 19 0.0091 0.85 11.2 1.8 2 23 919 940 918 940 0.97
18 19 6.9e-06 0.00064 21.0 0.3 1 23 946 968 946 968 0.99
19 19 0.0002 0.019 16.4 1.3 1 23 973 996 973 996 0.94

Sequence Information

Coding Sequence
ATGAAAGTAACGAGGGCTGTTTGTTGCAGGGACGCCTGCATACTGGATGATAGAGAAAGATATTCATCAGACCAATCAGATGATGAGCCTCTAGCGACTATCGCCACCCGAAAGGCCTCCAATCTTTACACGAATTTCTACCAGGCTCTGTTGAACTTTAGGAACCATTTGGTTACTGATCACAAAAACCAAGACACATATCCTGACTTTACAGACTCCAGTCAGTCTGAACCTGAAGAAGTGGATAATTTCGACGATCTAACACACTGTAACATGCGCAAAGACAGAATGGACGACGAAACGAGACAAGAACTCAGCGAAGTACAAACCAAAGTCAATGGAAAAGTGTTTTATACTTGCAAGATCTGTGGTAAAAACTTGAGTTCTTCACACACATACGTCTTCCATAAGAGAATACACACGGGCGAGAGACCCTGCGTCTGTCACATCTGCGGGAAACAGTTCCGGGCGCCAAATGGCTTGCAACGACACCTCTCAGAGACGCACGAGAAATTAAAACGGTACAATTGCAATTTCTGTCCCAAAAACTTTGCAAATTCACAGAATTTAAAGCAACATATGAGAATTCATACAGGAGAGAGGCCTTTTGTGTGTTCGCACTGTGGGAAGCGGTTCACACAGAGCGGCTCCTTGCATGTCCATTTGAAGACTCACAGTGAGCAGTTCCCTTACGTGTGCGCCGAATGTGGAGCAAAGTTCCGTCTGAGGTCAGGATTAGCGCGCCATCGGCTGAAACACACAGGGGAGAGACCGCACGCCTGTCCTTGTGGCAGGGCGTTCCGACAACCACATGAGTTAAAAGCACATACGCTCTCTCACTCAGGAGCCCGACCGTTCACGTGTACCACCTGTGGAGCTACATTTAGACAGAAACGAGCGCTGAGGCATCATTCCAAGCGAATGCACGAAGCCGACCTCGCAAATTTCATTGCCCTCACTCCCGTCCTTTCCCTTTTCAGGAAATTAGATAGGCGGGAGGTTAAAATTGAAGAGATACCGAAAGTTGAAGGGGCTTCGGGCAGGGTACATGAAGTAGATTTGGAGCCAAGTAAGGTAATAACGGTAGGTGAGGACGGACGGAAAAGAGTGGAATGTGGAATTTGTGGACGACGTATCGCCGCAGGGGGCTGGAAGAGACACTCCCGCGCACATTCATCGGCCCGCAGACACAGCTGTCACACGTGCGGATTGTCGTTCACCGACAGCGGGAACTTGGCGCGACACACGAAGGCCGTGCACGCCAAACTTCGTCCTTACACATGCGAGATCTGCGCGAAGACCTTCACACGAAACGGACATTTAGCGGACCATATGAAATCACATTCGGAGAGCCGCGAATACGTGTGCCACATCTGCGGGAAGCAATCGAAGTCCAGCGCAGCGCTCAGGATGCACAAGAAGATGCACGAAGCTCACAAGTTCGAGTGCGTGCAGTGCGCCGCGCGCTTCAAGCGGCGCGCCGAGCTGCGCGCGCACGCCACCGTGCACTCCGGCGAGCGCGCGCACGTCTGCGCCTGCGGGAGGGGCTTCCGGCTCCGCAGCCAACTCACCATGCATGCCAAACTACACCAAAAACACAATACGTACGAGCCCCCCGCGGCCCCggcgcccgcgccccccgcggcCCCGGCGCCCGCGCCACCCGCGGCTCCGGCGACCATGCCCCCCGCCCCCGTCGCGGCCCCGGCGCTTGCAGCCCCCGCCCCGCCCGCCTACCCGCGCTGCTCCCCTGAGCGCGCCCCCGTGGCCCCCGCGGCCCCCGCTCCCCCCGCGGACGAGATCACGTGCCAGTACTGCCACACTGCGCACCCGGCGGAGCGCTTCGAAGTGCACCTCATCAGGGAGCACTACGAGAGCCTGTTCCACTGCGCGGAGTGCAACAAGTACATCGACAAGAAGCTGTTCCTCATCCACATGACGATGCACGCGCGGCAGTACATGCAGGACCGAGAGTCTGGGTACGACAGCGGGTTCGCAGACAACAGTGACTCGGGGACCGATGTCTCCGAGTCGCCTGAAGTGCCGGCCGATGACGAAGAGGGGGTCGCCCTGTACCTTCCGTTGCTGCCATTCCGGGAACCGTTGCGGGCCGCGCGGGATCCGGTGCGGGTCATGCCGGATCCGGTCCCGGCCGAACCGGCACGGATGCCGTCTGTACCGAATCCGGTTCCGGCTGTACCGAAACCGGTTAAACCGACCGCTAGAATCGATGAGGATGACGATGACGATGACTTCTCAGATCAGAGTGACATAGAATTCGAACCACTACCTCAATCTGTGTTTGAAGCTATAGAAGACACTGAAGATCATCAACCGTCCGGAGAAGCGAATACATCTGACGAGTATGACGATGCACCTACACCAGAACAAGTGAGCAACAACAATAATCCGAGGAAAGTTTCTAAacgtaagaaaaataaaagttctCAATGTCCAGAACTCGTACAAAAGCGACGAAAGTCACGGAAGCGCCGAATCTGTCCGATATGCTCCAAGGAGTACACGGCCTCCTCCAGCTACTTTTATCACATGAAATACTCGCATAAAGCGGCCAAAGAGTTCAGCTGCGAGATCTGCAGCGCCAAGCTCGGCACTCAAGCGAGCTTGAAGCAACACGTCGCGTCTGTACACGCCACGGAACATCAGCATGAGTGCAAGGAATGCCACAAAAAGTTTCGATCCAAGGCTAGTCTGTACATCCATGAGCAAACCCATCAAGAGAAGAAGGGCTGGTCGTGTCCGCAGTGTCACCTCGCGTTCCGGTGGAAGACTGAGATGCAGCGACATTTGAAACGACATGCCGCTGAAAAATCCTATGTTTGTGAGACGTGTGGGCGCGGCTTTAACGTACGGTATGACTTGTTGAGACATGCGCGCACGCATACCGTCGGCAAGTTTACTTGCGACACGTGCGGGCAGACGTTCGCTCAGCTCAGATATTTGAAAGTTCACACCAGTAATAAACATTCTGGTAACATTACTGCAAAGATTATGCATGGAAAGAAATAA
Protein Sequence
MKVTRAVCCRDACILDDRERYSSDQSDDEPLATIATRKASNLYTNFYQALLNFRNHLVTDHKNQDTYPDFTDSSQSEPEEVDNFDDLTHCNMRKDRMDDETRQELSEVQTKVNGKVFYTCKICGKNLSSSHTYVFHKRIHTGERPCVCHICGKQFRAPNGLQRHLSETHEKLKRYNCNFCPKNFANSQNLKQHMRIHTGERPFVCSHCGKRFTQSGSLHVHLKTHSEQFPYVCAECGAKFRLRSGLARHRLKHTGERPHACPCGRAFRQPHELKAHTLSHSGARPFTCTTCGATFRQKRALRHHSKRMHEADLANFIALTPVLSLFRKLDRREVKIEEIPKVEGASGRVHEVDLEPSKVITVGEDGRKRVECGICGRRIAAGGWKRHSRAHSSARRHSCHTCGLSFTDSGNLARHTKAVHAKLRPYTCEICAKTFTRNGHLADHMKSHSESREYVCHICGKQSKSSAALRMHKKMHEAHKFECVQCAARFKRRAELRAHATVHSGERAHVCACGRGFRLRSQLTMHAKLHQKHNTYEPPAAPAPAPPAAPAPAPPAAPATMPPAPVAAPALAAPAPPAYPRCSPERAPVAPAAPAPPADEITCQYCHTAHPAERFEVHLIREHYESLFHCAECNKYIDKKLFLIHMTMHARQYMQDRESGYDSGFADNSDSGTDVSESPEVPADDEEGVALYLPLLPFREPLRAARDPVRVMPDPVPAEPARMPSVPNPVPAVPKPVKPTARIDEDDDDDDFSDQSDIEFEPLPQSVFEAIEDTEDHQPSGEANTSDEYDDAPTPEQVSNNNNPRKVSKRKKNKSSQCPELVQKRRKSRKRRICPICSKEYTASSSYFYHMKYSHKAAKEFSCEICSAKLGTQASLKQHVASVHATEHQHECKECHKKFRSKASLYIHEQTHQEKKGWSCPQCHLAFRWKTEMQRHLKRHAAEKSYVCETCGRGFNVRYDLLRHARTHTVGKFTCDTCGQTFAQLRYLKVHTSNKHSGNITAKIMHGKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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