Nrev032404.1
Basic Information
- Insect
- Nycteola revayana
- Gene Symbol
- -
- Assembly
- GCA_947037095.2
- Location
- OY855748.1:11392779-11393129[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-08 1e-05 26.1 0.1 5 40 19 53 15 58 0.82
Sequence Information
- Coding Sequence
- ATGGCGCGGAACAGGGTGGTAGTACGAAAAAGAGGTGGGCATTCGACTAATAACATGCTTATGGCCCTTAAACTGCACAGATCAGGTGAAAGTATTAGAAAAGCTGCGAAAACTTATAATATTGCGTACCCAACCTTACGCCGGTACGTAGCGCTAAACTTAGATGTCAATACGGAGGATCTGGCCGAGAAGAGATTAGTGCCGAATTATGAAAATCATTTAGTTTTTATCGCTGAACAAGAAGAAATTTATAAAGAGTACATAAAGGAGTGTGCACTAAAATTTTACGGACTGACCACAAAAGACTGCCGTAAAGTGGCGTACCAGATGGCCAGAACtacaactttttaa
- Protein Sequence
- MARNRVVVRKRGGHSTNNMLMALKLHRSGESIRKAAKTYNIAYPTLRRYVALNLDVNTEDLAEKRLVPNYENHLVFIAEQEEIYKEYIKECALKFYGLTTKDCRKVAYQMARTTTF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00745605;
- 90% Identity
- iTF_01076413;
- 80% Identity
- -