Nrev030577.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nycteola revayana
Gene Symbol
-
Assembly
GCA_947037095.2
Location
OX344861.2:17653782-17656511[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.9e-13 1.4e-10 41.7 0.0 1 38 14 51 14 58 0.87

Sequence Information

Coding Sequence
ATGGATCCCAGAAAGAAGTCATATTCTAGATTCCGATACACACAAGAGACATTAGAAACAGCTCTTAAAGCTATTATCAGAGGTGAAACTAGTATAAATAAAGCGAGCAAAGCATATAACATACCAAAGTCAACTCTACACAACAAAATCAACAATAAAGTTCCATGGCAACGAAAAATGGGCCCAATGTCGGAACTATCGTTCGAAGAAGAGAACAAACTTGCACGCTGGattataaataaagctaaagttGGGTTTCCTATGCACCCAGATGAAGTTTATGATTCAGTAAAAGATTTCTTAGACACAAACCAACGAAATTCCAAATTCACTGATAATAGACCAGGTAAAAAGTGGCTATCACTGTTTCTAAAAAGACATCCAGATGTAACAAAAAGACATGCTGAACTCATATCAAAAGCAAGAGCTGCTGTTACAGAAGAAAGTTTAAGGAAATGGTTTTTAGAATTGGATCAATTTCTTGCCGAAGAAGACTTGCTCGATATAAAGGAAGATCCTAGTCGTATTTTTAACGCTGACGAAACTGGCATCATGACATGCCCAAAAACGGGGCTCATTCTTGgaccaaaaaattacaaaaatacctaCGAAATTGCAAATGGAGCAGAAAAAGAGTCCATTACAGTATTATGCACGTTTGCAGCAAATGGGACTGATGTGCCACCTTTTGTAGTTTATCCGTACAAGAGGATGCCGCCAGCAGTGATTCAAAATTTTCCAGATTCTTGGCATATAGGCCGTTCAGATAGTGGCTGGATGGTGTCTGAAACGTTTTTATCTTACATAGTCCTATTCTATGAGTGGCTGGTAGAAAATAACATCAAGTTTCCTGTGTTGCTCTTCCTAGATGGGCACAAATctcatataaatgaaaaaatgctCGACTTTTGCTCTGAAAAAAAGATATTCTTATACTGCCTTCATCCGAATGCTACACATATAATTCAGCCTTGTGATGTGGGTATATTTGGTCCACTTAAAAAGAGTTGGAAGAAGGTTGCAAGGAAACATAAACAGACCACTACTGCtccaataacaaaacaaaatttttcTGTTAAATTCAAGGAAGCTTACGATAAATCAATAAAACCTGGAATCGTAAAGAATGCTTTTAGGACTTGTGGATTATTTCCTATTGATCCTAATGCAGTCGACTACTCTAAGTGCATCAATACAAGGAGGCAAGAAATAGATAAAGAACAGAGTGATATGGATCTGAGCATTCCTGATTATGAAAAGGACGATTTGAGAAGTACAATGAAGGTGATCGAAAACGAAGTTGGACACAAGATCAGAAACGAATTCATAcagtcttattttattaatcgaGACCATGAACACCAGTTATATTCTTTATGgagtaaatgtaaattaaaacttgAAAACAGACGTCAGACTATGGCAACCCCATCAGCCGATGATATTCCGCTTGATTTGTCTAATGCGTCTTCTCAAAATGAAGTGGCCACATCATCAACTTCTGACAAACAATCTCATCCTTCCTCACCAATCAGTCCTGTTGCATTGACTATTACTGAATCAGCACAAATTCATGTTTGCCCTGAAGAAAATGACTTTGAAGCCGGCCCACCTGTTCTGAGTGAGCCTTGTAGTATTCTTCTAGACGATGAAATTCTGTTTGAAAATGTTATTGGATCACAATTTGAGACTACCGAtgaaatagtaaattttatcATGGAAAAGGAAACAACTAAATCTCCCATACCCTTGCCGTGGTATGATACATTTTCACAGATAGCACCAGACAACAATATTACGAACTCATGTGAAGTCAGTTGCTCAACTGTCCAAATTGATCATCAAAGCGAAGAAATCATGACCGATACAAGACAAAATGCAAATGTTATTGCCATAGCTTCCCCTGAAAGTCCCTCTATTATGAATTCCAAAGATAATGGGGATTTGATAAATACCTTAATACATGTTGCTGCTGAAACATCCAAAACTACTTGTCAAGAAAAAGATGAACCTGCTAGTGCCTTAGGCGATAAAAGTTTAGATACGTCAAGTGCGTCTTTAAGTCaaactatatcaaacaaacgtAAAGTTCCTATCGAAAGCTTTTTATCCTACCCTGAAATACAAAccaaaaagaaaagaataataatCAAAGAACCCATGCCATTTGGTTTAACAGGACGAAAGTATAAAGAGTACTTAGAAAATCGAGATAAAGAAAAGAAACAGAAAGAAGAAGATATACAAAATAAGAAGAAGGTACGAGAAGCCATAATTCAACGTAGACGTGAAAGTCAAAAGGAGAAAAAAGATTTGCAGAAAAAAGACTCCACACCGTTGCaaaaacaacacaaaaaaaagaaggaAACTGCTCAAAAATCACAAAACGAGGACATAGACATGCACTCTTCAACACCTGTATTGAGAGGAAATCAGCCAccactaaatataatttgtggAAAATATGTCATTGTGCAGTTCAAGACTGAGAAGAGAACGCGTTGTTTTGTTGGCAAAATTCTGATGATTGACgacgaaaaacaaaaaatgaagataGATTTTTTGAGAAAGAAGAAAGTCGTTGAAAATGTTATTAGCTTTGTAAAGCCCCAAGTCCCAGATATTTCTGAAGTAAATATTTCTGACATTGTACGTGTTCTGGATGAACCAAGTTGTTCAAGACGAGGAATGATCTCTTTTAGCGACGTAAGTTTTAAAGACATAGAGTAA
Protein Sequence
MDPRKKSYSRFRYTQETLETALKAIIRGETSINKASKAYNIPKSTLHNKINNKVPWQRKMGPMSELSFEEENKLARWIINKAKVGFPMHPDEVYDSVKDFLDTNQRNSKFTDNRPGKKWLSLFLKRHPDVTKRHAELISKARAAVTEESLRKWFLELDQFLAEEDLLDIKEDPSRIFNADETGIMTCPKTGLILGPKNYKNTYEIANGAEKESITVLCTFAANGTDVPPFVVYPYKRMPPAVIQNFPDSWHIGRSDSGWMVSETFLSYIVLFYEWLVENNIKFPVLLFLDGHKSHINEKMLDFCSEKKIFLYCLHPNATHIIQPCDVGIFGPLKKSWKKVARKHKQTTTAPITKQNFSVKFKEAYDKSIKPGIVKNAFRTCGLFPIDPNAVDYSKCINTRRQEIDKEQSDMDLSIPDYEKDDLRSTMKVIENEVGHKIRNEFIQSYFINRDHEHQLYSLWSKCKLKLENRRQTMATPSADDIPLDLSNASSQNEVATSSTSDKQSHPSSPISPVALTITESAQIHVCPEENDFEAGPPVLSEPCSILLDDEILFENVIGSQFETTDEIVNFIMEKETTKSPIPLPWYDTFSQIAPDNNITNSCEVSCSTVQIDHQSEEIMTDTRQNANVIAIASPESPSIMNSKDNGDLINTLIHVAAETSKTTCQEKDEPASALGDKSLDTSSASLSQTISNKRKVPIESFLSYPEIQTKKKRIIIKEPMPFGLTGRKYKEYLENRDKEKKQKEEDIQNKKKVREAIIQRRRESQKEKKDLQKKDSTPLQKQHKKKKETAQKSQNEDIDMHSSTPVLRGNQPPLNIICGKYVIVQFKTEKRTRCFVGKILMIDDEKQKMKIDFLRKKKVVENVISFVKPQVPDISEVNISDIVRVLDEPSCSRRGMISFSDVSFKDIE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01076322;
90% Identity
iTF_01076322; iTF_01076323;
80% Identity
iTF_01076323;