Nrev031962.1
Basic Information
- Insect
- Nycteola revayana
- Gene Symbol
- -
- Assembly
- GCA_947037095.2
- Location
- OY855748.1:6130938-6136651[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0046 1.1 10.0 0.0 18 38 89 109 87 114 0.87 2 2 4.3e-10 1e-07 32.5 0.1 2 36 427 461 426 462 0.91
Sequence Information
- Coding Sequence
- ATGGCGTTTTTGTACACAAACATTCAATATTGTGAAATGGTGAGAATGTTAGCGCGTTGTAATGACAGCGTTAACTTGGCAGTGCGACGGTTTCGAGAAGAGTTTGGAGTATCTGTATCCAACAGGACAATGCTAGCAGCTACACAGAGGCTTCGAGACTATGGTACATTTACGCCTCGGTCAATGTACAGAGGGGGTCCCGTACATGTTGAGCCTGAGATACAAGAACAAATACTGGATTATTTTCATGAAAATCCAACAGCCAGTACGCGGCAGGCGGGCCGACACTTTGGTATCAGCCATATGATTGTTTGGAGAGTATTAAAAAGTGACCATCAGCACCCGTTTCACTACAGACGGTGCCAGGAACTAAGTCCATTGGATTATGAACCCCGCGTGGCGTTTTGTGAATGGTTCTTACAAGATTTCACCAGGAACATCCTCTGGACAGATGAGTGCACATTTACTCGGAGAGGTTTATTTAACCAGCACAACAGGCACATGTGGGTGCACGAGAATCCTATGTTGATGGAGGATGATTCATTCCAGCACAGGTTTTCCTTAAATGTGTGGGCTGGTATTATCGGACCGTACGTACTAGGGCCAATCTTTTTGCCACGACTTACTGGTGAGGTGTACCTGCAATTCCTCCAAGTAACTCTGCCGCGACTAATAATTGATTTGTTGGATACACCGAATGTGCCTTTATCAGCTGCAAGCCAAATTTACTACCAACACGACGGTGCCCCGGCGCACTTTTTGTGGACCGTGAGAAGGCATCTTGACCAAGAATATGGCACACGTTGGATCGGGCGCGGAGGCCCAGTGCAATGGCCACCAAGATCGCCCGATTTAACAccattggatttttttttgtggggtcgtgtaaaaGCACTAGTGTATGACGATGGAAATGGACCAACTAATGTGACGGAACTGCGTGATAAAATTGAATCAGCGTTTCAACAAGTGAAAAGTGACACTCAAGTGCTCGATTCGCTGAAAAATAACTTAAGGAAGCGGGCTGTGTTGTGTATTCAACAAAATGGTAGACATTTTGAATCTTTGATACCGCAACGAGATGACCTCAAAACACACGATTCTCTTTCTGAAATGTGGAAATCTGCTGCCGAAAAAACAATGAAAGATGCTGCCAAAGAAGAGAAGGATGCAGCCATATTACGGGGTGATGTCAGCAATGCTGGTATTCCGATGATACCTGTAAGAGCAGATGCCTGTTGGAatattatggACAGAAAGAAACGCAAGTGTTATAGTAATGCCCAAGTGGCTGAAGCACTTTCATCAATTCGACAAGGTATGAGTATTTACAAAGCCTCGAGACAGTATAATATACCAGAGACTACATTACGGAGTAAACGAGATGGGCTTTACGAGAATGAACATTGTGGTAAGCAACCAGTACTTAACCTAAACGAAGAAAGACAAATCGTTGATTGGATCCATTACCTTGGTAAATGTGGCTTTCCAGTTACTAAGAATCAATTATTACACACTGTCTTTAAGTTAGTTGAAAACCTGCAGCGCCCTAATCCGTTTAAAGAAGGAGTTCCTGGAAAGAAATGGTTTTCAGGCTTTATGCTACGACATCCAGCAGTGTCAAAACGTGTGGCACAAAATCTTCCAACAAGTAGAAACCAAGTCACGGAAGTTGCATTGCGAGCGTGGTTTGATAGAGTACaatcatattttaaagaaaacgatTTGCTGCAAGTTCTTCAAGATCCAAAACGTATATTCAACTGCGATGAAACTGGGTTTTTTCTTTGTCCAAAAGACAAGCAAGTTTTGGTAAAAAAGGGTAGTAAACGAGTATACAACCGCGTTGCAAATGACGAAAAAGAATGTTTGACCGTTTTAGTCAATGTGTCAGCAGATGGTAATTTAGCTCCGCCAATGGTACTTTTCCCCTACAAGAGGCTACCTAACAATATCAAGTCAACGGTTCCTTCGTGGTGGGGACTTGGTAACACAGAATCAGGCTGGATGACTATGGAGTCGTTCTATGAATATGTTGCAAATGTGTTTTACCCATGGCTTCAACAATAG
- Protein Sequence
- MAFLYTNIQYCEMVRMLARCNDSVNLAVRRFREEFGVSVSNRTMLAATQRLRDYGTFTPRSMYRGGPVHVEPEIQEQILDYFHENPTASTRQAGRHFGISHMIVWRVLKSDHQHPFHYRRCQELSPLDYEPRVAFCEWFLQDFTRNILWTDECTFTRRGLFNQHNRHMWVHENPMLMEDDSFQHRFSLNVWAGIIGPYVLGPIFLPRLTGEVYLQFLQVTLPRLIIDLLDTPNVPLSAASQIYYQHDGAPAHFLWTVRRHLDQEYGTRWIGRGGPVQWPPRSPDLTPLDFFLWGRVKALVYDDGNGPTNVTELRDKIESAFQQVKSDTQVLDSLKNNLRKRAVLCIQQNGRHFESLIPQRDDLKTHDSLSEMWKSAAEKTMKDAAKEEKDAAILRGDVSNAGIPMIPVRADACWNIMDRKKRKCYSNAQVAEALSSIRQGMSIYKASRQYNIPETTLRSKRDGLYENEHCGKQPVLNLNEERQIVDWIHYLGKCGFPVTKNQLLHTVFKLVENLQRPNPFKEGVPGKKWFSGFMLRHPAVSKRVAQNLPTSRNQVTEVALRAWFDRVQSYFKENDLLQVLQDPKRIFNCDETGFFLCPKDKQVLVKKGSKRVYNRVANDEKECLTVLVNVSADGNLAPPMVLFPYKRLPNNIKSTVPSWWGLGNTESGWMTMESFYEYVANVFYPWLQQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -