Nrev020561.1
Basic Information
- Insect
- Nycteola revayana
- Gene Symbol
- Mblk-1
- Assembly
- GCA_947037095.2
- Location
- OX344851.2:11367792-11381009[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-13 1.6e-10 41.5 0.0 1 36 80 116 80 120 0.93 2 2 4.8e-18 1.2e-15 57.9 0.0 1 43 285 328 285 330 0.95
Sequence Information
- Coding Sequence
- ATGCTGTGGCGACCTTTTGACATGCTAGGATATGAATTACTGTATTATTCTTTGagGCTACCAGATGTGGGGGAGAAGCCTCCGGCCTCGTCCCCGAACCTGGTGGAACAGCCCCTCGATCTGAGTGCGAAGTCCACGTCCAGCACCAGCGGCACTCCTCCCCCGGATGGGAAACTTGATAACAGAGTGAAGCGGCTCGGTCCCGATGGCGTGGGGAACAGTGGCCGGAGAGCGTATACGGAGGACGAGCTGCAGGCGGCCGTGCGCGACATCCAGGCGGGTCGCCTCGGCACGCGGCGCGCCGCGCTTTTGTACGGCATCCCGCGCTCCACGCTGCGCAACAAGCTGAACAAGTTCGGCGCCGCGCCCGACGCGCCCGACTCCGAGCCCGACTCCGACTCCGAGCGGCCCGACTCCCCCCAGCCGCTCGCCGTGCCCATCCTCAAGATACCCACCTTCCGACCCGACGACAAGAGTCCCTCGCCCGCCGCGTCCGGCCCGCCCATCGCGCCCGTCACGCCTATGGTGCCGCAGCCCTCGCTCGCACCGCCGTCGCAGCTGCTGCTGCCCCCGTCGGTGTTCGCCGACCCGCCCTCCACGCAGCACCTCTTCACGTCGCTGAGCGACGTCATCGCCAAGAGCATCAGCCAGAAGTTCCAGCAGCCGCTGGAGAGGCCGCAGGCGGAGATGTTTATGCGTGGGCCGGACGCGCGCCACGTGTCCGTCATCAAGACGCCGCCGGACGCGCAGCGCTACGCCGCGCCCGGGAACAGCAAGCAGACCAACAACAACGGGCAGCCCGCCGCCGGCGGCAAGGGCACGCGGCCCAAGCGCGGCAAGTACCGGAACTACGACCGTGACAGCCTCGTGGAGGCCGTGAAGGCGGTGCAGCGCGGGGAGATGTCCGTGCACCGCGCCGGCTCCTACTACGGCGTGCCGCACTCCACCCTCGAGTACAAGGTCAAGGAGCGCCACCTGATGCGTCCGCGCAAGCGCGAACCCAAGCCGCCCCAGGACATCAACAAGCCGCCGCCGCCGAAGCCTCCGCCGCCGAAGCCGCCGACGAAGCCGTTCACCAACGGCATGAACGGGCCGGACGCGCCCGCCTACCCCGGCGGCTACCCGTTCTGGGCCGGCGGCAACttcgcgccgcccgcgccggaCCTGTACGCGTCGCACATGATGCGGCGCCTGCGCGAGGAGGCGCCCCCCGCCAATGGCTCGTTCCTGGAGGGCATCATCCGCTCGTCCCTGGAGCGGCCGGCGCTGCTGGCGCGGCTAGAGCGGCGCGAGGACGAGCCGCCGGCGCGGCGCGCGCGGGTTTGCGAGGGGGCGGGCGCGGGGGGTGCGGGGGAGGCGCTGGCCGCGGACCTGCGCGACGCGGTGCAGCGCCTGCGCGCCGACAAGCTGCGGCCCCGCAACGGCACGCCcacgccgcccgcgccgccagagccgcccgccgcgccgccggacCGCGCCTAG
- Protein Sequence
- MLWRPFDMLGYELLYYSLRLPDVGEKPPASSPNLVEQPLDLSAKSTSSTSGTPPPDGKLDNRVKRLGPDGVGNSGRRAYTEDELQAAVRDIQAGRLGTRRAALLYGIPRSTLRNKLNKFGAAPDAPDSEPDSDSERPDSPQPLAVPILKIPTFRPDDKSPSPAASGPPIAPVTPMVPQPSLAPPSQLLLPPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLERPQAEMFMRGPDARHVSVIKTPPDAQRYAAPGNSKQTNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDINKPPPPKPPPPKPPTKPFTNGMNGPDAPAYPGGYPFWAGGNFAPPAPDLYASHMMRRLREEAPPANGSFLEGIIRSSLERPALLARLERREDEPPARRARVCEGAGAGGAGEALAADLRDAVQRLRADKLRPRNGTPTPPAPPEPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01264317;
- 90% Identity
- iTF_01264317;
- 80% Identity
- -