Basic Information

Gene Symbol
xbp-1
Assembly
GCA_947037095.2
Location
OX344851.2:19061208-19063976[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 3.6 4e+03 -1.1 0.2 15 25 29 39 28 40 0.82
2 4 3.6e-17 4.1e-14 53.3 6.1 2 52 44 94 44 97 0.96
3 4 4.9e-06 0.0055 17.6 1.8 27 55 83 111 81 113 0.91
4 4 1.8 2.1e+03 -0.2 0.0 15 39 133 157 130 160 0.88

Sequence Information

Coding Sequence
ATGAGCACTCCTATTATCATCACGGTGCCGAACAACTACCTGGCGGTGGAGGACATGAAGTCGGAGTTGTTGCTGGACGTAGCCTCACCGGCGCAGTCCAGAAAGCGTCGCCTGGATCATTTGACATGGGAGGAAAAAATGCAAAGGAAGAAGTTGAAGAACCGCGTCGCCGCGCAGACCTCGCGGGACCGGAAGAAGGCGAAGATGGACGAGATGGAGAGCAGGATACAACACTTCATCGACCTGAATGAGCGGCTGACGAGTGAAGTGGAGAACTTGAAGGCGATGAACGAGCGTCTGTTGAGCGAGAATGCGTCGCTTCGCAGCGAGGCGGCGGCGCGGCCCGTCGCGGGGGCCCCTGGACCGGCAGAGTCTGTTCCTCAGCAGAAGGAAGGGCCCCCTGCGGCGAGCCGCGCGGCGCGCCTGCTGCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCGCTCACTTCGACTCCCCGGAGTACCTCGATACCCTCACTCAACTTGCAGACTCCCTCCTCAAAGAGATTGATGCAGGTGTTGCAGGAACGCCTCAAAATGACTCAGTCAGGGACGATAGAAAGTGCCCTGAAGGAGATGAAGTGGATATTGTCACAGCACTCCTATGCGCATCCGTACAAACCAGAGATTGTCATCACTGACCCTAATGAAGTACAaattaaagaagaaaataatgacAAGGGCGATATTTTCTACGCTAGTTGTGAGGCCACTGACTGCATCACTATTGAAGTGCCATGTGAAGAAACAATAGTTGAAGAAACACCTTTACAGATTGAGACAGACTTCAGTGAACTGACAGACAACTGTTCAGGAATCACGTTAGAGTGTGACATGAAAATGCTCTCTCCTATGACTATGTCGCCTAAATCTGTAGAAGAAAATCTCGGCCTTTCGCCTTCGCACACAATAGTGAGCTCAGACCTGGGCTATGAGTCACTAGCCTCACCGCTCAGTGAGTCAGAATCATTAGACTTGTCAGATTTTTGGTGCGATTCATTTTCAGAACTGTTTCCAGGTTTGGCATAG
Protein Sequence
MSTPIIITVPNNYLAVEDMKSELLLDVASPAQSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRIQHFIDLNERLTSEVENLKAMNERLLSENASLRSEAAARPVAGAPGPAESVPQQKEGPPAASRAARLLLAMCLLSQTSSLTSTPRSTSIPSLNLQTPSSKRLMQVLQERLKMTQSGTIESALKEMKWILSQHSYAHPYKPEIVITDPNEVQIKEENNDKGDIFYASCEATDCITIEVPCEETIVEETPLQIETDFSELTDNCSGITLECDMKMLSPMTMSPKSVEENLGLSPSHTIVSSDLGYESLASPLSESESLDLSDFWCDSFSELFPGLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01197452;
90% Identity
-
80% Identity
-