Basic Information

Insect: Nudaria mundana
Gene Symbol: THAP3
Assembly: GCA_963556515.1
Location: OY748314.1:2546970-2573654[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.44 57 5.7 0.2 1 23 362 384 362 384 0.97

2 11 0.0027 0.35 12.7 8.1 1 23 391 413 391 414 0.94

3 11 0.33 43 6.1 3.2 1 23 418 440 418 440 0.97

4 11 0.29 38 6.3 1.9 1 23 445 468 445 468 0.92

5 11 0.0038 0.48 12.2 0.3 1 23 472 495 472 495 0.93

6 11 8.8 1.1e+03 1.6 0.1 3 20 509 526 508 528 0.84

7 11 0.81 1e+02 4.9 0.6 3 23 589 610 587 610 0.96

8 11 0.0088 1.1 11.1 1.1 2 20 626 644 625 647 0.89

9 11 5e-05 0.0065 18.1 1.1 1 23 653 675 653 675 0.98

10 11 0.00012 0.016 16.9 2.0 1 23 682 704 682 704 0.97

11 11 3.5e-05 0.0045 18.6 1.3 1 23 710 733 710 733 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.44	57	5.7	0.2	1	23	362	384	362	384	0.97
2	11	0.0027	0.35	12.7	8.1	1	23	391	413	391	414	0.94
3	11	0.33	43	6.1	3.2	1	23	418	440	418	440	0.97
4	11	0.29	38	6.3	1.9	1	23	445	468	445	468	0.92
5	11	0.0038	0.48	12.2	0.3	1	23	472	495	472	495	0.93
6	11	8.8	1.1e+03	1.6	0.1	3	20	509	526	508	528	0.84
7	11	0.81	1e+02	4.9	0.6	3	23	589	610	587	610	0.96
8	11	0.0088	1.1	11.1	1.1	2	20	626	644	625	647	0.89
9	11	5e-05	0.0065	18.1	1.1	1	23	653	675	653	675	0.98
10	11	0.00012	0.016	16.9	2.0	1	23	682	704	682	704	0.97
11	11	3.5e-05	0.0045	18.6	1.3	1	23	710	733	710	733	0.95

Sequence Information

Coding Sequence: atgagGTGTTGTGTACCTTACTGCAAGAATGATTCAAGACATATTTCCAAAATTCAAGGGATTACATTTCACGTATTTCCTAATGAGCCCACACTTCGTACAGCCTGGTTGAAAGCATTAGGTAAAGTGGACTATGAGCTCAAAGAGAGAACTGCAGTCTGCTCCGAGCATTTTCTGTGTGAAGATTTGTATGAGACAAGGGGTGGATTGAGGAAGGTCAAAATTGGAGCTGTGCCTTTTATATtacagAATCCAGCAAATGTGTGTGATTATGGAGAACCAGCAGTTTTAAAGGTTTGTCGGATTTGCTTAGCGATTGACTCGAAGCTATTACCTATCAGAATGTATAACTTGGACCAGGCGTATGAACATGTCACTGGGATATCGCTACAATCAGATTATCGTCTACCCCAGACAGTATGTACAGAGTGCGCTCAGAGACTCAACAACTGCAATAGCTTCAGAGAGAGGACGTTGAGAGCCAACTCGCTTATGTTGGAGATAGTCAAGAAACAAGATCACttaaCCATTCACAACATCAAATCGATAAATCGAGATAATAATCGACTAACATCACCACTATCATTGAAATATTTCTTACCGAATCATTACGATTGTACCGAGGAGTATTTAGATAACCATTCTGTTGAACCTGAAGAAAAATATACCACAAATAACGTGGATGTAGATATAAAAGAAGTATTTGTAAATAATGAGGTCATAGACAAACAGCCTAATGTATATGAATCGTATGAAAACTTCGATGACGATTCGCAAGACGACTTCGAAGGAAAACTAGTGATTGACCTTGATCCACATTATTCATCCGACGACAGTTTACCATTGCAAAAGTTTAAGccaaaaaagttgaaaaagaaaaaagatatACAAAAAAAAGTGAAGCGTAGTAAAAGTGTGAAAATCGATAAAATACCCGTCGAACCGAAAATCGATAGACGGAGAAAACCGTTTTTGAACGATGATTTGAATGAAACTTTGTTTACCATTACCGATTTGAGTGTCGACGAACAAATCGCTGAGATATCGAAAAGGCGGGAAAGTTCTAATTATAAGAACGGTGTTTTTAAATGTGAAGCGTGTTTCAAAGGGTTTCTGGACGAAGATGCTTATAATAGTCACGTGATTCGACATACTGATGCGTCAGGAGAGTTCGAATGCGACATTTGTAAGACACATTTCAAACATCAACACGCTCTAAGAAAACATGTGACCGCTCATCATACGCAGAGGTTCAGTTGTAAACAGTGTACGTATGTGACGACACACAGACAGACTGCGAGACTGCACGagagATGGCACAACGGCACAAAGTACAGCTGTCCACATTGTCCGCAAGAGTTTCTTAAATTTACAACTTACATGGGCCATCTGAGAATCAAACACCCTTCGGACTTCGTGTGCGAAATATGTGGCTACTCGTTCGTGAGTGTGAAAGGGATACAACTACATAAGAAACTTAAACACAGACTGGATAATGGGCAGATACCTGATGACGGTCCGCTGTGTGAGTTGTGTAACGTACGATTCGTATCTGTTGAAGCTCACCAGAGACACCTCAGCGTATCTGCAAGACATTCTACAGGCACAGATATAGACAACCGGGAAGCGAACAAACCTAAGAAAGTGAGGAAATCTAAAGAGTTGAGAGAGATAGAGATAAGATCTCGGGCGTGTGAGAGAGAGACGGAGGGAGACAAGAGGATGTATCCCAGTCAAGTGAGGAAGGTGGAGGGGCCTATCGCTTGTGAACAGTGTGATATTCAACTAGAAGATTCAAGAGCATACCACAGCCACTTCCGACGTATGCACCCGGACAAGAATCGAACCAACTACCCGTCGATGAAGTCGCCGTGTATGTGCGAGGTGTGCGGGAGAATGTTTCAGAGTTACGCCCTACTGAAAGACCACCGCTGGACGCACACGGGCGAGCGTCCGTTCTCGTGCGACAGTTGCGGCAAGTCGTTCCGCATGAAGCAACGTCTGGTGGCGCACCGCCGCGTGCACAGCTCGGCGCGGGCGACGTACGCGTGCGCGCTCTGCGGGAAACTGTTCTCCACGCATAGTAACAGGCAACGGCATATGTTTATACACACCGGACTGAAACCTTTTAAATGCGAGATGTGCGGGAAAGGGTTCAAGCATGCGAGCGAGAAACGAGCTCATATCACGTACGTACATCTGAAGAAACCTTGGCCTAAGAGGGCGAGGGGTAAGAGAAgaccggataccagacagATGAGGGAGGAGGTTCAGGGAGGCTGGAGGCGTGGGGGGTAA
Protein Sequence: MRCCVPYCKNDSRHISKIQGITFHVFPNEPTLRTAWLKALGKVDYELKERTAVCSEHFLCEDLYETRGGLRKVKIGAVPFILQNPANVCDYGEPAVLKVCRICLAIDSKLLPIRMYNLDQAYEHVTGISLQSDYRLPQTVCTECAQRLNNCNSFRERTLRANSLMLEIVKKQDHLTIHNIKSINRDNNRLTSPLSLKYFLPNHYDCTEEYLDNHSVEPEEKYTTNNVDVDIKEVFVNNEVIDKQPNVYESYENFDDDSQDDFEGKLVIDLDPHYSSDDSLPLQKFKPKKLKKKKDIQKKVKRSKSVKIDKIPVEPKIDRRRKPFLNDDLNETLFTITDLSVDEQIAEISKRRESSNYKNGVFKCEACFKGFLDEDAYNSHVIRHTDASGEFECDICKTHFKHQHALRKHVTAHHTQRFSCKQCTYVTTHRQTARLHERWHNGTKYSCPHCPQEFLKFTTYMGHLRIKHPSDFVCEICGYSFVSVKGIQLHKKLKHRLDNGQIPDDGPLCELCNVRFVSVEAHQRHLSVSARHSTGTDIDNREANKPKKVRKSKELREIEIRSRACERETEGDKRMYPSQVRKVEGPIACEQCDIQLEDSRAYHSHFRRMHPDKNRTNYPSMKSPCMCEVCGRMFQSYALLKDHRWTHTGERPFSCDSCGKSFRMKQRLVAHRRVHSSARATYACALCGKLFSTHSNRQRHMFIHTGLKPFKCEMCGKGFKHASEKRAHITYVHLKKPWPKRARGKRRPDTRQMREEVQGGWRRGG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01075536;
90% Identity: iTF_01075536;
80% Identity: iTF_01075536;