Nmun036839.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nudaria mundana
Gene Symbol
ZFX
Assembly
GCA_963556515.1
Location
OY748312.1:3076128-3080879[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.028 3.7 9.5 5.7 1 23 146 169 146 169 0.95
2 16 2.9e-05 0.0038 18.9 0.6 1 23 178 201 178 201 0.96
3 16 0.0082 1.1 11.2 0.6 2 23 214 236 213 236 0.97
4 16 0.0003 0.039 15.7 0.4 1 23 245 268 245 268 0.97
5 16 0.0039 0.51 12.2 1.5 1 23 280 303 280 303 0.94
6 16 0.001 0.13 14.0 0.4 2 23 329 351 328 351 0.96
7 16 0.0017 0.22 13.3 1.3 2 23 361 383 360 383 0.96
8 16 0.045 5.8 8.8 0.8 2 19 388 405 387 408 0.92
9 16 0.0011 0.14 13.9 1.0 1 21 412 432 412 435 0.95
10 16 0.1 13 7.8 0.4 3 23 445 466 444 466 0.96
11 16 0.00075 0.097 14.4 2.9 1 23 471 494 471 494 0.91
12 16 9.7e-05 0.013 17.2 0.5 2 23 506 528 505 528 0.96
13 16 0.018 2.3 10.1 2.3 1 23 550 573 550 573 0.93
14 16 0.03 3.8 9.4 2.6 2 23 604 625 603 625 0.97
15 16 0.0088 1.1 11.1 0.2 1 23 691 713 691 713 0.97
16 16 0.18 24 6.9 2.0 1 23 719 742 719 742 0.96

Sequence Information

Coding Sequence
ATGGCAGataataaagttataataaatgtTAAAACTGAACGAAAAGATCCTACCTCATATTTACCTGAAGAagcaatgtcttatgaaataaaatctaaaaagaaaaaaaagaaaaaaaaaattaaggaagaTCCGTTTAAGGATGTCGATGATAATAATGTTCAAATAACTTCAGTAACAAGAGAAATGTCACCAACTGCGTTTGATCCAGAAGTCAACATAAAAGCTGAAAATATTGAGGTCGAATTAGACTTTAACGATTTTACTGATAATTCTGGTCTGCTGTTGGAAGGACCATATAGTGATGATAGTCAGGAGCCCGCAGTGAAAATCAATCAAAACAATGAGGCCACCCTACTTACCTTTGAGAGTGTAATCAGTGGCAGGCACTTATTAACACCCAAACGAGAGCCACATTCACCACGTACAGCCTCACACTTCTGCAAAATATGTCATCTAGCCTTCCAGACAACGAAAACTCTAGAGATGCATCAAAAAAGGCAGCACAAGATTTTTAGAAAGTTCTTTGAACACATATGTGACTATTGTGGTATGGCGTATGAGACAAAAAATAGTCTAGTGGCACATATTAGGAGAAAACATGGACCTGACTCAACACCAGAGGATAGAGATGAAAAAACATGTGAAATATGTGCTTTGGTGTTTAAAGGTACGGCCAGATTACGTATGCATATGAGACGTAAACATGGAGCCTTTGAAGATTCCTTCAAACATGTATGTGACGATTGTGGTCTTACATATGACAAGTATGGCAGCTTAATTATACACATACAACGTAAACATACAAATGTTAAAAAACCAGAAATTGGACAAGTGTATGAATGTATTTTTTGTCCAAAAGAATTCTCTAGAAGGGAAACTTATTCGAGACATGTGCAAAGAAAACATAGAGTTGTAGACGATATGCCAGAAAAAGTAGATGCAGATTTGGAAAGTTTTGTTAATGAGATAACTGGGGAAATTTCTTGTAAAGCATGTCCTTTGGTCTTTTCCTCTATAATGTCTTTAAAGTTACACATGAGGCGAAAGCATAATGCGTTAAAAGACAATTACAGATTGAAATGTCAGCTTTGTAACTTGTCTTATGACAAGGTCGAAAGTCTTAAACGTCATGTCAGACGGAAGCATGATAAGGGCTCATATTGTGAAGTATGCAATAAACAATTTGATACAAGAGAAATGTACTTAAATCACTCACATTCAAAAGTTGTGCATGAATGCTCATTATGTGGACTTATATTTGCTTCCCAAGGAGGTTTAGCTAAGCATCTGCGGTGTACACACAAAATGGACACTCCCAAAACTGTATTCTGTGATCTATGCAATGAAGGTTTTTATGAAAAACGCCAATTAAAACCGCATCTGATGAAAGTACATTTAAAAGCTACTTACACTTGTATGTACTGCAACAAAGTTTTTAAAGCAAAAGAGAGTTACCGAAGACATGTTACGTTTAAACATCTTGGTGATACTAGTGCTGCTGCTGTGCCACAGAAATGTGAGCAGTGTCCTGAAACTTTCCCTGATGAATTTGAACTCTGCAAACATATAAATATAGTGCATAGAGTTGAAGGTTTAGATGATAGTAtgcatataaaaaaagaaattgaaGATGTCAAAACCAATTTTCAATGTACTAAATGTCCTGAAGTTTATTTAACATGGGAGCAATTAAAAACGCATTTCTTGCAATGTCATAACACAACTCAGTGTCAGATGTGTGGTGAAATTTTACCGGGAAATGAGTTACATAAGCATATGAAGCACTGTACTAAAGCTCCTGATATGCAATGTAAATTTTGTGAATTTAAAACTAACGTTAAATTTAGTTTAACTCAACATATGCTGAGACATAAAAACGCTTCTACGTTACACTGCAACTATGAAGGGTGTAGATATAAAACGTATCATGAAGGTGCGATGGAGAAGCATAGTAAGAAGCATATTGAACAAGGTGTCAAACACCAATGTGCGCACTGTCCGTTTCAAAcgatgaataaatatattttgaaatatcACGAAGAAGCACATCAAACTGGTAAAAAACGGTATACGTGTGATCAGTGTGATTATGCAACAGTTTTACCGGCTAATTTAGTGCAGCataagttcaaacattcaacagAGAAACGATTTAAATGTGAAGTATGTCCATTTGCAACGAAATATAATACCTCGCTTAGGTTCCATGTGAAGAAAAAACACTGTGATCTCCCAACATTCAATTAA
Protein Sequence
MADNKVIINVKTERKDPTSYLPEEAMSYEIKSKKKKKKKKIKEDPFKDVDDNNVQITSVTREMSPTAFDPEVNIKAENIEVELDFNDFTDNSGLLLEGPYSDDSQEPAVKINQNNEATLLTFESVISGRHLLTPKREPHSPRTASHFCKICHLAFQTTKTLEMHQKRQHKIFRKFFEHICDYCGMAYETKNSLVAHIRRKHGPDSTPEDRDEKTCEICALVFKGTARLRMHMRRKHGAFEDSFKHVCDDCGLTYDKYGSLIIHIQRKHTNVKKPEIGQVYECIFCPKEFSRRETYSRHVQRKHRVVDDMPEKVDADLESFVNEITGEISCKACPLVFSSIMSLKLHMRRKHNALKDNYRLKCQLCNLSYDKVESLKRHVRRKHDKGSYCEVCNKQFDTREMYLNHSHSKVVHECSLCGLIFASQGGLAKHLRCTHKMDTPKTVFCDLCNEGFYEKRQLKPHLMKVHLKATYTCMYCNKVFKAKESYRRHVTFKHLGDTSAAAVPQKCEQCPETFPDEFELCKHINIVHRVEGLDDSMHIKKEIEDVKTNFQCTKCPEVYLTWEQLKTHFLQCHNTTQCQMCGEILPGNELHKHMKHCTKAPDMQCKFCEFKTNVKFSLTQHMLRHKNASTLHCNYEGCRYKTYHEGAMEKHSKKHIEQGVKHQCAHCPFQTMNKYILKYHEEAHQTGKKRYTCDQCDYATVLPANLVQHKFKHSTEKRFKCEVCPFATKYNTSLRFHVKKKHCDLPTFN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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