Basic Information

Insect: Nudaria mundana
Gene Symbol: -
Assembly: GCA_963556515.1
Location: OY748292.1:3333587-3341574[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.3 5.5e+02 2.6 0.8 1 23 91 114 91 114 0.94

2 18 1.5 1.9e+02 4.1 0.1 3 23 119 139 117 139 0.95

3 18 0.76 98 5.0 0.1 2 23 143 165 142 165 0.95

4 18 0.0075 0.97 11.3 0.2 1 20 429 448 429 450 0.94

5 18 0.89 1.1e+02 4.8 0.9 3 23 461 481 460 481 0.97

6 18 0.00022 0.028 16.1 0.8 1 23 529 552 529 552 0.97

7 18 2.7 3.4e+02 3.3 1.2 8 23 602 618 593 618 0.88

8 18 0.0013 0.17 13.7 0.1 2 23 629 651 628 651 0.93

9 18 2.2 2.9e+02 3.5 1.0 1 23 656 679 656 679 0.93

10 18 2.5e-05 0.0033 19.1 1.9 1 23 685 707 685 707 0.97

11 18 1.3e-05 0.0016 20.0 1.9 1 23 714 736 714 736 0.98

12 18 9.3e-05 0.012 17.3 2.3 1 23 741 763 741 763 0.96

13 18 0.0027 0.34 12.7 1.4 1 23 769 791 769 791 0.98

14 18 2.3e-06 0.00029 22.4 1.5 3 23 799 819 797 819 0.98

15 18 4.6e-05 0.006 18.2 3.6 2 23 826 847 826 847 0.98

16 18 0.00017 0.022 16.5 0.6 2 23 855 877 854 877 0.97

17 18 0.00011 0.015 17.0 0.3 1 23 882 904 882 904 0.96

18 18 0.0093 1.2 11.0 2.8 1 23 910 933 910 933 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.3	5.5e+02	2.6	0.8	1	23	91	114	91	114	0.94
2	18	1.5	1.9e+02	4.1	0.1	3	23	119	139	117	139	0.95
3	18	0.76	98	5.0	0.1	2	23	143	165	142	165	0.95
4	18	0.0075	0.97	11.3	0.2	1	20	429	448	429	450	0.94
5	18	0.89	1.1e+02	4.8	0.9	3	23	461	481	460	481	0.97
6	18	0.00022	0.028	16.1	0.8	1	23	529	552	529	552	0.97
7	18	2.7	3.4e+02	3.3	1.2	8	23	602	618	593	618	0.88
8	18	0.0013	0.17	13.7	0.1	2	23	629	651	628	651	0.93
9	18	2.2	2.9e+02	3.5	1.0	1	23	656	679	656	679	0.93
10	18	2.5e-05	0.0033	19.1	1.9	1	23	685	707	685	707	0.97
11	18	1.3e-05	0.0016	20.0	1.9	1	23	714	736	714	736	0.98
12	18	9.3e-05	0.012	17.3	2.3	1	23	741	763	741	763	0.96
13	18	0.0027	0.34	12.7	1.4	1	23	769	791	769	791	0.98
14	18	2.3e-06	0.00029	22.4	1.5	3	23	799	819	797	819	0.98
15	18	4.6e-05	0.006	18.2	3.6	2	23	826	847	826	847	0.98
16	18	0.00017	0.022	16.5	0.6	2	23	855	877	854	877	0.97
17	18	0.00011	0.015	17.0	0.3	1	23	882	904	882	904	0.96
18	18	0.0093	1.2	11.0	2.8	1	23	910	933	910	933	0.95

Sequence Information

Coding Sequence: ATGGCGTCTGACGATTCAGATGATGAACCGCTGTCCACAATCGCTACGAATAAAAAACTGCACCCTGAAGCTTTTGTCGATGTCGAAGAAATTTTGACTTCATATGGAACAGAAGTATCGTTAATtacaaagaaaaagaaaaataaattgttaccTAAACGGCTTCCTGTTACGATTAAACTCAACAAGAATGTGAGTCAACAGCCGCCTGTAATAGATCGTCCTGCTGATGTGTGGCTTTATCTCAAGGATTTTAACCCTGCAGGACCATACAGTTGCTTATTGTGCCCTGAGTGGTTTATAAATCGATCTAAGATAATACTACATTACTGCCTCAATCATAAAAAGGATTTTTGTGGTATTTGCAGGTACTTTGTGCCAGATCGGGAATCTTGGTGGAACCACGTTAAGTTCCACACACCATGGCCGTGCTCACAGTGTATAGAGAACTTTAGTACGGAGTCTATTTTACGTTCCCACCTCAGTACAGTCCACCAATTGGTACACTGTAGACTCTGCCATTTTAGAGTTTCTGATGGTGATCTCTACCACTcacatttattccaaaaacacagTGTCCTAAATGTTGCCAACAAAGATGAAGATATTTTATGGACTTTGGATTATGAGGGGAGCACAACTTTCTCATGTTTACTTTGTTCAAAAAGTGATACTATCTTAAGGTTCTTCAATCACTACATGGGCAATCACCATTTTACTATAAAATGCTTCACACATATACTAGCAGGTAAAGATCTACCATTTGTTGTGCACGGAGCTGATGTTCGTAATGAATTCATTGAAGAACAGTTGAAACGCCATCCACGGTATGGCTATGTGGAACTAAAGACTCAAAATAGTTTGTCTCCTACGTCTAATACTGATGACACAAAAGAGTTTCTTAAAGCGTTACTACCAGTACTTAAGCAGGAGAATGTAAGTGATGAAGACGGAAAGACAAAGAAAGAAGATGATAATGGTTTCAAGGGGGAGGGAGATGTGAAGTTTGATGAGTCTGTGAAGAACTATGAGGGGGATGAAGACTATGATGTAACATTAACTGAATTAGTTATTTTAGAAAGATGCTACTTTGACTATATTACTCAAGTATTGTCAgatatcaaatcaaataaagcACATGTAAATTCTAATATTAACTATGAAAAGTTAACAATTGATTTAAATATGAACATAACTTGCCTTTTATGTAATCTAGAACTTAATAATGTGTCTGTGTTTGTCATGCATATGACGAGGATGCATTCTGTAAAATATAAACCTGTATATTCTTGTAGAGTTTGTACAGCAACATTTGATACACAGAGTGACCTTGATAACCATGTCACTCAGGAGTTGAGTGATTTCAATGGCCTTTGGCTGTGTCAGTTCTGTGATGATGAATTTACAGACAGACCTACTACACGGAAACATTTAAAGGAACATTGGGATTTGTTAGAATATGACAACTGCTTTAGCCCACATTTAGGGTTTAAATGTATGTTTTGTCCAACATTGTTTTGGCATGAAAACAATCGTCATGTTCATCAAATGAAAGTTCATTATACGAAGCACATAGATTGCTATTACAAATGTGAAGTCTGCAATGAGGTGTTCAGTGATAAGATCTGGTTCACATACCACTACTTGTCCCGCCACACTACGGCAGATAAAATCCCTCTCTACCTTATGAAGTGCACAATATGTTGCTTGGTCCTGCCTAATGTTGACGAAATGAGGGCACACTTCAAAGGAGCACACCCAGAAGCTAAGAAGTTGTATTGTTCTTTAGGCTCTTGTAGATATAAACCGTTGAGTCACAAGAAGAGTTTTAAACTTCACTTACGGACAGTCCATGGTCCCAGACCACGAGTGGAACGTAACATGGAGTGTACAATTTGTGGACGAGGGTTCAGTACCTCGAGGGCAGCAAGCTCTCACATGGCTCAAGCGCATGGACCTGGCAAGTTCAAGTGTAAGCTTTGCGAGGAAGTACTACACACTATTGACGAGAGAAAACTCCACTACCTCATCTCCCACCCCGGACAGCATCCATTCGAGTGTACGGACTGTGGCAAGTCGTTCCAGTACAAGTCGTCCCTGTATATGCACAAACAGGAGCATATGCCTAACAAACAGAATTACACATGCACTTATTGTGGGAAGACTTTCATGAAACGCGACTCGTTCCGGGAGCACGTGCAGATCCACGAGGGCCCGCGCCACGCGTGCTCGTACTGCCCCATGCGCTTCGTGCAGCGCTCCAACATGCTGCGCCACGAGCGGCGCCACACGGGCGAGCGGCCCTACGCGTGCGCTCACTGTCCGCGGAGCTTCGCCGACAAGGGAGCCTGCAACTCGCACGCCAGAACACATTTAAGGGATACGTCATTCGGCTGTATGTACTGCGGGAAGACTTTCGTGCAAAAATCAAAACTGACATATCATATAAGGAAGCATACAGGCGAGAATCTAGAAACGTGTACAGTGTGTTCGAAGATGTTCACAAGTGCTTGCTCGCTACGGGAACACATGAAAACTCATGTCAATAAGACAAACACAGTCAAATGTCCACTTTGTGAGCGCACGTACACGGACGAGCGCTATATGCTGCGACACCTGCGCACGTCGCACACGCACGCCAGCCACGCGTGTCCGCTCTGTGACAAGGTGCTGTCGAGCCCCGCCGGCCTCAGGCATCATGTCATCACACATACCGAACTCAAGACATTCCGGTGCAAACTGTGTCCAAAAGCGTGTTCCGTAAAAAGAACAATGATGAGACACCTCGGTAGAAGGCACGCCTTCAAAGGCAACGAAACCAATATGAAAGATTTCTACACAAGATTAGAACCGAGAGAATGCAACCTTGGTCTCGATGAAGAAGTTATGACCAACATATTTGGACCTCCAAAACCAACTGTCGGTGATTTCATTGGGGATTATGATAGTCTTTCTAATTTGGAAAAACATAAGAAAGATTTTGAGAAAATGCGAGCCGCAACTAACGTCGAAACTGATGAGGACATGTCAAAATCTGAGTCCGAAGACTCGAGAGAGAGTGAGAAGGACAATGAAAATTCTGAGTGTGAAAAAGAGACAGTTATAGATACGCATATGGTTAAAATTGAAGTGAAGGAGTATAATAGTGAGGCGGAACATGAACTTGAACCTACTGATTTTGTCAGTGTTAAAATTGAACCTTTGGATGAAGAAGATATGGATATGAATTAG
Protein Sequence: MASDDSDDEPLSTIATNKKLHPEAFVDVEEILTSYGTEVSLITKKKKNKLLPKRLPVTIKLNKNVSQQPPVIDRPADVWLYLKDFNPAGPYSCLLCPEWFINRSKIILHYCLNHKKDFCGICRYFVPDRESWWNHVKFHTPWPCSQCIENFSTESILRSHLSTVHQLVHCRLCHFRVSDGDLYHSHLFQKHSVLNVANKDEDILWTLDYEGSTTFSCLLCSKSDTILRFFNHYMGNHHFTIKCFTHILAGKDLPFVVHGADVRNEFIEEQLKRHPRYGYVELKTQNSLSPTSNTDDTKEFLKALLPVLKQENVSDEDGKTKKEDDNGFKGEGDVKFDESVKNYEGDEDYDVTLTELVILERCYFDYITQVLSDIKSNKAHVNSNINYEKLTIDLNMNITCLLCNLELNNVSVFVMHMTRMHSVKYKPVYSCRVCTATFDTQSDLDNHVTQELSDFNGLWLCQFCDDEFTDRPTTRKHLKEHWDLLEYDNCFSPHLGFKCMFCPTLFWHENNRHVHQMKVHYTKHIDCYYKCEVCNEVFSDKIWFTYHYLSRHTTADKIPLYLMKCTICCLVLPNVDEMRAHFKGAHPEAKKLYCSLGSCRYKPLSHKKSFKLHLRTVHGPRPRVERNMECTICGRGFSTSRAASSHMAQAHGPGKFKCKLCEEVLHTIDERKLHYLISHPGQHPFECTDCGKSFQYKSSLYMHKQEHMPNKQNYTCTYCGKTFMKRDSFREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACAHCPRSFADKGACNSHARTHLRDTSFGCMYCGKTFVQKSKLTYHIRKHTGENLETCTVCSKMFTSACSLREHMKTHVNKTNTVKCPLCERTYTDERYMLRHLRTSHTHASHACPLCDKVLSSPAGLRHHVITHTELKTFRCKLCPKACSVKRTMMRHLGRRHAFKGNETNMKDFYTRLEPRECNLGLDEEVMTNIFGPPKPTVGDFIGDYDSLSNLEKHKKDFEKMRAATNVETDEDMSKSESEDSRESEKDNENSECEKETVIDTHMVKIEVKEYNSEAEHELEPTDFVSVKIEPLDEEDMDMN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -