Basic Information

Gene Symbol
-
Assembly
GCA_963556515.1
Location
OY748308.1:11894017-11896539[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 5.6 1.2e+04 -2.2 0.0 22 33 286 298 283 302 0.78
2 5 5.1e-10 1.1e-06 29.9 0.3 2 45 318 363 317 364 0.93
3 5 1.2e-08 2.6e-05 25.5 0.1 2 46 371 419 370 419 0.93
4 5 7.1e-10 1.5e-06 29.5 0.0 1 43 423 465 423 467 0.97
5 5 0.0032 6.9 8.1 0.0 3 45 475 519 473 520 0.88

Sequence Information

Coding Sequence
atggaCTGGTCAGTCCAAGCAGAAATAATTTATGATAGTGACGACGACGAGAACGAGATACGACAACTCAACGCCGTGTTAGAGGAAGCCGATATAGAAATTTGCGATACAGGTGTGCTCAAATCCCCAAAATGGAGTTGCGCCAGTTCTACGTCTCAACAGATGCTTTCGCCGCGTCCTCCTGAGCCTATGTGCTCCGCTCTCTCATTAGATGCTATgctacagacacaaatcactcCAGGTACTTCTATTGAAACATCTAATTTATGTATCTCCGGTTCTGCGTTGCCTACAGCATCTTTATCCCACACTCCGCTTCCATGCAATTCAAGCCCGCAACTACAGGAAATATCTACAATAGACTCCTTACTGGCAATCAATAAAGTGTATGATGATAAACTACGAACCCTTGAAAGGATCCTAAGTCTTCGTTTAAAAGAATGTCGCATTAAAATTGATGAAATTCAAAAGAATAATTCTCAGGCTAATAAAGTTGAAGTGTTTCGCTACATTAACTGTGGTAGACCTTACTTTAGAGATGAAAATAACATGGCAGCACCTGATAATGAGGATACAATTATGACAAAAGCCCAGATGTATGATTTCTCCACAATATCATGTGTGCCAGGATGGACGTTCAGAGACAAAAATCAATTTACAAATGTGATGACCCAAGTGTCCTTGTCATTGAGAAAAGATGAGTATACCAAAAAAATTCATGAATTAGAACATTCAGTGCCAAGTAATAAGAAGAAACTAATAGAGAAAGAggtaaataaacttaaaaaagaaAAGGATAGTTTAAATGCAAAAATGCCTTTAGTAGAGTTGGCACTTCCATTAGACCAGGAGTACGACTGGGAGTCACTAGCTCATAAGTTCAACAGACGTCATACACCACATGAGTACCGTTGTCTCTGGAAGTTGTACTTTCATCCTTCAATCAATAAAACTACTTGGAAAACCAGCGAACATGTCTCTTTGCAGAAACTTGCAGCTGAGCATAATAATCAAGATTGGGATGAAATTGCTAGAAAACTGAATAAAGGCAGAACTGGCTACCAGTGCTTTGTGTATTATCGCACAAATATGTCAAATATATGCATTGGAAAGAAATGGACTCCAGAAGAAGTTACTTATCTAAGAAGATTAATTGACTATTTTAAAGAAGACCAGTACATTCCGTGGGGTAAAATCGCTGCAGCGATGGAAAACAGAACAAAAGTTCAAatctataacaaatatttgcgGATGCTTGAGCAACGGAAAGGGAGGTTTCTGCCAGAAGAAGATGCTGTTATTCTTAACTGTGTGCAACGATTTGGACCAAATTTTAAAAGATTAACTGAATACCTTTCACATAGGTCCATGGTTCAAATACGTTCTAGATATCATGTACTCAATAAATTGAGGGTTTCTACAGTATGGTCAGTTGAAGATGACCGTAAACTCATTCAAATAATGAGTAATCAGGACTCAAACACAACATTTGCTATGGCAACAAAATTCTTCCCTGGAAGGAATAGGATAACCATAAGGTCTCGATATATGACCTTAGTAAAATGGATGAAACGCAATCCTTATGCAGATATTGAACTGGCACCAAGAAGGGGTGCACGTCGCCTCAATCACGGACAAGCATCTGATGACTTGAATAAAGCCATTGAGAATTTAAAAAACATATTAAACATGGAGGTTGAAATAAAAAAGGATCGTAAGAAAATCACAAGAGATTCTGATGAAGCAGATATAGAAGGTGCAATAATTGCAACTCTTATTAATGAAAAAATTCGTGACCAAGAACAGAAGAAATCTGCCTATGAAGGTATGTTGGTTATGCCTAATGAAGCCCTTGACACTACTAAGGCATTAAATTTAACAAACTTGCGCAACTGCCTTATATTTTTAAGTTCAAACTTAAACCGAGGACTATTTAAAGAATCTCAATACAAAGATGATTACTATAATTTCGGCGAGTCAGATAATCCTGTAAGTATAAAAGTAAAGTCCTATTCTAGAAAAAATACAGTAAAAACTATTCTGATGTCGAATAGCCCAACTGTGTGGGGGAATAATGTTCTTAATTCGCGTAATTATGTTTTACCACCGCACTATGCAACCATTACAGGGTGTAAAGCTTTGATGTCACAAGTAACAGCATACGCTATGTATTACAATTCCGTCAACTTACATATTCTCGTTCGAAGGAATTCGGAATTGAAAGACCTAATGGAGCAACTGTTGGATAGGTTCTTCATACTATTTGTGTGGCCAATGTTACTTTCCAATGAAGGACCCCATGACTTTCACAATTCAAAATTATGTaaaggtgattttttttatgttaagcAAACACGGAAAGGTTTAGATTTACCTCAAACACCTCTAGTAACAATAAGAAcgaatcatttaaaaaaatatggcaattatGATGAATCAAAAGAAATAGACTTGTCTGAACATGCATCAGGCAACCACCAGGTTAATATTACTGAAATTATAGACAAAGACAATATTAAGTGA
Protein Sequence
MDWSVQAEIIYDSDDDENEIRQLNAVLEEADIEICDTGVLKSPKWSCASSTSQQMLSPRPPEPMCSALSLDAMLQTQITPGTSIETSNLCISGSALPTASLSHTPLPCNSSPQLQEISTIDSLLAINKVYDDKLRTLERILSLRLKECRIKIDEIQKNNSQANKVEVFRYINCGRPYFRDENNMAAPDNEDTIMTKAQMYDFSTISCVPGWTFRDKNQFTNVMTQVSLSLRKDEYTKKIHELEHSVPSNKKKLIEKEVNKLKKEKDSLNAKMPLVELALPLDQEYDWESLAHKFNRRHTPHEYRCLWKLYFHPSINKTTWKTSEHVSLQKLAAEHNNQDWDEIARKLNKGRTGYQCFVYYRTNMSNICIGKKWTPEEVTYLRRLIDYFKEDQYIPWGKIAAAMENRTKVQIYNKYLRMLEQRKGRFLPEEDAVILNCVQRFGPNFKRLTEYLSHRSMVQIRSRYHVLNKLRVSTVWSVEDDRKLIQIMSNQDSNTTFAMATKFFPGRNRITIRSRYMTLVKWMKRNPYADIELAPRRGARRLNHGQASDDLNKAIENLKNILNMEVEIKKDRKKITRDSDEADIEGAIIATLINEKIRDQEQKKSAYEGMLVMPNEALDTTKALNLTNLRNCLIFLSSNLNRGLFKESQYKDDYYNFGESDNPVSIKVKSYSRKNTVKTILMSNSPTVWGNNVLNSRNYVLPPHYATITGCKALMSQVTAYAMYYNSVNLHILVRRNSELKDLMEQLLDRFFILFVWPMLLSNEGPHDFHNSKLCKGDFFYVKQTRKGLDLPQTPLVTIRTNHLKKYGNYDESKEIDLSEHASGNHQVNITEIIDKDNIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-