Nmun026910.1
Basic Information
- Insect
- Nudaria mundana
- Gene Symbol
- -
- Assembly
- GCA_963556515.1
- Location
- OY748304.1:20672-22332[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.041 19 6.4 0.0 31 45 9 24 5 24 0.91 2 2 2e-18 9.1e-16 58.6 0.0 1 43 31 74 31 75 0.96
Sequence Information
- Coding Sequence
- ATGTATTGTGTTAATATAATTTCAGGAACACTCTACGGCCGATGTAAGCGCGAAGGTATAGAGTTGTCCCGTTCCAATCCCACTCCGTGGTCCGAGGACGCTATGGGAGAGGCGCTTGAAGCAGTCCGGGTCGGTCAGATGTCAATAAACCAGGCTGCGATACATTTCAACCTACCTTACTCCTCTCTTTACGGTAGATTCAAGAGATGCCGGTACGAAACACAGggcATTCCGCAATCTCAATTACAGCAACAAGACCATCAAATGACAGATGTAGACATCCCACAAAACGAGGTTCACCAACATTACCACCAAGTTCCAACCACATTGGACCTTGATCCGCCAATATACGCCAACATGGCCCAATACTCACACATACAAACCCACGACCAATATGGTCAATATTACCAACCTTTTAGCAGTATAGCGACCAGCTGA
- Protein Sequence
- MYCVNIISGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHFNLPYSSLYGRFKRCRYETQGIPQSQLQQQDHQMTDVDIPQNEVHQHYHQVPTTLDLDPPIYANMAQYSHIQTHDQYGQYYQPFSSIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -