Basic Information

Insect: Nowickia ferox
Gene Symbol: -
Assembly: GCA_936446695.1
Location: CAKZFO010000070.1:6937659-6941255[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 6.7e-06 0.00065 21.0 1.8 1 23 503 525 503 525 0.97

2 4 0.0001 0.0098 17.3 0.6 2 23 534 555 533 555 0.97

3 4 7.4e-06 0.00072 20.9 0.8 2 23 563 585 562 585 0.96

4 4 0.00099 0.097 14.2 2.3 2 21 593 612 593 613 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	6.7e-06	0.00065	21.0	1.8	1	23	503	525	503	525	0.97
2	4	0.0001	0.0098	17.3	0.6	2	23	534	555	533	555	0.97
3	4	7.4e-06	0.00072	20.9	0.8	2	23	563	585	562	585	0.96
4	4	0.00099	0.097	14.2	2.3	2	21	593	612	593	613	0.93

Sequence Information

Coding Sequence: ATGGATGATGGTGAATTTAATCTATCGAATACTATCGGTATCGGTTTGAATATTGGCGAACAAATGATGTTGCCGGTTGCGAATGGTGCAGAAGAAGCAGAATTTGTtttgcaacagcagcagcaacttcAGCGCCAGCACGAGCAGCACCTTCtggagcaacaacaacagcaagagcaacaacaacaacaacaacagcatcagcagctacagcagcaacaacaagtcCATTATGACTCGCATATAACTGTGGATCAACAAGCCGCCGCAAATATCAACAATTGCCcagacacaacaacaacaacaacaaatgtcACCTGTCTGGACAATTCTATTGGAAATTTTTACCAAGAGaatactGAACTAGAAGACTTAAATGCTAAACTGGTAGAAACCACGAAAATACTTGACTACACGCCAGCAGTAGAAACGACAGAGTTGCTGACGAATGCTTTACCGGAAGAGAACGCTGAAAAATTAGTTGTAGAAGAACTTGGTAGCATTACtaagaaaagtgaaaataaagaaaaatcggAAGAGAAGGGAAAAGAAGATAAAGAAAATGCAGACGGAGAAGAAAATGCAGAAGAGATAGAACCAGAACCAGAACGAGAATCAGCACAAGATGCAGAACAAGAAGAAGATGAAGCCGAAGAAACAGAGGCCGATGAAGAGGTTGAAGAAGTGGTGGAACAGGATGATGACGAAGTTGAGGAAGAAATCATAGTGCCGGAAAATTCCCAAGATGCAGTGAAGCATATAAAAGAAGTCAAAGACACTGCAGCGGAAGAAGACGATGCAGCAGAAGACAACAACAAAGAGGCCGAAGAAAATGAGGACGAAGAAGAGGAGGAGGAGGAAGAAGAAGAACCTGAAGAGCCTAGCAGTACTGCCAGGCGCGCCAGAAGAACGGAGGAGGAAATCGATGAGAATCAGTGTCGTGTGTGTTGTGCTAAGGAAAATCTAGTgagtattttcaaaaaaatcgaGGAGCGCACCGTGGCCGATTTACTTATGACCATTTGCCCCTCGGTGTCCATCGTTATCAAAGACTTCCTACCGCAATACATTTGCAATAGCTGCTGCGATAATGTAACCATTGCCATAAGCCTAAAAAATCAGTGCGAAACTACCGAAAAGGAGTTTAGAAAGAAACTTTCGAGGCACAAGAATAAAATTAGACGGCCAGTGGGCTATGTGGTCATCGATGCACCACTCGACTCCGATCCTCCTACCGACGAAGAGCCAGCCAATGACGAAGAATTCAAGGTCTCAGATATAGCAAGTGCCACGCCCAGTGAAGATTCGGAAAGCTCCGATTTTAGCGACAGCAAAAGGAGAAAACGTGGCCGCAAACGCAGAAAATCGGCTGTGGTTACACCCACAGAGGGCAGAAAATCtaagaataaaaacaaatctGATGATCACTCCTCCGGGGAAGATGAAGATGACGGCGATCCTATAAAACAGAAACGCAAACGTTCCACCAACTCCTCGCCGGAAAACTTCAACTGCAATGAGTGCGGCCAAAGCTTTACGCGCAAACAGTCGTTAGTTCTGCATAAGCGACAACACACTTATGATCGCGGCGAGCCCATCAAATGCGAAGTGTGTGGCAAAAAGTTCAAAATCAAAGGCGCCTATCGCACCCACTTGGAAAAGCACAAGGAGGAAAGACGTGCCAATAAATGTTCCCAATGCTCGAGACGTTTTGCCAGCAGCTCGGATCTCAAGCGTCACATAGCGATGGAGCACAAAGAAAAGCATATATTGCCCACATGCTCCAAATGTCATCGTACATTCTCCTCGGCTGGCCGTTTACAGCGCCACAAACAGAATGGTTGCAGCATAATCGATGCCACGAAAGTTAAAAGGCCCGAAACGAGTTCATTTGTGGTGGGCACGGATCTTTTTAAAGCTGTCGCACCCCTACAATCCACCTACTGGAGTGACAGCTTCTCCGATTAA
Protein Sequence: MDDGEFNLSNTIGIGLNIGEQMMLPVANGAEEAEFVLQQQQQLQRQHEQHLLEQQQQQEQQQQQQQHQQLQQQQQVHYDSHITVDQQAAANINNCPDTTTTTTNVTCLDNSIGNFYQENTELEDLNAKLVETTKILDYTPAVETTELLTNALPEENAEKLVVEELGSITKKSENKEKSEEKGKEDKENADGEENAEEIEPEPERESAQDAEQEEDEAEETEADEEVEEVVEQDDDEVEEEIIVPENSQDAVKHIKEVKDTAAEEDDAAEDNNKEAEENEDEEEEEEEEEEPEEPSSTARRARRTEEEIDENQCRVCCAKENLVSIFKKIEERTVADLLMTICPSVSIVIKDFLPQYICNSCCDNVTIAISLKNQCETTEKEFRKKLSRHKNKIRRPVGYVVIDAPLDSDPPTDEEPANDEEFKVSDIASATPSEDSESSDFSDSKRRKRGRKRRKSAVVTPTEGRKSKNKNKSDDHSSGEDEDDGDPIKQKRKRSTNSSPENFNCNECGQSFTRKQSLVLHKRQHTYDRGEPIKCEVCGKKFKIKGAYRTHLEKHKEERRANKCSQCSRRFASSSDLKRHIAMEHKEKHILPTCSKCHRTFSSAGRLQRHKQNGCSIIDATKVKRPETSSFVVGTDLFKAVAPLQSTYWSDSFSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01397955;
90% Identity: iTF_01397955;
80% Identity: -