Basic Information

Insect: Nowickia ferox
Gene Symbol: -
Assembly: GCA_936446695.1
Location: CAKZFO010000027.1:5068763-5088615[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.9 2.8e+02 3.3 0.1 3 21 60 78 58 79 0.93

2 18 0.0084 0.83 11.2 0.9 1 23 220 243 220 243 0.94

3 18 1.5 1.5e+02 4.2 0.9 2 23 250 272 249 272 0.95

4 18 0.076 7.4 8.2 0.6 2 23 303 324 303 324 0.95

5 18 0.011 1.1 10.8 1.9 1 23 401 424 401 424 0.97

6 18 1.4 1.4e+02 4.3 2.5 1 23 431 453 431 453 0.98

7 18 0.012 1.1 10.8 0.3 2 20 509 527 508 530 0.94

8 18 0.04 3.9 9.1 1.7 1 23 603 626 603 626 0.94

9 18 0.0083 0.82 11.3 0.2 1 22 633 654 633 654 0.96

10 18 0.00049 0.048 15.1 2.6 3 23 723 743 721 743 0.94

11 18 0.0038 0.37 12.3 0.1 2 20 770 788 769 790 0.94

12 18 0.00024 0.024 16.1 3.4 1 23 836 859 836 859 0.97

13 18 0.0059 0.57 11.7 0.9 1 23 896 919 896 919 0.97

14 18 0.0027 0.27 12.8 1.4 1 23 993 1015 993 1015 0.98

15 18 0.00022 0.022 16.2 3.8 1 23 1021 1043 1021 1043 0.97

16 18 0.00069 0.068 14.7 0.4 1 23 1051 1073 1051 1073 0.99

17 18 9.9e-07 9.7e-05 23.6 1.9 1 23 1079 1101 1079 1101 0.98

18 18 0.039 3.9 9.1 1.8 1 23 1107 1129 1107 1129 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.9	2.8e+02	3.3	0.1	3	21	60	78	58	79	0.93
2	18	0.0084	0.83	11.2	0.9	1	23	220	243	220	243	0.94
3	18	1.5	1.5e+02	4.2	0.9	2	23	250	272	249	272	0.95
4	18	0.076	7.4	8.2	0.6	2	23	303	324	303	324	0.95
5	18	0.011	1.1	10.8	1.9	1	23	401	424	401	424	0.97
6	18	1.4	1.4e+02	4.3	2.5	1	23	431	453	431	453	0.98
7	18	0.012	1.1	10.8	0.3	2	20	509	527	508	530	0.94
8	18	0.04	3.9	9.1	1.7	1	23	603	626	603	626	0.94
9	18	0.0083	0.82	11.3	0.2	1	22	633	654	633	654	0.96
10	18	0.00049	0.048	15.1	2.6	3	23	723	743	721	743	0.94
11	18	0.0038	0.37	12.3	0.1	2	20	770	788	769	790	0.94
12	18	0.00024	0.024	16.1	3.4	1	23	836	859	836	859	0.97
13	18	0.0059	0.57	11.7	0.9	1	23	896	919	896	919	0.97
14	18	0.0027	0.27	12.8	1.4	1	23	993	1015	993	1015	0.98
15	18	0.00022	0.022	16.2	3.8	1	23	1021	1043	1021	1043	0.97
16	18	0.00069	0.068	14.7	0.4	1	23	1051	1073	1051	1073	0.99
17	18	9.9e-07	9.7e-05	23.6	1.9	1	23	1079	1101	1079	1101	0.98
18	18	0.039	3.9	9.1	1.8	1	23	1107	1129	1107	1129	0.97

Sequence Information

Coding Sequence: ATGTGGAATGGATGTTTTATTAATGGAGTGCAGTATACATGTCGTACTTGCTTTGATCCAGGAGCAACAGTATATCCTCTGACAGGGGAGTGCAGCAACTCTCAAACTTGGCGAGATTTATTGACCGATATTCTTAAGTTAAAAACAAACGACGACGAGTTACTTCCAGAGACCATTTGTTCAAAATGTTTGGAGAAACTTATCAGTTACTACAATTTTATAGTTCATATTCAAAATGTGAATGAAAAGTACCACCAACTTTTGGCAAGTACCAAAAATTCTTCACAAAATTATGGTTTTGCCAGCAGCTCTAAGAATATAAAAGAATGTTTGGCAGTATCTGCCACTGCCTTGCCTTTGGATCAATTTGTTtcggaaattaagttcgaaGACGAACACCTTATGTCTTACGATGTTGTTTTAAATAACTATGATGGAAAAAACGAATCGAAAAAAGAAGATACTTGTGATTCTTTAATGGAAACTTTGGATGAGAATATTGAGTTCTCTTCAGATAAATTGCAATATCAAGaaagatccCAAAATGAAGAAATAAATCGAGTTCTTGAAGATGATATTAACAATTGTGATTCCGGAAACagAACGTATAAAAAACAATTCTACAAATACTTTCCAATCGAAAAAGTCAACAGTCATTTCGAATGTGGGGTGTGCAAAAGATCATTTCCTAGGCTAGAATCTTGTCGGAGGCATATAATTCTAGTACACTGCCAAGACAAATCGTTGTCATGCGGATTTTGCGGCATAAATTTGAGATGTAAGCCAAACTTAATTTCACATCTCAAACGTATACATCCAGACGAGTCAGTTGAATCCAATAAAAAGCAATTAGGTCGTTTATTTGGAGAACGTCTGTATAGCAAACCTCTTGTATTACCACGAGCGGAATGTAAGCTGTGTGGTTCTACTTTTATGGCTAAAAAACAACTTCTTCAGCACTTGGATAACCATAGTGAGGCCAGAACTCTTGATAGCTTAAAATTAAGCAGTGATATTACTCAGCGTTGGTTTTCAAATATAAGGGATTTGCAagatataaaaacaacaatatgcaAAGACATCcgagagaaaaattttttcaaatattatacaattttaaatgaattttcctATGAAATATCCATTAGTGATACGGATGCAGAAGACTTGGAAGAAGAAACAGAAACACCTGCCAACAAATATAAATGCGAATTGTGtgcaaaaggttttttttacaaacatcaAGTATTTGCACATTTGAGAGAGGATCATTTGAGCGAAAAAATTCCGTTCAAATGTAGCCGTTGCAAATTGGAATTTATAtctacaaaaatatatgaacaacACAGACAAACTCACTGCCGAAATGAACATAAACTACTGAGTTGTTCTAATTGTCCTGGCAAGTTTGTCTGgcacaaaaatatgaaaaaacacAATTGTGCtacgaaaatattaagtttgGAAAAATCTGAAAGTTATAATGAAGTAATGCCTTCACTGCCAAAAACTACCAGTGTCATAAGATGTGGTCTTTGtgaaattacatttaaaaaactgcGCGATTTACGACAACACATGCCTTTGCACGCCGATGGCAAAACTGGAGTTGACTTTGATGGTTGTATTTATGTAAATCAATTCGAAACTTCATCCAGAAATCGCGAATTGTTGCAAAAGAagattaaaaatgcatttacgAAACGCCAAATAAGTCAACTGTATCAAGCCATTGATAAGTACGGCAAAGAAATGGACATTTCAGATTCAGATAGCGATGAAGATGATGCTGATGGAGAAAAAAGCTATTTGTGCGAACTTTGCTACGCAACGTTTAAAAAGCTAAAACTGCTGTTTAATCATCAAAAAGAACGACACAAAGATGTTTCAATGCCTTTCACTTGCAAGGAATGTGAAACGCAGTATGTTAGTATTGACTTGTTACAACAGCATATAAAGAGGGAATGTTGGAATGAACATCGACGAGTTGCTGAACAATGCGATTGTTGTAAAGAGCGTTTTATATGGCCGGAAAACATGTTGAGACATAGAGAAATACAGcgatacataaatattaaaaactcgGTGTCGGAGAACTTGCGTCGTATCCAGGTAGAAAAACTAATTGCTTCATCAAACTCAAGTGATAATGTCGAAATTCGTTGTTGTTTCCTATGTCCTAAGACTTTTTCTAATACTGATAATTTAAATGACCATTTGGATAGTCATCGGTTCACACCATCCACTATCAAAACTGTTGCAAGCACAATACATTCTGTATGGTGGCCAAACGGCAGAAAgctaataaaatgcaaaatatgtgACCAAGAATTTTCAAGTATGGCCGAATTAAATGAACactattctttaaaaaatctcaaaaacgtGTGTGGTGCCATGCAACATTCTTTGGATAATTACTCGATTACTAACCAAATGGGGTTTGAATTACATTTAGAGCTGGATTCAGAGACAGAAActgaagaaaatgaaaatatattgccATATAGATGTCGCATATGCAGTAAATCATTTAAGCGAAAATATCAAATATCTCAACATCAAAGTTCCATGCACAATTATGAATTGTTGCAACTCAAATGTGAACGTTGTTTTTTTAGAACCGTATCACAGAAAGTTTTAGATTATCATAAAGCAAGTCAGTGTTTTAATGTTGACAAAATGTACCAATGCGATCAGTGTAATTTCAAATTTATGTGGCAAGAGAACCTTGAAAAGCATATTTCGATATTTCATAGCTCAAAAGATTTCGTCAAAGCATTGGATGCGGGTAGCGCAACGATTTTAAATGAAGGAAGCAATATTAATGATCAATGCCTTGAACTACATCAAAACGATTCAGATGCAAGGGATTGCATTCAATCTAGAGATGTATGTAAATGTCCCATTTGTGGACATTTTATTACCAAAAAGAATTGTTCAGAACATTTAAGGAAACACAAATATGACAAATCTTACAATTGCGATTTTTGCGAAATGTCCTTTTTAACAAATGGCTCTTTAAATAGACACAAGCGCATGCATGCGGAACATCATCCTTTCAAATGCACGCTTTGCGAGAAACACTTCAGGCGGCAAGAAGATCTTCGTCTTCATAAACTTTTACACACCGGCAGAACCCATACGGGGTTCAAGTGCGATCTTTGTGATAAAATCTTTAAGGCGgaaaataatgcaataatacataGACGCACGCACTTTAGTGAACGTCCTTTTAAATGTACACTTTGCGAGAAATCCTTTACCAATCCAAGCAGATTAAGAGATCACATGCGCAACCATACTGGCGAACGTCCATATCAGTGCACTATTTGTCTGCAAAAATTTATGACTTCGTTCGTTTTGAAGAAACATTCGGTTACGCAtACAAACGAGGACGAGTTACTTCCAAATACTATTTGTTCGAAATGTTTGGGCAAACTTATCAATTGTTACGATTTTATACTTCATATTCAAAATGTGAATGAAAAATACCACAAACTTTTGGCAAGTGCCAAACATTCTTCACAAAATGATGGTCTTGCCAGCAGCTCTAAGAACATTACAGGAAGTTTGGCAGAATATGCCACTTCCTTGCCTTTGGATCGGTGCGTTTCGGAAATTAAGTTGGAAGACGAGGAACTTATGCCTTacgatattgttttaaatagcGATGAAAGAAGAATCGATTCGGCCAAAGGagTTTACAATATACGAGACGAGCTGGACGAGCTATTACAGAGTCTTAATTTGATTGAAGTTAAGCCTTATTTAAAGAAATCTCAAATAACATTcgaaagtttaaaatatttatcgcGAGACGATATTAAAGAAGCTATACCACCAATTGGGCTACGTGCTTGCTTTAGAGAAAAGTTATTTAGTTGGAGAAAAAGTCAGTACGGAATTGATGATGACGACTTACCTGCAACTGTTGCCAACAAAGTAGTCTCCTGGCTACAAAATAATAGGAATCTTGGATTAACATCAGCACCGACGTCATCAACTTTTTCAACATTTATTGGAAACTCTAAGCTGTCAAAGagtCTTGAACTAATTTTGAAAGACAGCCTTAAAGGGAAAGCTATAACTAAGTATTATGAGAAAAGCAGTCGCTTGACAGATTTACTTCGTACAGATTTAATTAACATCATTTTAGAAGATATATTGTATCACGAAGTAAAACTATCACCAAAAGATTTTCCACCTATTGTCGACGAAATTATAGGCAACTTCCCttgtgaaataaaagaattttattttataccccGAGGTAAAAAGGCAAATCCTGGTGGTAAGCTTTGGGATAGATACGTGAATCAAAAATCAAAACGTGTACGCTTGTTGCGTAAGTTTGAAGACGAGGTGGACGTGTCGAATGAAAGTCCGGCGCATCCCGAAGTTGACGAATCACTATTGCAGGcattaaaaatttcactttcaaGAGATTTTTCAAATTGGGATGACGTTAAAGATAAATGGCAACGCACATTTCTTCTGAGGCAAAAAGAATTGAAATCTTCTAAaagcaattttgaatttttaagtgAATGGCCACTTTACTCTAATCCAAGATCTCTCGAACtagtaaattaa
Protein Sequence: MWNGCFINGVQYTCRTCFDPGATVYPLTGECSNSQTWRDLLTDILKLKTNDDELLPETICSKCLEKLISYYNFIVHIQNVNEKYHQLLASTKNSSQNYGFASSSKNIKECLAVSATALPLDQFVSEIKFEDEHLMSYDVVLNNYDGKNESKKEDTCDSLMETLDENIEFSSDKLQYQERSQNEEINRVLEDDINNCDSGNRTYKKQFYKYFPIEKVNSHFECGVCKRSFPRLESCRRHIILVHCQDKSLSCGFCGINLRCKPNLISHLKRIHPDESVESNKKQLGRLFGERLYSKPLVLPRAECKLCGSTFMAKKQLLQHLDNHSEARTLDSLKLSSDITQRWFSNIRDLQDIKTTICKDIREKNFFKYYTILNEFSYEISISDTDAEDLEEETETPANKYKCELCAKGFFYKHQVFAHLREDHLSEKIPFKCSRCKLEFISTKIYEQHRQTHCRNEHKLLSCSNCPGKFVWHKNMKKHNCATKILSLEKSESYNEVMPSLPKTTSVIRCGLCEITFKKLRDLRQHMPLHADGKTGVDFDGCIYVNQFETSSRNRELLQKKIKNAFTKRQISQLYQAIDKYGKEMDISDSDSDEDDADGEKSYLCELCYATFKKLKLLFNHQKERHKDVSMPFTCKECETQYVSIDLLQQHIKRECWNEHRRVAEQCDCCKERFIWPENMLRHREIQRYINIKNSVSENLRRIQVEKLIASSNSSDNVEIRCCFLCPKTFSNTDNLNDHLDSHRFTPSTIKTVASTIHSVWWPNGRKLIKCKICDQEFSSMAELNEHYSLKNLKNVCGAMQHSLDNYSITNQMGFELHLELDSETETEENENILPYRCRICSKSFKRKYQISQHQSSMHNYELLQLKCERCFFRTVSQKVLDYHKASQCFNVDKMYQCDQCNFKFMWQENLEKHISIFHSSKDFVKALDAGSATILNEGSNINDQCLELHQNDSDARDCIQSRDVCKCPICGHFITKKNCSEHLRKHKYDKSYNCDFCEMSFLTNGSLNRHKRMHAEHHPFKCTLCEKHFRRQEDLRLHKLLHTGRTHTGFKCDLCDKIFKAENNAIIHRRTHFSERPFKCTLCEKSFTNPSRLRDHMRNHTGERPYQCTICLQKFMTSFVLKKHSVTHTNEDELLPNTICSKCLGKLINCYDFILHIQNVNEKYHKLLASAKHSSQNDGLASSSKNITGSLAEYATSLPLDRCVSEIKLEDEELMPYDIVLNSDERRIDSAKGVYNIRDELDELLQSLNLIEVKPYLKKSQITFESLKYLSRDDIKEAIPPIGLRACFREKLFSWRKSQYGIDDDDLPATVANKVVSWLQNNRNLGLTSAPTSSTFSTFIGNSKLSKSLELILKDSLKGKAITKYYEKSSRLTDLLRTDLINIILEDILYHEVKLSPKDFPPIVDEIIGNFPCEIKEFYFIPRGKKANPGGKLWDRYVNQKSKRVRLLRKFEDEVDVSNESPAHPEVDESLLQALKISLSRDFSNWDDVKDKWQRTFLLRQKELKSSKSNFEFLSEWPLYSNPRSLELVN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -