Basic Information

Insect: Nowickia ferox
Gene Symbol: salm
Assembly: GCA_936446695.1
Location: CAKZFO010000099.1:3797173-3807057[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 6.9e-06 0.00068 20.9 0.9 1 23 543 565 543 565 0.98

2 7 1.4e-05 0.0014 20.0 2.1 1 23 571 593 571 593 0.98

3 7 0.023 2.3 9.8 1.5 2 23 954 975 953 975 0.98

4 7 9.8e-08 9.7e-06 26.8 0.5 1 23 981 1003 981 1003 0.98

5 7 0.0003 0.03 15.8 2.3 1 23 1013 1035 1013 1035 0.98

6 7 0.05 4.9 8.8 3.1 2 23 1403 1424 1402 1424 0.97

7 7 3.8e-08 3.8e-06 28.0 1.3 1 23 1430 1452 1430 1452 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	6.9e-06	0.00068	20.9	0.9	1	23	543	565	543	565	0.98
2	7	1.4e-05	0.0014	20.0	2.1	1	23	571	593	571	593	0.98
3	7	0.023	2.3	9.8	1.5	2	23	954	975	953	975	0.98
4	7	9.8e-08	9.7e-06	26.8	0.5	1	23	981	1003	981	1003	0.98
5	7	0.0003	0.03	15.8	2.3	1	23	1013	1035	1013	1035	0.98
6	7	0.05	4.9	8.8	3.1	2	23	1403	1424	1402	1424	0.97
7	7	3.8e-08	3.8e-06	28.0	1.3	1	23	1430	1452	1430	1452	0.99

Sequence Information

Coding Sequence: ATGTGTATGCATGCAGCAACAAACCAACTGAGTAACAGTTACAGCAACGGCCACAGCAACAAAACGAAACCAAAAAAAGGCCTCAAACGATTAAGTCATACATATGCCAATAGaccaaaaattaacaaagatgCCGTAGCAAGCACAGCAAGCaATTCAGCCAATGATCATGAGGAGAATGGTACATGTTCACCTTTGGCTGCCACAACCGCCAATGAAGATAATGATTGCGATAGAGCAGAATTAACGCATATGGTTGCTGGTAATGAACACgttaataaaattaacacaacaccCGCTGACGCCGCCGATAAAGAACAGACTTGTGCGCCCGGCCCAGTAACAGGAGAAGAAGATCTTAATCATAATAACAACATTGTAATGCCTTTGGAAGAGCAACAGCAATCCCTgccacaacaacagcaacagcagcagcaacagcagcaggaGTTAAAGATACCATCTCCAACACTAAAAGAAGATTTAAATGCGGCTTTAGCACCTTCCAAAACATATCCAAAGGATGAAGAGTTTCCCTCACCCACCCCACCCGATCTCAACGAGAGTCAAGAACCTTTGAGAAAAGCCCAAGAAGCCAGCGAAGAAGCTGGCGAAGCTGAGCCGTCCACACAAGACgatgaaaaagaaaacttaaaaacaacCGACAATATGTGTTTGCCTTCAAGTAAATCGGAAGCAGCCAACAATAAGGATCAGTTAAGCccacaagaaaaacaagaagaaaatgaaaacaatCAAACCTCACAAATGGAATTGGAGGAAAGTCCAGCAGCAGGAAATGCTGAAAAAGCACTCAATAAAGACTTGGAAACAGATGGCATGCAGCTAGAATCTACAACTCCCTCTTTGCCTGCCTCCTTAGCCCAACAATTTGGTGCTGCACCTGTCAATATTGAAGCTATTAAAAATATGCAGTTGGCTATTGCCCAAGTGGCTGCCAAAACCATAGCCAATGGTGCTTCCGGTCAGGACAATGAAGCGGCCGTGAAACAGCTGGCCTTCTTGCAGCAGACCTTATTCAATCTTCAACAACAGCAACTATTCCAAATCCAACTTATACAACAACTACAGTCGCAGTTAGCCATGAGTCAAACCAAGTCTAAAGAGGAGGCCAGTGAAATGGATGAAGAGGAAGAAGAAGAGGGTGAGAACGGCGAAGAAGATACTTATGAGGAAGAAGAGCGTATAGCTCAAATGGAATTAAGACAAAAGGCAGAGGCTCGCATGGCCGAAGATAAGGCCCGCCAGCATTTAATCAATGCTGGTGTACCTCTAGACTCCCTCAAAAGAAAACGCGAAATAGACAGCGCTGAGGACATGAATGTTTCTGCTTCACGCCGCATAAGTATTGATAAAAGTTCCGATTATGCTTTAGATAAACTAAAAGACATGGAAAATAGACCCTTGCCTTTTGGCTCAAACTTAGCCTCTTCGATTATAACTCACCATGATGATATGCCCGAACCAAATTCCTTAGACTTGCTGCAGAAGAGAGCTCAAGAAGTTTTGGATTCCGCCTCTCAGGGTATACTGGCCAATAATATGGCTGATGAGTTTGCATTCAAAGAGAAAAATGGCAAAGCTGGCAACGAGCCCTTCTTCAAACACAGATGTCGCTACTGTGGAAAAGTCTTTGGTTCGGACTCTGCTTTACAGATTCATATCAGATCTCATACAGGCGAACGACCTTTTAAGTGCAATGTTTGTGGTAGCAGATTTACTACGAAAGGAAATTTGAAAGTCCACTTTCAaagacacgcccacaaatttccCCACGTACCTATGAATGCCACACCCATACCAGAGCATCTGGACAAATTTCATCCTCCACTATTAGATCAAATGTCACCAGACAGTTCGCCCAGCCATACACCTGCCGCCATGCCACAACAAATGCCAAGTCAAATGCCATCCATGAATTTCCCAGGACCATCTAACAATTTTCCAGGACTAGCGAATCTCTACAGACCTCCCATGGATATTTTGCAGTCACTGTCTGCTTCTTCTGGAAGTGGCTTTAGCAATCCTTTCTTTTCCCAGATGTCTGGTAATTTGGGAGAAGCGGCCGTGCAGGCTCAAGCAGCGGCACAAGcagttttaagtaaaaatcaagaaattgcCACCGACTTGAGTAAAATCTCAGAGCCTAATTCTCCTGTAGACAAACACATAAAGTCAGAGATCTGCGAGGAAAAAGAAGCCGAACAAGAAAAAGTAGCAACCAAAACAACCTCTGAAACGGAAGCACCCAAAACATCATCACCCTTACCTGtggaaactaaaataaaagaagaaaaggaTGATTATGAAATTATGGAGGACAGAATACGTACTCCCTTGCCAGTTCTATCCACAAACAGTCCCGTCATTCCTGTGCATTCGCCTCTAACGAATTCCCTACCCCAAGTACCTAAAAGCCCGCCTGTATCCACCTCTAAACCACCCACCATTCAACAATTACCGCCGGTAGTACAACCCATACAACCACCCGCCATTCTGCATCCCCATCCCTCACCAGGCTCTCAACATCATCTGGATCATTTGCCAACTCCTGGACAGTTGCCACCCTCAATGCATCATCGTGAAGACTTCTTTGCCGAGCGCTTTCCTCTGAACTTTACGAAAACGCTGTCACCTGAAAGACACTCGCCTATAAGATCGCCCGCACACATACCGCGCGCTCCCTTCTTTAATCCCATGAAACCGCATGATATGGCCTTGTTGCCTCGTCCCCACAGCAACGATAATTCTTGGGAGAATTTCATAGAGATTTCTAATTCTTCGGAGACCATGAAGTTGAAGGAACTAATGAAGAATAAGAAAATAACCGATCCCAATCAATGCGTCGTATGCGATCGTGTTTTATCTTGCAAAAGTGCTTTGCAAATGCACTATCGCACTCATACGGGCGAGAGGCCATTCAAATGCCGCATTTGTGGTCGTGCCTTCACCACCAAAGGCAATTTGAAGACTCACATGGCTGTGCATAAAATAAGACCTCCCATGCGAAATTTCCATCAGTGTCCTGtgtgtcataaaaaatattcaaatgctTTAGTGCTGCAACAGCACATACGCCTGCATACCGGGGAGCCCACAGATTTGACTCCCGAACAAATCCAAGCAGCCGAAATACGAGATCCTCCACCATCCATGATGCCCGGAGCATTCATGAATCCCTTTGCCGCAGCTGCTTTTCACTTCGGCATGCCTGGAGGACCCGGCATGCATCCTTTAAGTGGTCTCCATAATGGTTTGGGCTCTGAGTCGTCACAGGGAGACTTTGATGACCAAATGGATTGCGGAGACGATTTTGATGACGACATGTCCTCAGACCATATGTCAAATAGCAATGATTTGGAACCAGGCAGTGAGAGACCGAAATCTACCGACGAATTCAAAGGCTTGTTGTTCGAACAAAAGCTAAGAATAGATCCCATTGGAGTGGTCAATACAAACCCTCGACCACAATCGGTCACTTCAAACCCGAATTCAATAAATTCTCCATCCACCAGCCCAACATCAGCCACAAAACCTTTAAGTTCGACACGAGCCACATCTCCGGCTAGATCGGAAATGTCTCAAGGAGCGCTAGACTTAACACCTCGTGCAGGGCCTTCATCCGCCAATAGCAGCATCAGCGCCAGATCACCATTGCCTATCAACATCAGTAAACGGACACCCTCGCCCATTACCAAATCACCGAAACTACCGCAAATCAGTCCCTCTGCCGCCATGCCACCCACATCTGCTGTAGATTGTCTGCCACCCAGTTTGCACCATCACTTgcagcaacaacatcaacaactaATGCAACAACAGGCTGCCTTAGCGGCCGCTCAACATCACCAGCAAATGCAGCACAATGCCGTCGTCGCCATGCATCAGGAACAACTAAGACGCGAAGCTGTTGCACATGCGCAACTATCGCCAAATGCTCCACAATCATCTTCACAGCAGCCACCATCAGGACAGTCGGTCACCTCACCACAAATACCACATCCCCAAGCGCCGAATCCATTGGTAGCAGCTGCCAGACCTCCATTTGGCATGTTTCCAAATCTCCCGCTGTTTCCACCGGCTTCCACACAAAACATGTGCACAGCCATGAATTCCATTGCACAGTCTGTTATGCCGGCGGCACCATTTAATCCTTTAGCTCTATCGGGAGTCAGAGGCAGCACTACTTGCGGCATTTGTTTCAAAACATTCCCCTGCCATTCGGCTTTGGAGATTCACTATAGAAGTCACACTAAAGAGAGACCATTTAAGTGTAATATTTGTGATCGCGGTTTTACAACAAAGGGCAATTTGAAACAACACATGCTTACCCACAAAATACGTGATATGGAACAGGAAACTTTCCGGAATAGAGCAGTCAAGTATaTGAGTGGTGGCAAAGAagattga
Protein Sequence: MCMHAATNQLSNSYSNGHSNKTKPKKGLKRLSHTYANRPKINKDAVASTASNSANDHEENGTCSPLAATTANEDNDCDRAELTHMVAGNEHVNKINTTPADAADKEQTCAPGPVTGEEDLNHNNNIVMPLEEQQQSLPQQQQQQQQQQQELKIPSPTLKEDLNAALAPSKTYPKDEEFPSPTPPDLNESQEPLRKAQEASEEAGEAEPSTQDDEKENLKTTDNMCLPSSKSEAANNKDQLSPQEKQEENENNQTSQMELEESPAAGNAEKALNKDLETDGMQLESTTPSLPASLAQQFGAAPVNIEAIKNMQLAIAQVAAKTIANGASGQDNEAAVKQLAFLQQTLFNLQQQQLFQIQLIQQLQSQLAMSQTKSKEEASEMDEEEEEEGENGEEDTYEEEERIAQMELRQKAEARMAEDKARQHLINAGVPLDSLKRKREIDSAEDMNVSASRRISIDKSSDYALDKLKDMENRPLPFGSNLASSIITHHDDMPEPNSLDLLQKRAQEVLDSASQGILANNMADEFAFKEKNGKAGNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAHKFPHVPMNATPIPEHLDKFHPPLLDQMSPDSSPSHTPAAMPQQMPSQMPSMNFPGPSNNFPGLANLYRPPMDILQSLSASSGSGFSNPFFSQMSGNLGEAAVQAQAAAQAVLSKNQEIATDLSKISEPNSPVDKHIKSEICEEKEAEQEKVATKTTSETEAPKTSSPLPVETKIKEEKDDYEIMEDRIRTPLPVLSTNSPVIPVHSPLTNSLPQVPKSPPVSTSKPPTIQQLPPVVQPIQPPAILHPHPSPGSQHHLDHLPTPGQLPPSMHHREDFFAERFPLNFTKTLSPERHSPIRSPAHIPRAPFFNPMKPHDMALLPRPHSNDNSWENFIEISNSSETMKLKELMKNKKITDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGAFMNPFAAAAFHFGMPGGPGMHPLSGLHNGLGSESSQGDFDDQMDCGDDFDDDMSSDHMSNSNDLEPGSERPKSTDEFKGLLFEQKLRIDPIGVVNTNPRPQSVTSNPNSINSPSTSPTSATKPLSSTRATSPARSEMSQGALDLTPRAGPSSANSSISARSPLPINISKRTPSPITKSPKLPQISPSAAMPPTSAVDCLPPSLHHHLQQQHQQLMQQQAALAAAQHHQQMQHNAVVAMHQEQLRREAVAHAQLSPNAPQSSSQQPPSGQSVTSPQIPHPQAPNPLVAAARPPFGMFPNLPLFPPASTQNMCTAMNSIAQSVMPAAPFNPLALSGVRGSTTCGICFKTFPCHSALEIHYRSHTKERPFKCNICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVKYMSGGKED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00045570;
90% Identity: iTF_01399775;
80% Identity: -