Basic Information

Insect: Nowickia ferox
Gene Symbol: -
Assembly: GCA_936446695.1
Location: CAKZFO010000086.1:7398067-7404835[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00075 0.074 14.5 1.3 1 23 47 69 47 69 0.98

2 16 2.9e-05 0.0028 19.0 2.8 1 23 79 101 79 101 0.99

3 16 4.9e-05 0.0048 18.3 0.5 1 23 107 129 107 129 0.93

4 16 2.7e-05 0.0027 19.1 0.5 1 23 135 157 135 157 0.97

5 16 0.00017 0.017 16.6 1.4 1 23 164 186 164 186 0.96

6 16 0.00053 0.052 15.0 5.0 1 23 192 214 192 214 0.97

7 16 9.2e-06 0.00091 20.6 4.8 1 23 220 242 220 242 0.99

8 16 0.013 1.2 10.7 0.3 1 23 248 270 248 270 0.98

9 16 0.0003 0.029 15.8 1.8 1 23 350 372 350 372 0.98

10 16 8.4e-06 0.00083 20.7 0.6 1 23 382 404 382 404 0.98

11 16 8e-06 0.00078 20.8 1.5 1 23 410 432 410 432 0.93

12 16 1.1e-05 0.0011 20.3 0.1 1 23 438 460 438 460 0.95

13 16 4.7e-05 0.0046 18.3 1.0 1 23 467 489 467 489 0.96

14 16 9.6e-08 9.4e-06 26.8 1.1 1 23 495 517 495 517 0.98

15 16 2.6e-06 0.00025 22.3 3.5 1 23 523 545 523 545 0.99

16 16 0.07 6.9 8.3 0.3 1 23 551 573 551 573 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00075	0.074	14.5	1.3	1	23	47	69	47	69	0.98
2	16	2.9e-05	0.0028	19.0	2.8	1	23	79	101	79	101	0.99
3	16	4.9e-05	0.0048	18.3	0.5	1	23	107	129	107	129	0.93
4	16	2.7e-05	0.0027	19.1	0.5	1	23	135	157	135	157	0.97
5	16	0.00017	0.017	16.6	1.4	1	23	164	186	164	186	0.96
6	16	0.00053	0.052	15.0	5.0	1	23	192	214	192	214	0.97
7	16	9.2e-06	0.00091	20.6	4.8	1	23	220	242	220	242	0.99
8	16	0.013	1.2	10.7	0.3	1	23	248	270	248	270	0.98
9	16	0.0003	0.029	15.8	1.8	1	23	350	372	350	372	0.98
10	16	8.4e-06	0.00083	20.7	0.6	1	23	382	404	382	404	0.98
11	16	8e-06	0.00078	20.8	1.5	1	23	410	432	410	432	0.93
12	16	1.1e-05	0.0011	20.3	0.1	1	23	438	460	438	460	0.95
13	16	4.7e-05	0.0046	18.3	1.0	1	23	467	489	467	489	0.96
14	16	9.6e-08	9.4e-06	26.8	1.1	1	23	495	517	495	517	0.98
15	16	2.6e-06	0.00025	22.3	3.5	1	23	523	545	523	545	0.99
16	16	0.07	6.9	8.3	0.3	1	23	551	573	551	573	0.95

Sequence Information

Coding Sequence: ATGCTTGATGATGATATATTCGACGTTATTTGTATGGATGACAAAAAAGGTGATAATGTTAAAGATGATGCTAAATTTAACGACTTACATGCAGCAAAAAGTCCTGTCTTAAGCAAGGAAAGGAATAATAAAGCCCTATATCCGTGCAATAGAtgcaagagaaaattaaaaaacaaaatatcattATTGAAACATCAAGAGGTTCACGATAACAAAGACAACGATGGAAGGACATATGAATGTAATATTTGCACTAAAGTATTTCAAAAAGGAAACCATTTGAGGGAGCATCAGAGAACACACATTGGTGAACGACCTTATCTGTGTTCTGTGTGTGGCAAAGGATTTACATCGGCAGGGAGTTTAAAACAACATTCATTCCGCCATCTAGAGGAAAGGCAGTTCCCGTGCCCCGACTGTCCAAGATCGTTTCCCACCAAAACCGATATGCTCTCCCACCATTCTGTTCACAAGGCTAAACCAAGAAATCATATATGCGATGTTTGTGGTCGCGGATTTTACAAACCCTACTTGTTGAAACAACACAAAATGTATCACAACAATGAACGACCGTTTGCCTGTGAATTTTGTGATAAACgTTTTTGCACAAGTGAGAAGCAGAAACGTCATACTCGCATTCATACCGGTGAAAAACCATACAAATGTAGTTTTTGTGAAAGGTCTTATTGTCAATCAAGTGaattaatgaaacatttgcgTTCCCATTTGGGTGAAAATGTCTATCAATGCGAACTATGTCCACAAAAACTACCAACTGTAAAACTTTTGCGCAGCCATTTCGCAACGCACAAAAATGATGATGAAGAGACAAAAGAACGAAATTTAGCTGCTTTAAATGCATTGGAAATGAAAGGAATAAACACTGAAATAAGTGATAAGTCTAAAATTCTTAAAAGAGAAGAGTTTGACGATGAAGTATTTGAACCAGTTACatatgacgatgatgaagatgttgTTAAAGACgacgacgatgatgatgatgaatatGAGCATTTCAATACGAAACAAATTACCGTGGAGCAACAATATCCTTGTGACAGATGTAAACGAAAATTGAAATCGAAACTATCTTTAAAAAGACATATGGAAATGCACACAAAACGTGATAATGAGGAGCCAAAATTTATGTGCAATATTTGCGACAGaggGTTTTCACAAGGTTACATGCTGAAAGACCATCTACGCTCGCATAGTGGTGAAAGGCCATATTTATGTTCGGAGTGCGGCAAGTCCTTCACGTCATCCGGCAGTTTAAAACAACACTCATTCCGCCATCTAAATGAGAAACAATTCCCCTGTCCAGACTGTCCAAAATCTTTTCCCACTAGGACTGATTTGGCATCCCATTCTGATGTCCATAATGCAAGACCCAGAACACATGTTTGCGATATCTGCGGACGAGGTTTCCCTAAAccgtttcttttaaaaaaacataaaatgtatCACACTAACGACAGGCCGTTTTCTTGCGAATACTGCGGTAAACGtttTGTAACTAATGAGAAACTACAACGTCACGTGAGAATCCATACTGGCGAAAAGCCATACAAATGCAGTTATTGCGAAAAAGCCTACTGTCAGTCTAATGAATTAACCAAACATTTAAGAATTCATTTGGGTGATAATGTATATCAATGCGAATTGTGTCCTCTAAGATTTCCCACAGTCAAAGTAGTTCGAGAGCATTTCTCTACACACAAAAACGACGATGCAGAAACTAAAATTCGCAATTTGGCAGAACTCAATGCTTTGACATTAAAAGGAATTTATTGcagataa
Protein Sequence: MLDDDIFDVICMDDKKGDNVKDDAKFNDLHAAKSPVLSKERNNKALYPCNRCKRKLKNKISLLKHQEVHDNKDNDGRTYECNICTKVFQKGNHLREHQRTHIGERPYLCSVCGKGFTSAGSLKQHSFRHLEERQFPCPDCPRSFPTKTDMLSHHSVHKAKPRNHICDVCGRGFYKPYLLKQHKMYHNNERPFACEFCDKRFCTSEKQKRHTRIHTGEKPYKCSFCERSYCQSSELMKHLRSHLGENVYQCELCPQKLPTVKLLRSHFATHKNDDEETKERNLAALNALEMKGINTEISDKSKILKREEFDDEVFEPVTYDDDEDVVKDDDDDDDEYEHFNTKQITVEQQYPCDRCKRKLKSKLSLKRHMEMHTKRDNEEPKFMCNICDRGFSQGYMLKDHLRSHSGERPYLCSECGKSFTSSGSLKQHSFRHLNEKQFPCPDCPKSFPTRTDLASHSDVHNARPRTHVCDICGRGFPKPFLLKKHKMYHTNDRPFSCEYCGKRFVTNEKLQRHVRIHTGEKPYKCSYCEKAYCQSNELTKHLRIHLGDNVYQCELCPLRFPTVKVVREHFSTHKNDDAETKIRNLAELNALTLKGIYCR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -