Nfer000465.1
Basic Information
- Insect
- Nowickia ferox
- Gene Symbol
- lov
- Assembly
- GCA_936446695.1
- Location
- CAKZFO010000003.1:34060-54741[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.8e-18 1.1e-14 54.9 0.0 1 44 825 868 825 869 0.96
Sequence Information
- Coding Sequence
- ATGCTAAAGGAATCAGAGGAAATCATTAAAAGGCGCAAACTGTCGTTAACGGCAGATACTGCGTCATACGAAGGAATAAATCTTAACGGAGCCTTAACCGACATCATTATACCACCTTATACACCACGCACACCTTTCACCAACACCATGGCTTTGGAGACGGAATGCTCGGAAGCCTTAGCTCTGACTACCACCACTTCAGCTACAGCGCCCATTTCAACACAAAATATGACCAATGCCACAAATGCCgcatccacagattttaatggACTCACAGCCGAGAATATGGTGAATGCTTTGCTGGCCAATAATGTCACCACCAAACCGGCTGCCTCTATACCTGACCATTACAGCTTAAGATGGAATAATCATCAGAACCATTTGACGCGTGCTTTCGATGGTCTGCTGCAAACAAAAACATTGGTCGATGTTACTCTGGTGTGTGCTGAAACCAGTATACGCGCCCATAAAATGGTCTTATCAGCCTGCTCGCCCTTCTTTCAGCGTGTATTTGCCGATACACCCTGCAAGCATCCGATTATTGTGCTCAAAGATTTTCGTGGTTGGGTAGTGCAAGCCattattgattttatgtatcGCGGTGAAATAAGCGTGCCCCAAGAAAAGCTGCACACGTTAATAGATGCTGGAGAATGCCTGCAAGTGCGCGGTTTAGTGGAAAGTTCCATACCCGAGCACACTCCCACACCTGCTGCTTCGCCCAATGACTTCAGCCTAATCGATGCGTCGTTgttgtcttcagaattggaaagATGTTCCAGTTTTGATGAAGAATCTCCTTCCATGGTTACTGCAGGCTCGAAAATCATATTGCCTTCACGTTTATTTAGCTCCTCATATAGACGTGATAAGGAACAACGAAAAAGGGAGAGAGAACGTGATTTGGAACATGATTTGGAAAGTGACCACGAAGTGCTAAATGATTCTGTCACTCACAATGACTTGTGCACATCGCCCATGCCCAGAAGAAAACAGGCCAGACCTAGAAGAAGATCAGGTGAATTAAGCCATGAGATAATTAACAAACCAGCAACAGATTCTAGCGAGCAACCTCAAGATCTTTGTAAAGACTCAAAAAAACAGGAACTCAAAGAAAACAGCCCTGCAAGAGTAATAGAAGCCGCAAATGAAAGCACATTAAAAACTGTGATCAAATCTGAGCAAGCAGAACCCATGGAGGAAGAGCAGGAGGAGCAAGAGGAGCAGGAGGAGGAGGACCAGGTGGGTGAACGTGATAGTGGCAATGATAGTCATGAGCAACCTGAAGATCTAGTTATAAACGATAAAAATCTGAATGTGGATAATAATTTAGACTTTACGAACAATACCTCACAATTGGCGGCTTTAAACTCTACGGAGGCAATAGCAGAAGAAGAGGAAGGAAGAGATAGGGATGAAGAGCCAGtagaggaggaggaggaggaggaagaagaagaagaggaaGAGGACATAGAGCAACTGATACATCATACGAATGAGTTAAATAGAAGACGCAAATCAGCCTTGTCCATGAACTCGGAGGGACCAGAGGATTTGTGCACCACCAAAAAAGACAACGACACTAGTGGTCATCATTCAGCCTCTGATAATGAAGACTCTAGCAATAATAACAATAGCAGTAAATTAACCAACAACAATCGCTTAGTATTATCCCTTAAGGACATACGTCAATTAAATAAACCATCCTCCTCATCAACTCCCAACTCTTCAGCCAATTGCATGAATCCTTTTTCCACGGCCAGCCTCAGAGACCTGCGTTTAGATCGAGATCGGGCCATGGAAACACATTGCAAAATGGAGGTACTGGAAGCTCAAATGCAGGCAGCTGCAGAAGCAGCCGCCGCGGCTGCAGCCCGAGGTGAAAATCCCTTCCAGCACATGGAACATCAAATGGATCTGTCATTAGCTGCCGCTGCAGCTGCGGCCGCAGTCTCTCAACAGCACTCACGAGAAAGAGATCAGGCCTTGCAAAGAGAACAACGAGAAATGCAACAACATAACGCCTACGCAAACAGCATCCTGGGGCAAATAGGTATGCCTGGAATACCGCCCTTCGGACCCGGCCCCGGAGGACCTTCATGTCCTGGCGGTCCCTCTGCTCATGAACGCTTGGAAGAGTCCATGAATCGCTTAAGCAAAGAGTTTACGCCCACATCGCCAATGAGCCTGCCACCCCACTACAATCCTCAAGATGGTCCGCCACATCCTCCCTCACCCCTGCCCTTTCCTGGTATGTCATCATTGGCGCTAACTCCGCCGCACATGTTTGGCTTAGACTCGCCTTTGGGCTTATTTCCACCTGGCATAGATCCTGGCAAATTATATAATCCGCTTATGGAAATGTCCGATCCTAGAGGTATGCCAGGAGATGCGCCGCCGTTCCTGAAAAAGAAAAtgccTAGACCAAAAGGTCAACATTCGGCACCAAGAGGCGGACCACCACGCTCCTGGACAAATGCCGAATTAACGGAGGCCCTACAGCATGTGTGGAATAAGAAAATGACCACTTCGCAAGCTTCACGCATCTTTGGCATACCCTATAATTCCCTTTTAATGTATGTTCGTGGCAAATATGGCAAATCTTTGAAATTGGAGCAATTGCGCAAGGATTGCATAAGCGGACCACCTTTAGAGATGCTGCAAATGGGCATAAACTCAAGCAAAGAGACTAAGGAGCAAAGAGAAGCACGCAAAGAGGCTCAGCGTAATGCCAACCAACATCCGCCAAGCGACTTGGATTTGGGTGGTCCTTTGACGGGACCAGGACCGCGACCCGCCAGCTCTGAACCAGATCTATTATCCGGCCCTAATGCTTTGTTCAATCCCTTCAATCCTCAAGGTTTCTATCCCGACTTTCCTGGAGGATTTCCTGGTTTACCTTTAAGTATGCTAAACTTATTGCCACCCTCGGAGAGACAACATGCAGCTGCTGCAGCCGCAGCCATGCATCATGTATCTATGGGCCTGGATGAGGACTGCAAGTCCGATCGTTCGAAACATTCCTCCAATATGGACGACGAATTCTCGCTGGGTCGTGAAGAACGCCGGCATTCGGATATAATGAACAATTCCTCGACACCCTTAGCTTCTGCGCAGCAAAATGGTTTGGTGCAAGATTGA
- Protein Sequence
- MLKESEEIIKRRKLSLTADTASYEGINLNGALTDIIIPPYTPRTPFTNTMALETECSEALALTTTTSATAPISTQNMTNATNAASTDFNGLTAENMVNALLANNVTTKPAASIPDHYSLRWNNHQNHLTRAFDGLLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFADTPCKHPIIVLKDFRGWVVQAIIDFMYRGEISVPQEKLHTLIDAGECLQVRGLVESSIPEHTPTPAASPNDFSLIDASLLSSELERCSSFDEESPSMVTAGSKIILPSRLFSSSYRRDKEQRKRERERDLEHDLESDHEVLNDSVTHNDLCTSPMPRRKQARPRRRSGELSHEIINKPATDSSEQPQDLCKDSKKQELKENSPARVIEAANESTLKTVIKSEQAEPMEEEQEEQEEQEEEDQVGERDSGNDSHEQPEDLVINDKNLNVDNNLDFTNNTSQLAALNSTEAIAEEEEGRDRDEEPVEEEEEEEEEEEEEDIEQLIHHTNELNRRRKSALSMNSEGPEDLCTTKKDNDTSGHHSASDNEDSSNNNNSSKLTNNNRLVLSLKDIRQLNKPSSSSTPNSSANCMNPFSTASLRDLRLDRDRAMETHCKMEVLEAQMQAAAEAAAAAAARGENPFQHMEHQMDLSLAAAAAAAAVSQQHSRERDQALQREQREMQQHNAYANSILGQIGMPGIPPFGPGPGGPSCPGGPSAHERLEESMNRLSKEFTPTSPMSLPPHYNPQDGPPHPPSPLPFPGMSSLALTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRGMPGDAPPFLKKKMPRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPLEMLQMGINSSKETKEQREARKEAQRNANQHPPSDLDLGGPLTGPGPRPASSEPDLLSGPNALFNPFNPQGFYPDFPGGFPGLPLSMLNLLPPSERQHAAAAAAAMHHVSMGLDEDCKSDRSKHSSNMDDEFSLGREERRHSDIMNNSSTPLASAQQNGLVQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00922026;
- 90% Identity
- iTF_01074604; iTF_01399379; iTF_01399591; iTF_01398620; iTF_01398407; iTF_01397344; iTF_01397580;
- 80% Identity
- iTF_01074604;