Nfer025324.1
Basic Information
- Insect
- Nowickia ferox
- Gene Symbol
- retn
- Assembly
- GCA_936446695.1
- Location
- CAKZFO010000254.1:614273-620762[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.8e-15 2.2e-11 45.0 0.0 7 79 171 241 163 242 0.88
Sequence Information
- Coding Sequence
- ATGTTATTACATTTGCAACAAAATCCACAACATAAGCAAAACATATTAAAAGTTCCTCAACCAGATTCAGATCCAAAGGGCAACACTGCAGCAATTTCATCAGCAtctgcaacagcagcaacaacacaaATCTGTCATGTTAGCTACAGCGAAGGGATAATAAAATTAGCTGACGGCCTTAATACTCTGCAAAATACATTCCTGGGCTGGATCGTAGGTGGCTCAAAGCAACAAACTATTAACTCAAATTCATTATCGCCAGATACATGTGCCATATTTGGCGATGATTCAACACTAGAACAAAACATTGAACAGCTTTGGAAATTAGACCAAATAGAATCCGCTGAGAAAATTATGTCTCCATCAGAAGAACAGTGCGAAGCCCATTTTATTCACAAAACTAAAACTATCAAACATAATCGTTTCATTGTTAGCCTTCCATTTCGCGAAAATCCATCTGTATTGGGTGATTCGCATGCCATTGCTTACAACAGATTCCTTAGCTTAGAAAAACGACTACAAGAGAATGAGAGCATTCGAAGCACACCCATCAATCGTTTGCCAATAATGGCTAAATCAGTATTGGATCTTTATGAACTGTACAATTTAGTGATTGCAAGAGGAGGTCTTGTGGATGTCATTAACAAAAAGCTGTGGCAAGAAATTATAAAGGGACTTCATCTGCCATCGAGTATAACAAGTGCAGCATTCACTTTACGTACACAGTAA
- Protein Sequence
- MLLHLQQNPQHKQNILKVPQPDSDPKGNTAAISSASATAATTQICHVSYSEGIIKLADGLNTLQNTFLGWIVGGSKQQTINSNSLSPDTCAIFGDDSTLEQNIEQLWKLDQIESAEKIMSPSEEQCEAHFIHKTKTIKHNRFIVSLPFRENPSVLGDSHAIAYNRFLSLEKRLQENESIRSTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -