Basic Information

Gene Symbol
NFX1
Assembly
GCA_905147325.1
Location
LR990168.1:10135735-10151220[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 1 2.1e+04 -4.5 1.6 15 19 422 426 421 426 0.81
2 16 0.022 4.6e+02 1.2 1.2 2 10 454 462 454 462 0.93
3 16 6.3e-05 1.3 9.3 19.5 4 19 470 485 468 485 0.93
4 16 4.5e-08 0.00095 19.4 12.1 1 19 521 539 521 539 0.97
5 16 0.00024 5 7.5 9.9 1 19 580 598 580 598 0.97
6 16 2.3e-05 0.49 10.7 12.3 1 19 639 661 639 661 0.87
7 16 1 2.1e+04 -5.4 2.2 6 10 691 695 691 695 0.94
8 16 0.0084 1.8e+02 2.5 7.3 1 11 701 711 701 712 0.93
9 16 0.029 6.1e+02 0.8 0.4 4 10 716 722 715 723 0.93
10 16 0.0012 24 5.3 7.6 3 13 730 740 728 741 0.88
11 16 1.9e-07 0.0041 17.3 10.0 4 19 821 836 819 836 0.96
12 16 1.9e-07 0.0041 17.3 10.0 4 19 904 919 902 919 0.96
13 16 3.2e-06 0.068 13.4 14.4 3 19 1043 1059 1041 1059 0.92
14 16 0.029 6.1e+02 0.8 16.8 1 18 1098 1114 1098 1115 0.81
15 16 2.1e-08 0.00044 20.4 14.0 1 17 1151 1169 1151 1175 0.83
16 16 8.8e-05 1.9 8.9 5.5 1 13 1181 1192 1181 1193 0.95

Sequence Information

Coding Sequence
ATGTCTCAGTGGAACAACACATACGCTTACAACAACCAGTATCAAGGCTGGAACGGCGACCCCAACTGCCAGTACCCTAACCAAGGTTACTATCCCAATAGGACAGACCCTCCAAATCAATATGTGAGCTTTAACGAGTTCCTGTCCCAAATGCAGACCAACGGAGGGACTAGCACCGCCGCCTATAACAATGTGCAGTATGAGAATTACCCTTCAAACCAGTATAACTATCAGAATGCGCCCTCCACCTCCCAACCACTTCAAAATTCGCAAGAGAATTACAGGTATGCTGTAAGCACACAGAACATCCCCAATGATGGAGAGGCCTATCAAGCAAATCCACAAAGCCAATACAACTCAGTGTTACAAGACCCAAACGTCTACACAAATGATATGATACTTAAGTCTAATCTCACACCTACAGCGGTGGAGTTTGTACCAAAAAGTTCAGTTAGCAAACCATCAAGCAGTAGCCACAACATTCCGGAAGCATCTAGCACACAAAATGACGTAACTGAAACTAGAAATATTAGTAATTCGTCAGAAACAAACTGGAGAGAAAGGCCTCATAGTTCTCAGCAAAGGAACGAGACTGAGTATAGAAATGAATCAAACCATCGCCAAGAAACTTATAGGAACCAGGAGTCAGGCCGCAACAGAGACTCAAATTATAGGAATAATGAATCAAATAGATATGAGTCCAATAATCGTAATCAGGAATCTAATCGTAACTACGAATCTAGCAACAAAAGGGGCCAAAATAAAGTTAATCCTAAGTCGAAGAATAAGGATGTGGATGTTCGTACTTTTTATAATAGTTCTATGAGCAAAGACAGCCAGGATGTTAGGAACGGTAGGGGGGAAGGGTCAGGGCGGCACAAAAACTGGGTCGGTTCCCAACGACTTAGAGCATTGGAGCGTAACAGCACAGAAGATGAACAATACGCCAATACTTATACACAGCAGAAAGAGGAGAAAACTGAGAGAGAATCTAGAGTTGTGAAGACAGAAAAAGTTTCCAGTCCAGCTCGGTTTAAAAACAAACATAGTGAGCAAGCTGTTATTATTTCAGTAAACACAGAGATGACGCAACGGGAGCGTCTGTCAGAGCAACTGGATAAAGGAACGCTGGAATGCCTGGTGTGCTGCGAGCGAGTGAAGCAGACAGACCCGGTGTGGTCGTGCGGGAACTGCTACCATGTGCTGCATCTGAGGTGCATTAGGAAGTGGGCCATGAGCAGTATGGTTGAAGGCAAATGGCGTTGCCCGGCGTGCCAGAACACGAACGAGGCCATCCCCACGGAGTACCGCTGCATGTGCGGCGCCGTGCGCGCGCCCGAGCACCAGCGCGGCGCGGCGGGCGCGCACACGTGCGGCCGCGCCTGCCGCCGCGCGCGCGCCTGCCCGCACCCCTGCGCGCTGCCCTGCCACCCCGGGCCCTGCCCGCCCTGCCAGGCCACCGTCGCCAAACAATGCGGGTGCGGCGCGGAGACCCGCTCGGTGCTCTGCAGCAGCAAGCTGCCGCAGGTGTGCGGGCGCGTCTGCGGCCGCGCGCTCGAGTGCGGCGTGCACAAGTGCGCCAGCGACTGCCACGAGGGACCCTGCGACAATTGCACTGAGATTGTCACACAAGTGTGCTACTGCCCGGCGGGCAAGTCGCGGTCGGTGGCGTGCTCGGCGGAGAGCGGCGCGCGCGCGCAGTGGGAGTGCTCGGGCGCGTGCGGGCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCGCGCGCTGCCACGCGCCGCCCTGCCGCGCCTGCCGCCTGCTGCCCGCGCACGTGCTCACCTGCCCCTGCGGACAGACCCGTTTGGACAAGGACTCGCGCAAATCGTGCACGGACCCGATCCCGCTATGCGGCAACATCTGCGCCAAGCCGCTGCCGTGCGGGCCCGCCGGCGACAAGCACTTCTGCAAGATTGACTGCCACGAAGGTCCGTGCCCCACTTGCCCCGACAAGACAGTCCTGCAGTGCCGCTGCGGGCACTCGAGCCGCGAGGTGCCGTGCGCAGACCTGCCCGACATGTACAACAACGTGCTGTGCCAGAAGAAGTGCAACAAGAAGCTGTCGTGCGGGCGGCACCGATGCCGCACGGCTTGCTGCGCGGCCACCACGCACCGCTGCGCCGTGGTGTGCGGCCGCTCGCTGCCGTGCCAGGCGCACCGCTGCGAGGAGTTCTGCCACACCGGCCACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGTGGTGTGCGGCCGCTCGCTGCCGTGCCAGGCGCACCGCTGCGAGGAGTTCTGTCACACCGGCCATTGCGCGCCCTGCCCGCGCGTCAGCGCACCGCTGCGAGGAGTTCTGCCACACCGGCCACTGCGCGCCCTGCCCGCGCGTCAGTGAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGCTCGCTGCCGTGCCAGGCGCACCGCTGCGAGGAGTTCTGCCACACCGGCCACTGCGCGCCCTGCCCGCGCGTCAGCGCACCGCTGCGAGGAGTTCTGCCACACCGGCCACTGCGCGCCCTGCCCGCGCGTCAGTGAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGCTCGCTGCCGTGCCAGGCGCACCGCTGCGAGGAGTTCTGCCACACCGGCCACTGCGCGCTCTGCCCGCGCGTCAGCGCACCGCTGCGAGGAGTTCTGTCACACCGGCCATTGCGCGCCCTGCCCGCGCGTCAGTGAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGCTCGCTGCCGTGCCAGGCGCACCGCTGCGAGGAGTTCTGCCACACCGGCCACTGCGCGCCCTGCCCGCGCGTCAGTTTCGACGAGTTGACGTGCGAGTGCGGCGCGGAAGTGATCCTGCCGCCGGTGCGCTGCGGCACGCGGCCGCCGCCGTGCGGCGCGACCTGCCGCCGCCGGCGGCCCTGCGGACACCCGCCGCACCACTCCTGCCACGCCGGGGACTGCCCGCCCTGCGTCGTGCTCACCACCAAGCGCTGCCACGGAGACCACGAGGAAAGAAAAACGATTCCATGCTCGCAAGACGAGTTCTCGTGCGGGCTCCCGTGCGGCAAGCCGCTGCCGTGCGGCAAGCACACCTGCATCAAGACGTGCCACAAAGGCCCCTGCGACACCGGCAAATGCACCCAGCCGTGCACTGAGAAGCGACCGAGCTGCGGGCACCCGTGCGCCGCCCCGTGCCACGTGGGGGCGGCGGGGGCGGGCGGGGCGGGGGCGGGGGCGGGCGGGGCGGGGGCGGGCGGCGCCTGCCCCAGCGCGGCCGCGTGCCGGCGGGCGGTGCGGGCCACCTGCCCGTGCGGCCGCCGCCACGCCGAGCGGCCCTGCTGCGACAACGCAAGGGACTACGCCAAGATGATGAGTGCTTTGGCAGCCACCAAGATGCAGGAAGGAGGCTCCGTTGATCTTTCAGATGTTCAACGCCCCGGCAGCATGCTGAAAACGCTGGAGTGCGACGACGAGTGCCGCGTGGAGGCGCGCACGCGGCAGATGGCGCTGGCGCTGCAGATCCGCAACCCGGACGTGTCGGCCAAGCTGGCGCCGCGCTACAGCGACCACGTGCGCGCCACCGCCGCGCGCGAGCCCGCCTTCGCGCACCAGATACACGACAGGCTCACCGAGCTCGTCCAGCTCGCCAAGAAGGTCAGCTTGTCCATGTACATCTGA
Protein Sequence
MSQWNNTYAYNNQYQGWNGDPNCQYPNQGYYPNRTDPPNQYVSFNEFLSQMQTNGGTSTAAYNNVQYENYPSNQYNYQNAPSTSQPLQNSQENYRYAVSTQNIPNDGEAYQANPQSQYNSVLQDPNVYTNDMILKSNLTPTAVEFVPKSSVSKPSSSSHNIPEASSTQNDVTETRNISNSSETNWRERPHSSQQRNETEYRNESNHRQETYRNQESGRNRDSNYRNNESNRYESNNRNQESNRNYESSNKRGQNKVNPKSKNKDVDVRTFYNSSMSKDSQDVRNGRGEGSGRHKNWVGSQRLRALERNSTEDEQYANTYTQQKEEKTERESRVVKTEKVSSPARFKNKHSEQAVIISVNTEMTQRERLSEQLDKGTLECLVCCERVKQTDPVWSCGNCYHVLHLRCIRKWAMSSMVEGKWRCPACQNTNEAIPTEYRCMCGAVRAPEHQRGAAGAHTCGRACRRARACPHPCALPCHPGPCPPCQATVAKQCGCGAETRSVLCSSKLPQVCGRVCGRALECGVHKCASDCHEGPCDNCTEIVTQVCYCPAGKSRSVACSAESGARAQWECSGACGRVLACGAHVCRARCHAPPCRACRLLPAHVLTCPCGQTRLDKDSRKSCTDPIPLCGNICAKPLPCGPAGDKHFCKIDCHEGPCPTCPDKTVLQCRCGHSSREVPCADLPDMYNNVLCQKKCNKKLSCGRHRCRTACCAATTHRCAVVCGRSLPCQAHRCEEFCHTGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPWCAAARCRARRTAARSSVTPAIARPARASAHRCEEFCHTGHCAPCPRVSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARCRARRTAARSSATPATARPARASAHRCEEFCHTGHCAPCPRVSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLAAVPGAPLRGVLPHRPLRALPARQRTAARSSVTPAIARPARASVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSLPCQAHRCEEFCHTGHCAPCPRVSFDELTCECGAEVILPPVRCGTRPPPCGATCRRRRPCGHPPHHSCHAGDCPPCVVLTTKRCHGDHEERKTIPCSQDEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQPCTEKRPSCGHPCAAPCHVGAAGAGGAGAGAGGAGAGGACPSAAACRRAVRATCPCGRRHAERPCCDNARDYAKMMSALAATKMQEGGSVDLSDVQRPGSMLKTLECDDECRVEARTRQMALALQIRNPDVSAKLAPRYSDHVRATAAREPAFAHQIHDRLTELVQLAKKVSLSMYI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-